| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5306311 = | 60 (1.020) | 3 (0.060) | 3/242 | NT | 5.9% | coding (941/3483 nt) | recC | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit |
| ? | NC_002947 | 5306387 = | 41 (0.750) | coding (865/3483 nt) | recC | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit | |||||
CTGTGCGTACACAACCCATGCCGCCACCACTGGGCCGATATCGTTGCCGACAAGGACCTGTTGCGCCACCAGTACAAACGCCAGCAACGCAAGCAAGGCATGCCCCTGCAACTGGACGACCAGACGCTGCACCAGCATGCCCACCCGTTGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5306465‑5306311‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgttgctggcGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTACGCACAGCAATACCTGACTGAAACGCGACAGGCCTGCCAGTGCTTCCAGGGCCTGGGCCGGCAGCGAAGAGATA > NC_002947/5306387‑5306532 CTGTGCGTACACAACCCATTCCGCCACCACTGGGCCGATCTCGTTGCCGACAATGACCTGTTGAGCCACCAGTACAAACGACAGCAACGCAAGCAAGGCATGCCCCTGCAACTGGACGACCAGACGCTGCACCAGCATGCCCACCCGT < 3:186854/148‑1CTGTGCGTACACAACCCATGCCGCCACCACTGGGCCGATATCGTTGCCGACAAGGACCTGTTGCGCCACCAGTACAAACGCCAGCAACGCAAGAAAGGCATGCCCCTGCAACTGGACGGCCAGACGCTGCACCAGCATGCCCACCCGTT > 6:227524/1‑149CTGTGAGAACACAACCCATGCCGCCACCACTGCTCCGATATCGTAGCCGACCAGGACCGGTTGCGCCACCAGTACAAACGCCAGCAACGCAAGCAAGGCATGCCCCTGCAACTGGACGACCAGACGCTGCACCAGCATGCCCACCCGT < 4:200810/148‑1 TGTGCGTACACAACCCATGCCGCCACCACTGGGCCGATATCGTTGCCGACAAGGACCTGTTGCGCCACCAGTACAAACGCCAGCAACGCAAGCAAGGCATGCCCCTGCAACTGGACGACCAGACGCTGCACCAGCATGCCCACCCGTTG > 8:191788/1‑149 gccTACCCAACCCATCCCGCCACCACCGCGCCGAACTCGTTGCCGACAAGGACCTGTTGCGCCACCAGTACACACGCCAGCAACGCAAGCAACGCATGCCCCTGCAACTGGACGACCAGACGCTGCACCACCATGCCCACCCGTTGCgg < 6:49871/146‑3 GTACACAACCCATGCCGCCACCACTGGGCCGATATCGTTGCCGCCAAGGACCTGTTGCGCCACCAGTACAAACGCCAGCAACGCAAGCCAGGCATGCCGCTGCAACTGGGCGCCCAGCCGCGGCCCCGGCATGCCCCCCGGTTGCTGGC > 5:373658/1‑149 CCATGCCGCCACCACTGGGCCGATATCGTTGCCGACAAGGACCTGTTGCGCCACCAGTACAAACGCCAGCAACGCAAGCAAGGCATGCCCCTGCAACTGGACGACCAGACGCTGCACCAGCATGCCCACCCGTTGCT < 3:7038/137‑1 CCATGCCGCCACCACTGGGCCGATATCGTTGCCGACAAGGACCTGTTGCGCCACCAGTACAAACGCCAGCAACGCAAGCAAGGCATGCCCCTGCAACTGGACGACCAGACGCTGCACCAGCATGCCCACCCGTTGCT > 4:7038/1‑137 AAACGCCAGCAACGCAAGCAAGGCATGCCCCTGCAACTGGACGACCAGACGCTGCACCAGCATGCCCACCCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGAGGCATGGGTTGT > 1:126934/1‑149 CAGCAACGCAAGCAAGGCATGCCCCTGCAACTGGACGACCAGACGCTGCACCAGCATGCCCACCCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTACG > 3:349379/1‑148 CAAGCAAGGCATGCCCCTGCAACTGGACGACCAGACGCTGCACCAGCATGCCCACCCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTACGCACAGCAAT < 4:349379/149‑1 GCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTACGCACAGCAATACCTGACTGAAACGCGACAGGCCTGCCAGTGCTTCCAGGGCCTGGGCCGGCAGCGAAGA < 5:1469/148‑1 CTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTACGCACAGCAATACCTGACTGAAACGCGACAGGCCTGCCAGTGCTTCCAGGGCCTGGGCCGGCAGCGAA > 8:13562/1‑145 GCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTACGCACAGCAATACCTGACTGAAACGCGACAGGCCTGCCAGTGCTTCCAGGGCCTGGGCCGGCAGCGAAGAGATA < 2:64808/148‑1 CTGTGCGTACACAACCCATGCCGCCACCACTGGGCCGATATCGTTGCCGACAAGGACCTGTTGCGCCACCAGTACAAACGCCAGCAACGCAAGCAAGGCATGCCCCTGCAACTGGACGACCAGACGCTGCACCAGCATGCCCACCCGTTGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5306465‑5306311‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgttgctggcGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTACGCACAGCAATACCTGACTGAAACGCGACAGGCCTGCCAGTGCTTCCAGGGCCTGGGCCGGCAGCGAAGAGATA > NC_002947/5306387‑5306532 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |