New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4823818 | 40 (0.680) | 3 (0.050) | 3/252 | NT | 7.3% | coding (7372/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
? | NC_002947 | = 4823850 | 38 (0.670) | coding (7340/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
ATGTAGGCCGTACGGCTACCGATGACGCGGCCGATCGGTACGCTGCCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCACGGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4823667‑4823818 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgAGGCGCTGACCGGCGAGCACTTGCAGCGCATCCGCCAGGCCTTTGCGCCGCAGCAGTGCTTCAATGCCTACGGCCCGACCGAAACCGTGGTCATGCCGCTGGCGTGCCTGGCCCCAGAGGCCTTGCCAGCAGACCTTGGCAGCGTA < NC_002947/4823850‑4823705 ATGTAGGCCGTACGGCTACCGATGACGCGGCCGATCGGTACGCTGCCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCACGGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTG < 2:284791/149‑1 TAGGCCGTACGGCTACCGATGACGCGGCCGATCGGTACGCTGCCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCACGGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCG < 4:245551/149‑1 AGGCCGTACGGCTACCGATGACGCGGCCGATCGGTACGCTGCCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCACGGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGtg > 7:298050/1‑146 GCTGCCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCACGGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGAGGCGCTGACCGGCGAGCACTTGCAGCGCATCCGCCAG < 7:186854/149‑1 TGCCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCACGGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGAGGCGCTGACCGGCGAGCACTTGCAGCGCATCCGCCAGGC > 5:238048/1‑149 CCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCACGGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGAGGCGCTGACCGGCGAGCACTTGCAGCGCATCCGCCAGGCC < 6:238048/148‑1 GCGAGGCGCTGACCGGCGAGCACTTGCAGCGCATCCGCCAGGCCTTTGCGCCGCAGCAGTGCTTCAATGCCTACGGCCCGACCGAAACCGTGGTCATGCCGCTGGCGTGCCTGGCCCCAGAGGCCTTGCCAGCAGACCTTGGCAGCGTA < 5:65073/149‑1 ATGTAGGCCGTACGGCTACCGATGACGCGGCCGATCGGTACGCTGCCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCACGGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4823667‑4823818 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgAGGCGCTGACCGGCGAGCACTTGCAGCGCATCCGCCAGGCCTTTGCGCCGCAGCAGTGCTTCAATGCCTACGGCCCGACCGAAACCGTGGTCATGCCGCTGGCGTGCCTGGCCCCAGAGGCCTTGCCAGCAGACCTTGGCAGCGTA < NC_002947/4823850‑4823705 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |