New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3899624 | 61 (1.040) | 4 (0.070) | 3/252 | NT | 7.0% | coding (32/1620 nt) | PP_3443 | glyceraldehyde‑3‑phosphate dehydrogenase |
? | NC_002947 | = 3899652 | 47 (0.830) | coding (60/1620 nt) | PP_3443 | glyceraldehyde‑3‑phosphate dehydrogenase |
TTTTTCCTGCAGCCAGTGCATGCTCGTAGCTGAAACGATTCAACTGACTTGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGCCACGGTGCGCAGCCCGGTGTGGCTCAAGCAAGGCGACGAAGAGCATCAGGTCATACTGGGCAGCGCCCCGCTGCTG > NC_002947/3899510‑3899799 | tttttCCTGCAGCCAGTGCATGCTCGTAGCTGAAACGATTCAACTGACTTGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCctgg < 1:291865‑M2/147‑5 (MQ=255) ttCCTGCAGCCAGTGCATGCTCGTAGCTGAAACGATTCAACTGACTTGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGc < 6:189542/148‑1 (MQ=255) tCCTGCAGCCAGTGCATGCTCGTAGCTGAAACGATTCAACTGACTTGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGcc < 6:180243/148‑1 (MQ=255) cggCAGCCTGTGCTTGCTCGTAGCTGAATCGTTTCCACTGTCTGGTATACCGCCGTATGAGGTGTGGTGCAGTACCCATTGACCCTTTGCTCGATTCACTCTTCCCCAGCGCCGAGACCATCCGGGACCCCTGGCGCCTGGGTGcccc < 8:61942/146‑1 (MQ=255) ccAGTGCATGCTCGTAGCTGAAACGATTCAACTGACTTGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGaa < 4:321445/149‑1 (MQ=255) gTGCATGCTCGTAGCTGAAACGATTCAACTGACTTGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGaacaa > 7:75376/1‑149 (MQ=255) cATGCTCGTAGCTGAAACGATTCAACTGACTTGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAAcgc < 3:134543/149‑1 (MQ=255) tGCTCGTAGCTGAAACGATTCAACTGACTTGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGa < 6:131222/149‑1 (MQ=255) gCTCGTAGCTGAAACGATTCAACTGACTTGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTg < 7:349209/137‑1 (MQ=255) gCTCGTAGCTGAAACGATTCAACTGACTTGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTg > 8:349209/1‑137 (MQ=255) gTAGCTGAAACGATTCAACTGACTTGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTAcc > 1:84030/1‑149 (MQ=255) tAGCTGAAACGATTCAACTGACTTGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCt < 7:85874/149‑1 (MQ=255) aaaCGATTCAACTGACTTGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCaa > 7:169378/1‑149 (MQ=255) aaCGATTCAACTGACTTGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAAc > 1:352045/1‑149 (MQ=255) cGATTCAACTGACTTGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACgg < 3:107101/149‑1 (MQ=255) gATTCAACTGACTTGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGt < 8:169378/149‑1 (MQ=255) tCAACTGACTTGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGa < 2:11992/148‑1 (MQ=255) aCTTGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGgc > 3:71733/1‑149 (MQ=255) ttGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCctg < 3:255399‑M2/98‑4 (MQ=255) ttGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCctg > 4:255399‑M2/1‑95 (MQ=255) ttGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAgcgct > 8:211700/1‑145 (MQ=255) aaaaCCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTg < 8:75376/148‑1 (MQ=255) aaCCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGa < 2:84030/149‑1 (MQ=255) cGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACgg > 4:144270/1‑149 (MQ=255) gCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGa > 7:111642/1‑92 (MQ=255) gCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGa < 8:111642/92‑1 (MQ=255) ccgatagtgtgAGGTGCAGTACCCATGGACCGTTTGCGCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACCGGAACTACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGc < 7:128021/140‑1 (MQ=255) tgtgAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCCGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGc > 5:312752/1‑148 (MQ=255) gtgAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACCGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGc > 8:128021/1‑139 (MQ=255) gtgAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACCGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGCCa > 6:254915/1‑149 (MQ=255) taGGTGGAGTACCTATGGACCGTTTGCTATATTCACTCTTCCCCAGCTCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGCCAc < 4:211200/147‑1 (MQ=255) ggTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAAAATCCCGGAAACCTGGCGCCTGGGAGAACCACTCGAACAACGCGACTAACAGCTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATATGCCAc > 3:211200/1‑146 (MQ=255) aGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGCCACGGTGCGCa < 3:144270/149‑1 (MQ=255) tACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGCAACGGTGCGCAGc > 7:223316/1‑149 (MQ=255) tACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCACGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGCCACGGTGCGCAGc > 7:32303/1‑149 (MQ=255) aTGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGCCACGGTGCGCAGCCCGgt > 5:180893/1‑149 (MQ=255) aCCGTTTGCTCGATTCACTCTTCCCGAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGCCACGGTGCGCAGCCCGGTGTgg < 2:352045/149‑1 (MQ=255) aCCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGCCa > 4:154005/1‑129 (MQ=255) aCCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGCCa < 3:154005/129‑1 (MQ=255) ccGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTCGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGCCACGGTGCGCAGCCCGGTGTGGc > 7:245254/1‑149 (MQ=255) gCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGCCACGGTGCGCAGCCCGgtgt > 2:181507/1‑140 (MQ=255) gCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGCCACGGTGCGCAGCCCGgtgt < 1:181507/140‑1 (MQ=255) tCGATTCACTCTTCCCCCGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGCCACGGTGCGCAGCCCGGTGTGGCTcaagc > 4:328913/1‑147 (MQ=255) aTTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGCCACGGTGCGCAGCCCGGTGTGGCTCAAGCAAGGc < 4:71733/149‑1 (MQ=255) aCTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGCCACGGTGCGCAGCCCGGTGTGGCTCAAGCAAGGcgac > 8:335477/1‑148 (MQ=255) tctTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCctggggaagagtgaatcgagcaaacggtccatgggtactgcacctcacatcaaagggcggttttcaagtcagttgaatcgtttcagctacgagcatgcactggctgcagg < 1:285298‑M2/148‑111 (MQ=255) tctTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCctggggaagagtgaatcgagcaaacggtccatgggtactgcacctcacatcaaagggcggttttcaagtcagttgaatcgtttcagctacgagcatgcactggctgcagg < 3:69849‑M2/148‑111 (MQ=255) tctTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGCCACGGTGCGCAGCCCGGTGTGGCTCAAGCAAGGcgacg > 7:291154/1‑147 (MQ=255) ttCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGCCACGGTGCGCAGCCCGGTGTGGCTCAAGCAAGGCGACGaa < 2:291865/147‑1 (MQ=255) ccccAGCGCCGAGAACCTCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGCCACGGTGCGCAGCCCGGTGTGGCTCAAGCAAGGCGACGAag < 8:245254/146‑1 (MQ=255) ccAGCGCCGAGAACATCCCGGAAACCTGGCGCctggggaagagtgaatcgagcaaacggtccatgggtactgcacctcacatcaaagggcggttttcaagtcagttgaatcgtttcagctacgagcatg > 6:308342‑M2/1‑32 (MQ=255) ccAGCGCCGAGAACATCCCGGAAACCTGGCGCctggggaagagtgaatcgagcaaacggtccatgggtactgcacctcacatcaaagggcggttttcaagtcagttgaatcgtttcagctacgagcatg < 5:308342‑M2/129‑98 (MQ=255) cAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGCAACGGTGCGCAGCCCGGTGTTGCTCAAGCAAGGCGACGAAGAGCAt > 2:301579/1‑148 (MQ=255) aGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGCCACGGTGCGCAGCCCGGTGTGGCTCAAGCAAGGCGACGAAGAGCAt > 5:366646/1‑147 (MQ=255) ccGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGCAACGGTGCGCAGCCCGGTGTGGCTCAAGCAAGGCGACGAAGAGCATCAGGTc < 8:223316/149‑1 (MQ=255) gagaACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCA‑GCGCTGGGACGGCCCATTGGCCACGGTGCGCAGCCCGGTGTGGCTCAAGCAAGGCGACGAAGAGCATCAGGTCATa < 7:211700/149‑1 (MQ=255) agaACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGCCACGGTGCGCAGCCCGGTGTGGCTCAAGCAAGGCGACGAAGAGCATCAGGTCATa < 6:366646/149‑1 (MQ=255) cTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGTTGAGCTCAGGCGCTGGGACGGCCCATTGGCCACGGTGCGCAGCCCGGTGTGGCTCAAGCAAGGCGACGAAGAGCAGAAGGTCATACTGTGCAGCGCCCCgc > 6:375844/1‑149 (MQ=255) gcCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGCCACGGTGCGCAGCCCGGTGTGGCTCAAGCAAGGCGACGAAGAGCATCAGGTCATACTGGGCAGCGCCCCGctgctg < 6:312752/149‑1 (MQ=255) ccTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGCCACGGTGCGCAGCCCGGTGTGGCTCAAGCAAGGCGACGAAGAGCATCAGGTCATACTGGGCAGCGCCCCGctgctg > 2:191057/1‑148 (MQ=255) | TTTTTCCTGCAGCCAGTGCATGCTCGTAGCTGAAACGATTCAACTGACTTGAAAACCGCCCTTTGATGTGAGGTGCAGTACCCATGGACCGTTTGCTCGATTCACTCTTCCCCAGCGCCGAGAACATCCCGGAAACCTGGCGCCTGGGAGCCCCACTGGAACAACGCGACTACCTGGTCAACGGTGAGCTCAGGCGCTGGGACGGCCCATTGGCCACGGTGCGCAGCCCGGTGTGGCTCAAGCAAGGCGACGAAGAGCATCAGGTCATACTGGGCAGCGCCCCGCTGCTG > NC_002947/3899510‑3899799 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |