New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4655084	58 (0.980)	4 (0.070)	3/250	NT	7.4%	intergenic (+236/‑22)	aceA/PP_4118	isocitrate lyase/membrane protein
	?	NC_002947	= 4655110	45 (0.800)					coding (5/696 nt)	PP_4118	membrane protein

GCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTCCAAGCCACCTGATGATTCTCGCCCTGACCGCCGCTGCCCTCTATATATATGCACTGGCCAGCGACAACACCATGCTCGCCCTGATGGCCAAACCCATCCCGGTGCTG  >  NC_002947/4654963‑4655255                                                                                                                                                      |                                                                                                                                                    gccgcTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTt                                                                                                                                                    <  4:339200‑M2/149‑2 (MQ=255) gccgcTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTt                                                                                                                                                    >  3:339200‑M2/1‑148 (MQ=255) gccgcTACCGTATTCGCGGGTAAACCCGAACCTACACTGATCGGGAGGAGACACACATCGGAGATTGGGCGCAGGCCGCTGCAGGATCGGGTTCACCCGCGAAAGG‑GCAGGCACAGGCC‑ACAGCAACACCCCGGATCAGGGCTATGCtt                                                                                                                                                    >  8:306502/1‑149 (MQ=37)   cgcTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTtgt                                                                                                                                                  >  6:115665‑M2/1‑146 (MQ=255)   cgcTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTtgt                                                                                                                                                  >  6:36474‑M2/1‑146 (MQ=255)    gcTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTtgtg                                                                                                                                                 >  1:200319‑M2/1‑145 (MQ=255)        ccGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATGGGCGTTTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGTAAGG‑GCCGGCACAGGCCTACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCa                                                                                                                                              <  1:245865/149‑1 (MQ=38)               cgcgGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCcagc                                                                                                                                       <  7:97093/148‑1 (MQ=255)                gcgGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCcagca                                                                                                                                      <  7:343501/148‑1 (MQ=255)                  gggTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGccc                                                                                                                                          >  6:167106/1‑142 (MQ=255)                  gggTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGccc                                                                                                                                          <  5:167106/142‑1 (MQ=255)                   ggTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCagca‑g‑c                                                                                                                                  >  3:245572/1‑147 (MQ=255)                    gTAAACCCGAACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAg                                                                                                                               <  6:316737/149‑1 (MQ=255)                       aaCCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGAc                                                                                                                            <  7:109672/149‑1 (MQ=255)                        aCCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGAcc                                                                                                                           >  4:25696/1‑149 (MQ=255)                          ccGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAA‑CCCCGGATCAGGGCTATGCTtgt                                                                                                                                                  >  7:346510‑M2/1‑122 (MQ=255)                          ccGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAA‑CCCCGGATCAGGGCTATGCTtgt                                                                                                                                                  <  8:346510‑M2/125‑4 (MQ=255)                              aCCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCAt                                                                                                                     <  8:124838/149‑1 (MQ=255)                                cTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGc                                                                                                                   <  3:25696/149‑1 (MQ=255)                                cTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGc                                                                                                                   >  3:253791/1‑149 (MQ=255)                                  acacTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAG‑CCAGCA‑G‑CAAGGACCGCCCAt                                                                                                                     <  4:159174/144‑1 (MQ=255)                                  acacTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAG‑CCAGCA‑G‑CAAGGACCGCCCAt                                                                                                                     >  3:159174/1‑144 (MQ=255)                                   cacTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTc                                                                                                                <  4:245572/149‑1 (MQ=255)                                        aTCGGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTcc                                                                                                            >  1:318560/1‑148 (MQ=255)                                         tCGGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGTAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTcc                                                                                                            >  4:84929/1‑147 (MQ=255)                                           gggAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTCCaa                                                                                                          <  8:342483/147‑1 (MQ=255)                                             gaggagACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTtgtg                                                                                                                                                 <  8:210844‑M2/108‑5 (MQ=255)                                             gaggagACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTtgtg                                                                                                                                                 >  7:210844‑M2/1‑104 (MQ=255)                                                  gaCACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGGACCCGCCACAGGCC‑ACAGCAAAACCCCGGATCAGGCCTATGCTGTTGGCAGCCCCCCC‑C‑CAAGGACCCCCCATGCCACGTCCAAGCCCCCt                                                                                                   >  1:286415/1‑148 (MQ=37)                                                    cacacaTCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGGTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTCCAAGCCACCtgatg                                                                                               <  7:49192/149‑1 (MQ=255)                                                        caTCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTCCAAGCCACCTGATGAtt                                                                                            >  3:214324/1‑148 (MQ=255)                                                          tCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTCCAAGCCACCTGATGATtctc                                                                                         <  4:214324/149‑1 (MQ=255)                                                            ggCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTCCAAGCCACCtgat                                                                                                <  1:243659/140‑1 (MQ=255)                                                            ggCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTCCAAGCCACCtgat                                                                                                >  2:243659/1‑140 (MQ=255)                                                                   gggCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTCCAAGCCACCTGATGATTCTCGCCCTGAc                                                                                 <  2:318560/148‑1 (MQ=255)                                                                     gcgcAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGcc                                                                                                                                           >  1:61074/1‑90 (MQ=255)                                                                     gcgcAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGcc                                                                                                                                           <  2:61074/90‑1 (MQ=255)                                                                           gCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTCCAAGCCACCTGATGATTCTCGCCCt                                                                                    <  1:306700/137‑1 (MQ=255)                                                                           gCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTCCAAGCCACCTGATGATTCTCGCCCt                                                                                    >  2:306700/1‑137 (MQ=255)                                                                           gCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTCCAAGCCACCTGATGATTCTCGCCCTGACCGCCGCTGc                                                                        <  5:225667/149‑1 (MQ=255)                                                                           gCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTCCAAGCCACCTGATGATTCTCGCCCTGACCGCCGCTGc                                                                        >  6:293017/1‑149 (MQ=255)                                                                                 gCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTCCAAGCCACCTGATGATTCTCGCCCTGAccgccg                                                                            <  6:344675/139‑1 (MQ=255)                                                                                 gCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTCCAAGCCACCTGATGATTCTCGCCCTGAccgccg                                                                            >  5:344675/1‑139 (MQ=255)                                                                                   aGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTCCAAGCCACCTGATGATTCTCGCCCTGACCGCCGCTGCCCTCtata                                                                <  5:293017/149‑1 (MQ=255)                                                                                      aaCGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGTATCAGGGCTATGCTTGTGGCAGCCCAGCA‑T‑CAAGGACCGCCCATGCCTCGTCCAAGCCACCTGATGATTCTCGCCCTGACCGCCGCTGCCCTCtatatat                                                             <  7:306502/149‑1 (MQ=255)                                                                                           gTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTCCAAGCCACCTGATGATTCTCGCCCTGACCGCCGCTGCCCTCTATATATATGCa                                                        >  5:273669/1‑149 (MQ=255)                                                                                            ttCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAACCCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTCCAAGCCACCTGATGATTCTCGCCCTGACCGCCGCTGCCCTCTATATATATGCAc                                                       <  4:253791/149‑1 (MQ=255)                                                                                            ttCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAgca‑g‑ca                                                                                                                                 <  1:90491/75‑1 (MQ=255)                                                                                            ttCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAgca‑g‑ca                                                                                                                                 >  2:90491/1‑75 (MQ=255)                                                                                            ttCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGcc                                                                                                                  >  4:45944/1‑90 (MQ=255)                                                                                            ttCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGcc                                                                                                                  <  3:45944/90‑1 (MQ=255)                                                                                                 ccGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCATGTGAAGGACCGCCCATGCCTCGTCCAAGCCACCTGATGATTCTCGCCCTGACCGCCGCTGCCCTCTATATATATGCACTgg                                                    >  1:299931/1‑149 (MQ=255)                                                                                                 ccGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTCCAAGCCACCTGATGATTCTCGCCCTGACCGCCGCTGCCCTCTATATATATGCACTGGc                                                   >  8:216713/1‑148 (MQ=255)                                                                                                      ataGG‑GCCGGCAAAGGCC‑AGAGCAAATGCCGGGATCAGGGCTTTGCTTGTGGAAGCCCAGCT‑G‑CAAGGACAGCGCATGCATCGTGCAAGCCACCTGATGATTCTGGCCGTGTCCGCCGCTGCCCTCta                                                                  <  1:278554/126‑1 (MQ=255)                                                                                                          g‑gCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTCCAAGCCACCTGATGATTCTCGCCCTGACCGCCGCTGCCCTCTATATATATGCACTGGCCAGCGccaa                                          >  2:30882/1‑148 (MQ=255)                                                                                                                gCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTCCAAGCCACCTGATGATTCTCGCCCTGACCGCCGCTGCCCTCTATATATATGCACTGGCCAGCGACAACACCAt                                    >  1:205905/1‑149 (MQ=255)                                                                                                                  acaGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTtgtggcctgtgccggccctttcgcgggtgaacccgttcctgcagcggcctgcgcccaatcgccgatgtgtgtctcctcccgatcagtgtaggtgcgggtttaccagcgaatac                                    <  5:368979‑M2/149‑114 (MQ=255)                                                                                                                   caGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTtgtggcctgtgccggccctttcgcgggtgaacccgttcctgcagcggcctgcgcccaatcgccgatgtgtgtctcctcccgatcagtgtaggtgcgggtttacccgcgaatacg                                   <  3:79798‑M2/149‑115 (MQ=255)                                                                                                                   caGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTtgtggcctgtgccggccctttcgcgggtgaacccgttcctgcagcggcctgcgcccaatcgccgatgtgtgtctcctcccgatcagtgtaggtgcgggtttaccc                                            <  2:210173‑M2/140‑106 (MQ=255)                                                                                                                   caGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTtgtggcctgtgccggccctttcgcgggtgaacccgttcctgcagcggcctgcgcccaatcgccgatgtgtgtctcctccccgatcagtgtaggtgcgggtttaccc                                           >  1:210173‑M2/1‑35 (MQ=255)                                                                                                                                    cccGGATCAGGGCTATGCTTGTGGTAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTCCAAGCCACCTGATGATTCTCGCCCTGACCGCCGCTGCCCTCTATATATATGCACTGGCCAGCGACAACACCATGCTCGCCCTGATGGCCaaa                 <  3:84929/149‑1 (MQ=255)                                                                                                                                     ccGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTCCAAGCCACCTGATGATTCTCGCCCTGACCGCCGCTGCCCTCTATATATATGCACTGGCCAGCGACAACACCATGCTCGCCCTGATGGCCAAAc                >  7:275835/1‑149 (MQ=255)                                                                                                                                         aTCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATCCCTCGTCCAAGCCACCTGATGATTCTCGCCCTGACCGCCGCTGCCCTCTATATATATGCACTGGCCAGCGACAACACCATGCTCGCCCTGATGGCCAAACCCAt            <  2:286415/149‑1 (MQ=255)                                                                                                                                             gggCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTCCAAGCCACCTGATGATTCTCGCCCTGACCGCCGCTGCCCTCTATATATATGCACTGGCCAGCGACAACACCATGCTCGCCCTGATGGCCAAACCCATCCCg        >  5:132536/1‑149 (MQ=255)                                                                                                                                                   tGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTCCAAGCCACCTGATGATTCTCGCCCTGACCGCCGCTGCCCTCTATATATATGCACTGGCCAGCGACAACACCATGCTCGCCCTGATGGCCAAACCCATCCCGGTGCTg  >  7:42794/1‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                    GCCGCTACCGTATTCGCGGGTAAACCCGCACCTACACTGATCGGGAGGAGACACACATCGGCGATTGGGCGCAGGCCGCTGCAGGAACGGGTTCACCCGCGAAAGG‑GCCGGCACAGGCC‑ACAGCAAAACCCCGGATCAGGGCTATGCTTGTGGCAGCCCAGCA‑G‑CAAGGACCGCCCATGCCTCGTCCAAGCCACCTGATGATTCTCGCCCTGACCGCCGCTGCCCTCTATATATATGCACTGGCCAGCGACAACACCATGCTCGCCCTGATGGCCAAACCCATCCCGGTGCTG  >  NC_002947/4654963‑4655255

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.