New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4823818	40 (0.680)	3 (0.050)	3/252	NT	7.3%	coding (7372/12954 nt)	pvdL	non‑ribosomal peptide synthetase
	?	NC_002947	= 4823850	38 (0.670)					coding (7340/12954 nt)	pvdL	non‑ribosomal peptide synthetase

TAGGCCGTACGGCTACCGATGACGCGGCCGATCGGTACGCTGCCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAATCACCAGGCGTACCGGCAATTGTTCGCCCCGCCCGCCCAGATACTGCGCCAGCTGGCTGCCGTAGCTGGGGGTGAAGCCCAGAATGCTCACCTGCTGCTCGC  >  NC_002947/4823670‑4823964                                                                                                                                                      |                                                                                                                                                   tAGGCCGTACGGCTACCGATGACGCGGCCGATCGGTACGCTGCCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCG                                                                                                                                                    <  4:245551‑M1/149‑1 (MQ=255)   ggCCGTACGGCTACCGATGACGCGGCCGATCGGTACGCTGCCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGa                                                                                                                                                  <  2:223010/149‑1 (MQ=255)   ggCCGTACGGCTACCGATGACGCGGCCGATCGGTACGCTGCCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGa                                                                                                                                                  >  6:226309/1‑149 (MQ=255)     ccGTACGGCTACCGATGACGCGGCCGATCGGTACGCTGCCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATg                                                                                                                                                <  5:76778/149‑1 (MQ=255)       gTACGGCTACCGATGACGCGGCCGATCGGTACGCTGCCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATgcg                                                                                                                                              >  7:153980/1‑149 (MQ=255)        tACGGCTACCGATGACGCGGCCGATCGGTACGCTGCCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATgcgc                                                                                                                                             <  5:272980/149‑1 (MQ=255)        tACGGCTACCGATGACGCGGCCGATCGGTACGCTGCCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATgcgc                                                                                                                                             <  8:153980/149‑1 (MQ=255)          cGGCTACCGATGACGCGGCCGATCGGTACGCTGCCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCAC‑GGTTTCTGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCt                                                                                                                                            <  1:137058/148‑1 (MQ=255)          cGGCTAACGTTGACTCGGCCGTTCGGTACGCTGCCATGGTCGGCTGTCATGGCCTATGTGGCAAGGGAAGCCATGGGCATGACCACTTGTTTCGGTCGGTCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCt                                                                                                                                            <  1:289918/149‑1 (MQ=255)             cTACCGATGACGCGGCCGATCGGTACGCTGCCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGc                                                                                                                                          >  1:68451/1‑147 (MQ=255)             cTACCGATGACGCGGCCGATCGGTACGCTGCCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCaa                                                                                                                                        <  4:82864/149‑1 (MQ=255)             cTACCGATGACGCGGCCGATCGGTACGCTGCCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCAC‑GGTTTCGGTCGGCCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGc                                                                                                                                          >  1:73926/1‑147 (MQ=255)                      aCGCGGCCGATCGGTACGCTGCCAAGGGCGTCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGc                                                                                                                                <  3:34897/148‑1 (MQ=255)                             cGATCGGTACGCTGCCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAgc                                                                                                                        <  5:361340/149‑1 (MQ=255)                                    tACGCTGCCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTcgc                                                                                                                 <  5:65073‑M2/149‑4 (MQ=255)                                       gCTGCCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGaggcgctgaccggcgagcacttgcagcgcatccgccag                                                                                                              <  7:186854‑M1/149‑39 (MQ=255)                                       gCTGCCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCAc                                                                                                              <  5:226309/149‑1 (MQ=255)                                         tGCCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGaggcgctgaccggcgagcacttgcagcgcatccgccaggc                                                                                                            >  5:238048‑M1/1‑109 (MQ=255)                                          gCCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCgg                                                                                                           <  3:237816/149‑1 (MQ=255)                                           ccAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGaggcgctgaccggcgagcacttgcagcgcatccgccaggcc                                                                                                           <  6:238048‑M1/148‑42 (MQ=255)                                             aaGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTaa                                                                                                        >  6:115419/1‑149 (MQ=255)                                               ggTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAATc                                                                                                      <  6:65073/149‑1 (MQ=255)                                                          aaGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAATCACCAGGCGTAc                                                                                           >  3:143859/1‑149 (MQ=255)                                                           aGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAATCACCAGGCGTAcc                                                                                          <  3:214272/149‑1 (MQ=255)                                                                      gCCAGGCACGCCAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCTCCGGTCAGCGCCTCGCCACCGGTAATCACCAGGCGTACCGGCAATTGTTc                                                                               <  1:276035/149‑1 (MQ=255)                                                                          ggCACGGCAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAATCACCAGGCGTACCGGCAATTGTTcgccc                                                                           >  1:352103/1‑149 (MQ=255)                                                                             aCGCCAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAATCACCAGGCGTACCGGCAATTGTTcgccccgc                                                                        >  4:85888/1‑149 (MQ=255)                                                                               gcaaGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGTGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAATCACCAGGCGTACCGGCAATTGTTcgccccgccc                                                                      >  5:245328/4‑149 (MQ=255)                                                                                 cAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAATCACCa                                                                                                  >  6:243011/1‑119 (MQ=255)                                                                                 cAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAATCACCa                                                                                                  <  5:243011/119‑1 (MQ=255)                                                                                   gCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGTGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAATCACCAGGCGTACCGGCAATTGTTCGCCCCgcccgccc                                                                  <  8:298050/149‑1 (MQ=255)                                                                                      gCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAATCACCAGGCGTACCGGCAATTGTTCGCCCcgcccgcc                                                                   >  3:241339/1‑145 (MQ=255)                                                                                                              ccGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGGCAGCGCCGCGCCACCGGTAATCACCAGGCGTACCGGCAATTGTTCGCCCCGCCCGCCCAGATACTGCGCCAGCTGGCTGCCGTa                                        <  4:308854/149‑1 (MQ=255)                                                                                                               cGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAATCACCAGGCGTACCGGCAATTGTTCGCCCCGCCCGCCCAGATACTGCGCCAGCTGGCTGCCGTAg                                       >  1:237998/1‑149 (MQ=255)                                                                                                                gTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAATCACCAGGCGTACCGGCAATTGTTCGCCCCGCCCGCCCAGATACTGCGCCAGCTGGCTGCCGTAGc                                      >  6:241161/1‑149 (MQ=255)                                                                                                                   ggCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAATCACCAGGCGTACCGGCAATTGTTCGCCCCGCCCGCCCAGATACTGCGCCAGCTGGCTGCCGTAGCTgg                                   <  2:352103/149‑1 (MQ=255)                                                                                                                    gCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAATCACCAGGCGTACCGGCAATTGTTCGCCCCGCCCGCCCAGATACTGCGCCAGCTGGCTGCCGTAGCTggg                                  >  5:259788/1‑149 (MQ=255)                                                                                                                      aTTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAATCACCAGGCGTACCGGCAATTGTTCGCCCCGCCCGCCCAGATACTGCGCCAGCTGGCTGCCGTAGCTggggg                                >  7:177399/1‑149 (MQ=255)                                                                                                                       ttGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAATCACCAGGCGTACCGGCAATTGTTCGCCCCGCCCGCCCAGATACTGCGCCAGCTGGCTGCCGTAGCTGGGGGt                               >  6:43679/1‑149 (MQ=255)                                                                                                                         gAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAATCACCAGGCGTACCGGCAATTGTTCGCCCCGCCCGCCCAGATACTGCGCCAGCTGGCTGCCGTAGCTGGGGGTg                              <  4:143859/148‑1 (MQ=255)                                                                                                                            gCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAAt                                                                                                       >  7:106542/1‑72 (MQ=255)                                                                                                                            gCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAAt                                                                                                       <  8:106542/72‑1 (MQ=255)                                                                                                                              aCTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAATCACCAGGCGTACCGGCAATTGTTCGCCCCGCCCGCCCAGATACTGCGCCAGCTGGCTGCCGTAGCTGGGGGTGAAGccc                        <  4:241339/149‑1 (MQ=255)                                                                                                                                      ggcgCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAATCACCAGGCGTACCGGCAATTGTTCGCCCCGCCCGCCCAGATACTGCGCCAGCTGGCTGCCGTAGCTGGGGGTGAAg                           <  5:120337/138‑1 (MQ=255)                                                                                                                                      ggcgCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAATCACCAGGCGTACCGGCAATTGTTCGCCCCGCCCGCCCAGATACTGCGCCAGCTGGCTGCCGTAGCTGGGGGTGAAg                           >  6:120337/1‑138 (MQ=255)                                                                                                                                             aGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAATCACCAGGCGTACCGGCAATTGTTCGCCCCGCCCGCCCAGATACTGCGCCAGCTGGCTGCCGTAGCTGGGGGTGAAGCCCAGAATGCTCACctgc         <  8:177399/149‑1 (MQ=255)                                                                                                                                              ggCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTcgccaggcctttgcgccgcagcagtgcttcaatgcctacggcccgaccgaaaccgtggtcatgccgctggcgtgcctggccccagaggccttgccagcagaccttgg         <  6:238048‑M2/148‑108 (MQ=255)                                                                                                                                               gCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTcgccaggcctttgcgccgcagcagtgcttcaatgcctacggcccgaccgaaaccgtggtcatgccgctggcgtgcctggccccagaggccttgccagcagaccttggca       >  5:238048‑M2/1‑40 (MQ=255)                                                                                                                                                 cTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTcgccaggcctttgcgccgcagcagtgcttcaatgcctacggcccgaccgaaaccgtggtcatgccgctggcgtgcctggccccagaggccttgccagcagaccttggcagc     <  7:186854‑M2/149‑112 (MQ=255)                                                                                                                                                 cTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAATCACCAGGCGTACCGGCAATTGTTCGCCCCGCCCGCCCAGATACTGCGCCAGCTGGCTGCCGTAGCTGGGGGTGAAGCCCAGAATGCTCACctgctg       <  5:157647/147‑1 (MQ=255)                                                                                                                                                 cTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAATCACCAGGCGTACCGGCAATTGTTCGCCCCGCCCGCCCAGATACTGCGCCAGCTGGCTGCCGTAGCTGGGGGTGAAGCCCAGAATGCTCACctgctg       >  6:157647/1‑147 (MQ=255)                                                                                                                                                    gCGaggcgctgaccggcgagcacttgcagcgcatccgccaggcctttgcgccgcagcagtgcttcaatgcctacggcccgaccgaaaccgtggtcatgccgctggcgtgcctggccccagaggccttgccagcagaccttggcagcgta  <  5:65073‑M1/149‑147 (MQ=255)                                                                                                                                                      |                                                                                                                                                   TAGGCCGTACGGCTACCGATGACGCGGCCGATCGGTACGCTGCCAAGGTCTGCTGGCAAGGCCTCTGGGGCCAGGCACGCCAGCGGCATGACCAC‑GGTTTCGGTCGGGCCGTAGGCATTGAAGCACTGCTGCGGCGCAAAGGCCTGGCGGATGCGCTGCAAGTGCTCGCCGGTCAGCGCCTCGCCACCGGTAATCACCAGGCGTACCGGCAATTGTTCGCCCCGCCCGCCCAGATACTGCGCCAGCTGGCTGCCGTAGCTGGGGGTGAAGCCCAGAATGCTCACCTGCTGCTCGC  >  NC_002947/4823670‑4823964

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.