New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 465508458 (0.980)4 (0.070) 3/250 NT 7.4% intergenic (+236/‑22) aceA/PP_4118 isocitrate lyase/membrane protein
?NC_002947 = 4655110 45 (0.800)coding (5/696 nt) PP_4118 membrane protein

CGTATTCGCGGGTAAACCCGCACCTACACTGATC‑GGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGGGCCGGCACAGGCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4654971‑4655084
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacaAGCATAGCCCTGATCCGGGGTTTTGCTGTGGCCTGTGCCGGCCCTTTCGCGGGTGAACCCGTTCCTGCAGCGGCCTGCGCCCAATCGCCGATGTGTGTCTCCTCCCGATCAGTGTAGGTGCGGGTTTACCCGCGAATACGGTAGCGGC  <  NC_002947/4655110‑4654963
                                                                                                                                                                                                                                                                       
CGTATTCGCGGGTAAACCCGCACCTACACTGATC‑GGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGGGCCGGCACAGGCCACAAGCATAGCCCTGATCCGGGGTTTTGCTGTGGCCTG                                                                                                                   <  3:79798/149‑1
 GTATTCGCTGGTAAACCCGCACCTACACTGATC‑GGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGGGCCGGCACAGGCCACAAGCATAGCCCTGATCCGGGGTTTTGCTGTGGCCTGT                                                                                                                  <  5:368979/149‑1
         GGGTAAACCCGCACCTACACTGATCGGGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGGGCCGGCACAGGCCACAAGCATAGCCCTGATCCGGGGTTTTGCTGTGGCCTG                                                                                                                   >  1:210173/1‑141
         GGGTAAACCCGCACCTACACTGATC‑GGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGGGCCGGCACAGGCCACAAGCATAGCCCTGATCCGGGGTTTTGCTGTGGCCTG                                                                                                                   <  2:210173/140‑1
                                                                                                               CACAAGCATAGCCCTGATCCGGGGTTTTGCTGTGGCCTGTGCCGGCCCTTTCGCGGGTGAACCCGTTCCTGCAGCGGCCTGCGCCCAATCGCCGATGTGTGTCTCCTCCCGATCAGTGTAGGTGCGGGTTTACCCGCGAATACGGTAGC     >  1:200319/1‑149
                                                                                                               CACAAGCATAGCCCTGATCCGGGGTTTTGCTGTGGCCTGTGCCGGCCCTTTCGCGGGTGAACCCGTTCCTGCAGCGGCCTGCGCCCAATCGCCGATGTGTGTCTCCTC                                              >  7:210844/1‑108
                                                                                                               CACAAGCATAGCCCTGATCCGGGGTTTTGCTGTGGCCTGTGCCGGCCCTTTCGCGGGTGAACCCGTTCCTGCAGCGGCCTGCGCCCAATCGCCGATGTGTGTCTCCTC                                              <  8:210844/108‑1
                                                                                                                ACAAGCATAGCCCTGATCCGGGGTTTTGCTGTGGCCTGTGCCGGCCCTTTCGCGGGTGAACCCGTTCCTGCAGCGGCCTGCGCCCAATCGCCGATGTGTGTCTCCTCCCGATCAGTGTAGGTGCGGGTTTACCCGCGAATACGGTAGCG    >  6:115665/1‑149
                                                                                                                ACAAGCATAGCCCTGATCCGGGGTTTTGCTGTGGCCTGTGCCGGCCCTTTCGCGGGTGAACCCGTTCCTGCAGCGGCCTGCGCCCAATCGCCGATGTGTGTCTCCTCCCGATCAGTGTAGGTGCGGGTTTACCCGCGAATACGGTAGCG    >  6:36474/1‑149
                                                                                                                ACAAGCATAGCCCTGATCCGGGG‑TTTGCTGTGGCCTGTGCCGGCCCTTTCGCGGGTGAACCCGTTCCTGCAGCGGCCTGCGCCCAATCGCCGATGTGTGTCTCCTCCCGATCAGTGTAGGTGCGG                           >  7:346510/1‑125
                                                                                                                ACAAGCATAGCCCTGATCCGGGG‑TTTGCTGTGGCCTGTGCCGGCCCTTTCGCGGGTGAACCCGTTCCTGCAGCGGCCTGCGCCCAATCGCCGATGTGTGTCTCCTCCCGATCAGTGTAGGTGCGG                           <  8:346510/125‑1
                                                                                                                  AAGCATAGCCCTGATCCGGGGTTTTGCTGTGGCCTGTGCCGGCCCTTTCGCGGGTGAACCCGTTCCTGCAGCGGCCTGCGCCCAATCGCCGATGTGTGTCTCCTCCCGATCAGTGTAGGTGCGGGTTTACCCGCGAATACGGTAGCGGC  >  3:339200/1‑149
                                                                                                                  AAGCATAGCCCTGATCCGGGGTTTTGCTGTGGCCTGTGCCGGCCCTTTCGCGGGTGAACCCGTTCCTGCAGCGGCCTGCGCCCAATCGCCGATGTGTGTCTCCTCCCGATCAGTGTAGGTGCGGGTTTACCCGCGAATACGGTAGCGGC  <  4:339200/149‑1
                                                                                                                                                                                                                                                                       
CGTATTCGCGGGTAAACCCGCACCTACACTGATC‑GGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGGGCCGGCACAGGCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4654971‑4655084
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccacaAGCATAGCCCTGATCCGGGGTTTTGCTGTGGCCTGTGCCGGCCCTTTCGCGGGTGAACCCGTTCCTGCAGCGGCCTGCGCCCAATCGCCGATGTGTGTCTCCTCCCGATCAGTGTAGGTGCGGGTTTACCCGCGAATACGGTAGCGGC  <  NC_002947/4655110‑4654963

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.