New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4819815 =	47 (0.800)	4 (0.070)	4/254	NT	9.5%	coding (11375/12954 nt)	pvdL	non‑ribosomal peptide synthetase
	?	NC_002947	4819867 =	31 (0.540)					coding (11323/12954 nt)	pvdL	non‑ribosomal peptide synthetase

GAAGCCTCCAGCTCACCGAGCAACTGCCGCCCCTGCT‑CGGCGCAGGCCGCGCTGCACACCAGCACTGGCGTGCGGCTGAGCTGGATGATGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGTTCAGCCCGGCGTAATCATAGGATGCCTC  >  NC_002947/4819719‑4820014                                                                                                                                                      |                                                                                                                                                    gAAGCCTCCAGCTCACCGAGCAACTGCCGCCCCTGCT‑CGGCGCAGGCCGCGCTGCACACCAGCACTGGCGTGCGGCTGAGCTGGATGATGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCtt                                                                                                                                                     <  4:268706/149‑1 (MQ=255)  aaGCCTCCAGCTCACCGAGCAACTGCCGCCCCTGCT‑CGGCGCAGGCCGCGCTGCACACCAGCACTGGCGTGCGGCTGAGCTGGATGATGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGTCAGGTAGCCGGCGCCGGCCtt                                                                                                                                                     >  2:288442/1‑148 (MQ=255)   aGCCTCCAGCTCACCGAGCAACTGCCGCCCCTGCT‑CGGCGCAGGCCGCGCTGCACACCAGCACTGGCGTGCGGCTGAGCTGGATGATGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGa                                                                                                                                                   <  3:304782/149‑1 (MQ=255)    gCCTCCAGCTCACCGAGCAACTGCCGCCCCTGCT‑CGGCGCAGGCCGCGCTGCACACCAGCACTGGCGTGCGGCTGAGCTGGATGATGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGaa                                                                                                                                                  <  3:86528/149‑1 (MQ=255)    gCCTCCAGCTCACCGAGCAACTGCCGCCCCTGCT‑CGGCGCAGGCCGCGCTGCACACCAGCACTGGCGTGCGGCTGAGCTGGATGATGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGaa                                                                                                                                                  <  7:219893/149‑1 (MQ=255)       tCCAGCTCACCGAGCAACTGCCGCCCCTGCT‑CGGCGCAGGCCGCGCTGCACACCAGCACTGGCGTGCGGCTGAGCTGGATGATGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCt                                                                                                                                               >  5:258803/1‑149 (MQ=255)           gCTCACCGAGCAACTGCCGCCCCTGCTCCGGCGCAGGCCGCGCTGCACACCAGCACTGGCGTGCGGCTGAGCTGGATGATGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGcc                                                                                                                                            >  1:209827/1‑149 (MQ=255)                 cGAGCAACTGCCGCCCCTGCT‑CGGCGCAGGCCGCGCTGCACACCAGCACTGGCGTGCGGCTGAGCTGGATGATGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCcg                                                                                                                                           <  4:62419/143‑1 (MQ=255)                 cGAGCAACTGCCGCCCCTGCT‑CGGCGCAGGCCGCGCTGCACACCAGCACTGGCGTGCGGCTGAGCTGGATGATGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCcg                                                                                                                                           >  3:62419/1‑143 (MQ=255)                      aaCTGCCGCCCCTGCT‑CGGCGCAGGCCGCGCTGCACACCAGCACTGGCGTGCGGCTGAGCTGGATGATGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGc                                                                                                                                             >  5:106719/1‑136 (MQ=255)                      aaCTGCCGCCCCTGCT‑CGGCGCAGGCCGCGCTGCACACCAGCACTGGCGTGCGGCTGAGCTGGATGATGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGc                                                                                                                                             <  6:106719/136‑1 (MQ=255)                           ccgccCCTGCT‑CGGCGCAGGCCGCGCTGCACACCACCACTGGCGTCCGGCTGAGCTGGATGATGCATTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGCCAGGTAACCCGCGCCCGCCTAGAACCTGCCGACGATCATGCCcagca                                                                                                                           >  5:175777/1‑149 (MQ=255)                               cccTGCT‑CGGCGCAGGCCGCGCTGCACACCAGCACTGGCGTGCGGCTGAGCTGGATGATGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCgg                                                                                                                       >  2:292366/1‑149 (MQ=255)                                gttGCT‑CGGCGCAGGCCGCGCTGCACACCAGCACTGGCGTGCGGCTGAGCTGGATGATGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGc                                                                                                                      <  2:218721/147‑1 (MQ=255)                                ccTGCT‑CGGCGCAGGCCGCGCTGCACACCAGCACTGGCGTGCGGCTGAGCTGGATGATGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCgg                                                                                                                       >  1:89927/1‑148 (MQ=255)                                 cTGCT‑CGGCGCAGGCCGCGCTGCACACCAGCACTGGCGTGCGGCTGAGCTGGATGATGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCCGCAGCGGc                                                                                                                      >  3:20036/1‑148 (MQ=255)                                           gcAGGCCGCGCTGCACACCAGCACTGGCGTGCGGCTGAGCTGGATGATGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGc                                                                                                                                 <  6:302359/128‑1 (MQ=255)                                           gcAGGCCGCGCTGCACACCAGCACTGGCGTGCGGCTGAGCTGGATGATGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGc                                                                                                                                 >  5:302359/1‑128 (MQ=255)                                           gcAGGCCGCGCTGCACACCAGCACTGGCGTGCGGCTGAGCTGGATGATGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCt                                                                                                            >  5:195177/1‑149 (MQ=255)                                               gCCGCGCTGCACACCAGCACTGGCGTGCGGCTGAGCTGGATGATGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCgg                                                                                                         >  1:283878/1‑148 (MQ=255)                                                   cgcTGCACACCAGCACTGGCGTGCGGCTGAGCTGGATGATGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGTCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGc                                                                                                    <  1:288442/149‑1 (MQ=255)                                                    gcTGCACACCAGCACTGGCGTGCGGCTGAGCTGGATGATGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAg                                                                                                     >  7:285500/1‑147 (MQ=255)                                                    gcTGCACACCAGCACTGGCGTGCGGCTGAGCTGGATGATGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCa                                                                                                   <  2:129144/149‑1 (MQ=255)                                                                 aCTGGCGTGCGGCTGAGCTGGATGATGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCActggctg                                                                                      <  1:292366/149‑1 (MQ=255)                                                                                 gcgggATGATGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCg                                                                      <  6:258803/146‑1 (MQ=255)                                                                                     gatgatGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCa                                                                   <  4:20036/148‑1 (MQ=255)                                                                                          tgCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGccac                                                              >  5:176844/1‑148 (MQ=255)                                                                                            cTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAg                                                           <  2:283878/149‑1 (MQ=255)                                                                                               tGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAgc                                                          <  6:195177/147‑1 (MQ=255)                                                                                                   ggccggcgccggctacctgccgctggacccgggcctgccggcggcgcgcctTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATgg                                                    >  3:90835‑M2/52‑149 (MQ=255)                                                                                                   GGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATgg                                                    <  5:122298‑M1/149‑1 (MQ=255)                                                                                                    gccggcgccggctacctgccgcgggacccgggcctgccggcggcgcgcctTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCCCTGGCTGGTCCACGCCGACGCCGGCAGCCCCCCGCGCATGGc                                                   >  7:234102‑M2/51‑149 (MQ=255)                                                                                                    GCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCAc                                                                                >  5:94593‑M1/1‑120 (MQ=255)                                                                                                    GCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCAc                                                                                <  6:94593‑M1/120‑1 (MQ=255)                                                                                                     ccggcgccggctacctgccgctggacccgggcctgccggcggcgcgcctTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGcc                                                  >  3:83053‑M2/50‑149 (MQ=255)                                                                                                          cgccgGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGc                                             >  1:363598/1‑149 (MQ=255)                                                                                                               gCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTg                                        >  2:188610/1‑149 (MQ=255)                                                                                                                       gggTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAg                                <  6:150385/149‑1 (MQ=255)                                                                                                                            cAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGtt                             >  2:287028/1‑147 (MQ=255)                                                                                                                              gCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGTTCAGc                         >  7:45515/1‑149 (MQ=255)                                                                                                                              gCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGTTCAGc                         >  1:149423/1‑149 (MQ=255)                                                                                                                                   aGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGTTCAGCCCGGc                    <  8:285500/149‑1 (MQ=255)                                                                                                                                            cggcgcgcctTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGTTCAGCCCGGCGTAATCATa           <  4:90835‑M2/139‑1 (MQ=255)                                                                                                                                             cgccggcCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGTTCAGCCCGGCGTAATCATAg          <  5:285202/149‑1 (MQ=255)                                                                                                                                             cgccggcCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGTTCAGCCCGGCGTAATCATAg          <  6:122298/149‑1 (MQ=255)                                                                                                                                              gccggcCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGTTCAGCCCGGCGTAATCATAgg         <  8:45515/149‑1 (MQ=255)                                                                                                                                              gccggcCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGTTCAGCCCGGCGTAATCATAg          >  1:15803/1‑148 (MQ=255)                                                                                                                                                cggcCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGTTCAGCCCGGCGTAATCATAGGAt       <  2:209827/149‑1 (MQ=255)                                                                                                                                                  gcctTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGTTCAGCCCGGCGTAATCATAGGATGc     <  1:287028‑M2/145‑1 (MQ=255)                                                                                                                                                    ctTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCGCGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGTTCAGCCCGGCGTAATCATAGGATGCCt   >  1:203030‑M2/3‑149 (MQ=255)                                                                                                                                                    ctTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGTTCAGCCCGGCGTAATCATAGGATGCCt   >  2:155714‑M2/3‑149 (MQ=255)                                                                                                                                                     tTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGTCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGTTCAGCCCGGCGTAATCATAGGATGCCTc  >  1:270163‑M2/2‑149 (MQ=255)                                                                                                                                                     tTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGTTCAGCCCGGCGTAATCATAGGATGCCTc  >  1:68405‑M2/2‑149 (MQ=255)                                                                                                                                                     tTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGTTCAGCCCGGCGTAATCATAGGATGCCTc  >  7:242023‑M2/2‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                    GAAGCCTCCAGCTCACCGAGCAACTGCCGCCCCTGCT‑CGGCGCAGGCCGCGCTGCACACCAGCACTGGCGTGCGGCTGAGCTGGATGATGCTTTGCAGGCGCGCCGCCGGCAGGCCCGGGTCCAGCGGCAGGTAGCCGGCGCCGGCCTTGAAGCTGCCGACGATCATGCCCAGCAGCGGCAACCCACGCTCGGCAAGCAGTGCCACTGGCTGGTCCACGCAGACGCCGGCAGCCACCAGCGCATGGCCCAGGCGGTTGGCCGCCAGGTTCAGCCCGGCGTAATCATAGGATGCCTC  >  NC_002947/4819719‑4820014

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.