New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4819815 = | 47 (0.800) | 4 (0.070) | 4/254 | NT | 9.5% | coding (11375/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
? | NC_002947 | 4819867 = | 31 (0.540) | coding (11323/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
CCATGCGCTGGTGGCTGCCGGCGTCTGCGTGGACCAGCCAGTGGCACTGCTTGCCGAGCGTGGGTTGCCGCTGCTGGGCATGATCGTCGGCAGCTTCAAGGCCGGCGCCGGCTACCTGCCGCTGGACCCGGGCCTGCCGGCGGCGCGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4819964‑4819815 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGTTCAGCCCGGCGTAATCATAGGATGCCTC > NC_002947/4819867‑4820014 CCATGCGCTGGTGGCTGCCGGCGTCTGCGTGGACCAGCCAGTGGCACTGCTTGCCGAGCGTGGGTTGCCGCTGCTGGGCATGATCGTCGGCAGCTTCAAGGCCGGCGCCGGCTACCTGCCGCTGGACCCGGGCCTGCCGGCGGCGCGCC < 5:122298/149‑1 GTGGACCAGCCAGTGGCACTGCTTGCCGAGCGTGGGTTGCCGCTGCTGGGCATGATCGTCGGCAGCTTCAAGGCCGGCGCCGGCTACCTGCCGCTGGACCCGGGCCTGCCGGCGGCGCGC > 5:94593/1‑120 GTGGACCAGCCAGTGGCACTGCTTGCCGAGCGTGGGTTGCCGCTGCTGGGCATGATCGTCGGCAGCTTCAAGGCCGGCGCCGGCTACCTGCCGCTGGACCCGGGCCTGCCGGCGGCGCGC < 6:94593/120‑1 GGCCGGCGCCGGCTACCTGCCGCTGGACCCGGGCCTGCCGGCGGCGCGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGG > 3:90835/1‑149 GCCGGCGCCGGCTACCTGCCGCGGGACCCGGGCCTGCCGGCGGCGCGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCCCTGGCTGGTCCACGCCGACGCCGGCAGCCCCCCGCGCATGGC > 7:234102/1‑149 CCGGCGCCGGCTACCTGCCGCTGGACCCGGGCCTGCCGGCGGCGCGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCC > 3:83053/1‑149 CGGCGCGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGTTCAGCCCGGCGTAATCATA < 4:90835/149‑1 GCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGTTCAGCCCGGCGTAATCATAGGATGC < 1:287028/149‑1 CTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCGCGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGTTCAGCCCGGCGTAATCATAGGATGCCT > 1:203030/1‑149 CTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGTTCAGCCCGGCGTAATCATAGGATGCCT > 2:155714/1‑149 TTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGTCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGTTCAGCCCGGCGTAATCATAGGATGCCTC > 1:270163/1‑149 TTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGTTCAGCCCGGCGTAATCATAGGATGCCTC > 1:68405/1‑149 TTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGTTCAGCCCGGCGTAATCATAGGATGCCTC > 7:242023/1‑149 CCATGCGCTGGTGGCTGCCGGCGTCTGCGTGGACCAGCCAGTGGCACTGCTTGCCGAGCGTGGGTTGCCGCTGCTGGGCATGATCGTCGGCAGCTTCAAGGCCGGCGCCGGCTACCTGCCGCTGGACCCGGGCCTGCCGGCGGCGCGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4819964‑4819815 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGTTCAGCCCGGCGTAATCATAGGATGCCTC > NC_002947/4819867‑4820014 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |