New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4095364 | 44 (0.750) | 8 (0.140) | 7/248 | NT | 15.7% | coding (120/765 nt) | PP_3603 | GntR family transcriptional regulator |
? | NC_002947 | = 4095423 | 44 (0.790) | coding (61/765 nt) | PP_3603 | GntR family transcriptional regulator |
GCACGAATGTACCGATGCCGTGGCGAGTCTCTACCTGCCCGGCGGCCTGCAACCGCGAGATCGCCTCACGCACCACCGTGCGACTGACGCCCTCTTCGGCCATGATCTGCGATTCGGTCGGCAGCTTGTCGCCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4095228‑4095364 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcgcAGTCTGGCCCAGGAACTGGTCACGGTGCTGACCGAACGCATTCGCAGCGGCCAGCTCAAGCGCGGCGACAAGCTGCCGACCGAATCGCAGATCATGGCCGAAGAGGGCGTCAGTCGCACGGTGGTGCGTGAGGCGATCTCGCGGTTG < NC_002947/4095423‑4095277 GCACGAATGTACCGATGCCGTGGCGAGTCTCTACCTGCCCGGCGGCCTGCAACCGCGAGATCGCCTCACGCACCACCGTGCGACTGACGCCCTCTTCGGCCATGATCTGCGATTCGGTCGGCAGCTTGTCGCCGCGCAGTCTGGCCCAG > 4:362411/1‑149 GAATGTACCGATGCCGTGGCGAGTCTCTACCTGCCCGGCGGCCTGCAACCGCGAGATCGCCTCACGCACCACCGTGCGACTGACGCCCTCTTCGGCCATGATCTGCGATTCGGTCGGCAGCTTGTCGCCGCGCAGTCTGGCCCAGGAAC > 5:151419/1‑149 GTGGCGAGTCTCTACCTGCCCGGCGGCCTGCAACCGCGAGATCGCCTCACGCACCACCATGCGACTGACGCCCTCTTCGGCCATGATCTGCGATTCGGTCGGCAGCTTGTCGCCGCGCAGTCTGGCCCAGGAACTGGTCACGGTGCTGA > 8:239618/1‑149 CTGCCCGGCGGCCTGCAACCGCGAGATCGCCTCACGCACCACCGTGCGACTGACGCCCTCTTCGGCCATGATCTGCGATTCGGTCGGCAGCTTGTCGCCGCGCAGTCTGGCCCAGGAACTGGTCACGGTGCTGACCGAACGCATTCG > 8:335343/1‑147 CCGCGAGATCGCCTCACGCACCACCATGCGACTGACGCCCTCTTCGGCCATGATCTGCGATTCGGTCGGCAGCTTGTCGCCGCGCAGTCTGGCCCAGGAACTGGTCACGGTGCTGACCGAACGCATTCGCAGCGGCCAGCTCAAGCGCG < 7:239618/149‑1 CGCGAGATCGCCTCACGCACCACCGTGCGACTGACGCCCTCTTCGGCCATGATCTGCGATTCGGTCGGCAGCTTGTCGCCGCGCAGTCTGGCCCAGGAACTGGTCACGGTGCTGACCGAACGCATTCGCAGCGGCCAGCTCAAGCGCGG < 6:151419/149‑1 GCGAGATCGCCTCACGCACCACCGTGCGACTGACGCCCTCTTCGGCCATGATCTGCGATTCGGTCGGCAGCTTGTCGCCGCGCAGTCTGGCCCAGGAACTGGTCACGGTGCTGACCGAACGCATTCGCAGCGGCCAGCTCAAGCGCGGC < 3:362411/149‑1 GCGAGATCGCCTCACGCACCACCGTGCGACTGACGCCCTCTTCGGCCATGATCTGCGATTCGGTCGGCAGCTTGTCGCCGCGCAGTCTGGCCCAGGAACTGGTCACGGTGCTGACCGAACGCATTCGCAGCGGCCAGCTCAAGCGCGGC < 7:335343/149‑1 CCGCGCAGTCTGGCCCAGGAACTGGTCACGGTGCTGACCGAACGCATTCGCAGCGGCCAGCTCAAGCGCGGCGACAAGCTGCCGACCGAATCGCAGATCATGGCCGAAGAGGGCGTCAGTCGCACGGTGGTGCGTGAGGCGATCTCGCG < 6:64277/149‑1 GCAGTCTGGCCCAGGAACTGGTCACGGTGCTGACCGAACGCATTCGCAGCGGCCAGCTCAAGCGCGGCGACAAGCTGCCGACCGAATCGCAGATCATGGCCGAAGAGGGCGTCAGTCGCACGGTGGTGCGTGAGGCGATCTCGCGGTTG < 3:115244/149‑1 GCACGAATGTACCGATGCCGTGGCGAGTCTCTACCTGCCCGGCGGCCTGCAACCGCGAGATCGCCTCACGCACCACCGTGCGACTGACGCCCTCTTCGGCCATGATCTGCGATTCGGTCGGCAGCTTGTCGCCGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4095228‑4095364 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcgcAGTCTGGCCCAGGAACTGGTCACGGTGCTGACCGAACGCATTCGCAGCGGCCAGCTCAAGCGCGGCGACAAGCTGCCGACCGAATCGCAGATCATGGCCGAAGAGGGCGTCAGTCGCACGGTGGTGCGTGAGGCGATCTCGCGGTTG < NC_002947/4095423‑4095277 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |