| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4260580 | 56 (0.950) | 3 (0.050) | 3/248 | NT | 5.2% | coding (2182/2460 nt) | PP_3734 | ABC transporter permease |
| ? | NC_002947 | = 4260613 | 56 (1.000) | coding (2149/2460 nt) | PP_3734 | ABC transporter permease | |||||
ACGGGGAACACATACAGCGGTAAACGCCAGCCGAAGGCCTGCACGTTCACCACTGCGACCAGGCACCAGGCCAGCAACAGCCCAAGCGGAATCGCCAGCAGTACGGTGAAGCCGCTGAGCATGAGTGTCTGCCCCAGGCTCAACCAGACCAGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4260426‑4260580‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagttgGCACCGCTGTGGGCACTGGGGGTGCGGCGCATGCAACTGGTCTGGTTGAGCCTGGGGCAGACACTCATGCTCAGCGGCTTCACCGTACTGCTGGCGATTCCGCTTGGGCTGTTGCTGGCCTGGTGCCTGGTCGCAGTGGTGAACGTG < NC_002947/4260613‑4260467 ACGGGGAACACATACAGCGGTAAACGCCAGCCGAAGGCCTGCACGTTCACCACTGCGACCAGGCACCAGGCCAGCAACAGCCCAAGCGGAATCGCCAGCAGTACGGTGAAGCCGCTGAGCATGAGTGTCTGCCCCAGGCTCAACCAGAC < 3:158223/149‑1ACGGGGAACACATACAGCGGTAAACGCCAGCCGAAGGCCTGCACGTTCACCACTGCGACCAGGCACCAGGCCAGCAACAGCCCAAGCGGAATCGCCAGCAGTACGGTGAAGCCGCTGAGCATGAGTGTCTGCCCCAGGCTCAACCAGAC > 4:33247/1‑149 GGGGAACACATACAGCGGTAAACGCCAGCCGAAGGCCTGCACGTTCACCACTGCGACCAGGCACCAGGCCAGCAACAGCCCAAGCGGAATCGCCAGCAGTACGGTGAAGCCGCTGAGCATGAGTGTCTGCCCCAGGCTCAACCAGACCA < 8:116234/149‑1 GGGAACACATACAGCGGTAAACGCCAGCCGAAGGCCTGCACGTTCACCACTGCGACCAGGCACCAGGCCAGCAACAGCCCAAGCGGAATCGCCAGCAGTACGGTGAAGCCGCTGAGCATGAGTGTCTGCCCCAGGCTCAACCAGACCAG > 4:183257/1‑149 GGAACACATACAGCGGTAAACGCCAGCCGAAGGCCTGCACGTTCACCACTGCGACCAGGCACCAGGCCAGCAACAGCCCAAGCGGAATCGCCAGCAGTACGGTGAAGCCGCTGAGCATGAGTGTCTGCCCCAGGCTCAACCAGACCAGT > 2:265045/1‑149 CACGTTCACCACTGCGACCAGGCACCAGGCCAGCAACAGCCCAAGCGGAATCGCCAGCAGTACGGTGAAGCCGCTGAGCATGAGTGTCTGCCCCAGGCTCAACCAGACCAGTTGGCACCGCTGTGGGCACTGGGGGTGCGGCGCATG < 4:61507/147‑1 CCACTGCGACCAGGCACCAGGCCAGCAACAGCCCAAGCGTAATCGCCAGCAGTACGGTGAAGCCGCTGAGCATGAGTGTCTGCCCCAGGCTCAACCAGACCAGTTGGCACCGCTGTGGGCACTGGGGGTGCGGCGCATGCAACTGGTCT < 1:110152/149‑1 ACTGCGACCAGGCACCAGGCCAGCAACAGCCCAAGCGGAATCGCCAGCAGTACGGTGAAGCCGCTGAGCATGAGTGTCTGCCCCAGGCTCAACCAGACCAGTTGGCACCGCTGTGGGCACTGGGGGTGCGGCGCATGCAACTGGTCTGG < 3:183257/149‑1 CCAGTTGGCACCGCTGTGGGCACTGGGGGTGCGGCGCATGCAACTGGTCTGGTTGAGCCTGGGGCAGACACTCATGCTCAGCGGCTTCACCGTACTCCTGGCGATTCCGCTTGGGCTGTTGCTGGCCTGGTGCCTGGTCGCAGTGGTG > 2:334443/1‑148 AGTTGGCACCGCTGTGGGCACTGGGGGTGCGGCGCATGCAACTGGTCTGGTTGAGCCTGGGGCAGACACTCATGCTCAGCGGCTTCACCGTACTGCTGGCGATTCCGCTTGGGCTGTTGCTGGCCTGGTGCCTGGTCGCAGTGGTGAAC < 1:138476/149‑1 GGCGCCGCTGTGGGCACTGGGGGTGCGGCGCATGCAACTGGTCTGGTTGAGCCTGGGGCAGACACTCATGCTCAGCGGCTTCACCGTACTGCTGGCGATTCCGCTTGGGCTGTTGCTGGCCTGGTGCCTGGTCGCAGTGGTGAACGTG < 8:67343/148‑1 GGCACCGCTGTGGGCACTGGGGGTGCGGCGCATGCAACTGGTCTGGTTGAGCCTGGGGCAGACACTCATGCTCAGCGGCTTCACCGTACTGCTGGCGATTCCGCTTGGGCTGTTGCTGGCCTGGTGCCTGGTCGCAGTGGTGATCGTG < 8:225652/148‑1 GGCACCGCTGTGGGCACTGGGGGTGCGGCGCATGCAACTGGTCTGGTTGAGCCTGGGGCAGACACTCATGCTCAGCGGCTTCACCGTACTGCTGGCGATTCCGCTTGGGCTGTTGCTGGCCTGGTGCCTGGTCGCAGTGGTGAACGTc > 1:123075/1‑147 ACGGGGAACACATACAGCGGTAAACGCCAGCCGAAGGCCTGCACGTTCACCACTGCGACCAGGCACCAGGCCAGCAACAGCCCAAGCGGAATCGCCAGCAGTACGGTGAAGCCGCTGAGCATGAGTGTCTGCCCCAGGCTCAACCAGACCAGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4260426‑4260580‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagttgGCACCGCTGTGGGCACTGGGGGTGCGGCGCATGCAACTGGTCTGGTTGAGCCTGGGGCAGACACTCATGCTCAGCGGCTTCACCGTACTGCTGGCGATTCCGCTTGGGCTGTTGCTGGCCTGGTGCCTGGTCGCAGTGGTGAACGTG < NC_002947/4260613‑4260467 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |