New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5306311 =	60 (1.020)	3 (0.060)	3/242	NT	5.9%	coding (941/3483 nt)	recC	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit
	?	NC_002947	5306387 =	41 (0.750)					coding (865/3483 nt)	recC	multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit

GTCGTCCTGCAGTTCGTTGAGCAGCGTGGTGGGCGAACCGTCGCTGAACAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTAC  >  NC_002947/5306163‑5306459                                                                                                                                                      |                                                                                                                                                     gtcgtcCTGCAGTTCGTTGAGCAGCGTGGTGGGCGAACCGTCGCTGAACAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTg                                                                                                                                                      >  8:139548/1‑149 (MQ=255) gtcgtcCTGCAGTTCGTTGAGCAGCGTGGTGGGCGAACCGTCGCTGAACAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTg                                                                                                                                                      >  4:146438/1‑149 (MQ=255)  tcgtcCTGCAGTTCGTTGAGCAGCGTGGTGGGCGAACCGTCGCTGAACAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGc                                                                                                                                                     <  7:139548/149‑1 (MQ=255)  tcgtcCTGCAGTTCGTTGAGCAGCGTGGTGGGCGAACCGTCGCTGAACAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGc                                                                                                                                                     >  5:124471/1‑149 (MQ=255)  tcctcCTGCAGATCGTTGAGCAGCGTGGAGGGCGACCCGTCGCTGAACAGGACGATGCGCCCCTCGCTGAACACGCACTCGAAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGGTTACCCCAGGCTg                                                                                                                                                      >  6:326563/4‑148 (MQ=255)   cgtcCTGCAGTTCGTTGAGCAGCGTGGTGGGCGAACCGTCGCTGAACAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGc                                                                                                                                                     >  8:100223/1‑148 (MQ=255)    tatctcttcgctgccggcccaggccctggaagcactggcaggcctgtcgcgtttcagtcaggtattgctgtgcgtacacaacccatgccgccaccactgggccgatatcgttgccgacaaggacctgttgcgccaccagtacaaacGc                                                                                                                                                     <  2:64808‑M1/2‑1 (MQ=255)    gtcCTGCAGTTCGTTGAGCAGCGTGGTGGGCGAACCGTCGCTGAACAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGc                                                                                                                                                     >  1:197879/1‑147 (MQ=255)    gtcCTGCAGTTCGTTGAGCAGCGTGGTGGGCGAACCGTCGCTGAACAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCa                                                                                                                                                   <  6:124471/149‑1 (MQ=255)        tcttcgctgccggcccaggccctggaagcactggcaggcctgtcgcgtttcagtcaggtattgctgtgcgtacacaacccatgccgccaccactgggccgatatcgttgccgacaaggacctgttgcgccaccagtacaaacGCCAGc                                                                                                                                                 <  5:1469‑M1/6‑1 (MQ=255)        tGCAGTTCGTTGAGCAGCGTGGTGGGCGAACCGTCGCTGAACAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCGAGCaa                                                                                                                                               >  5:365317/1‑149 (MQ=255)          ttcgctgccggcccaggccctggaagcactggcaggcctgtcgcgtttcagtcaggtattgctgtgcgtacacaacccatgccgccaccactgggccgatatcgttgccgacaaggacctgttgcgccaccagtacaaacGCCAg                                                                                                                                                  >  8:13562‑M1/141‑145 (MQ=255)               cGTTGAGCAGCGTGGTGGGCGAACCGTCGCTGAACAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCTGC‑CTTGTTTACCCCAGGCTGCGAGCAACGGGTgg                                                                                                                                        <  6:365317/149‑1 (MQ=255)                gTTGAGCAGCGTGGTGGGCGAACCGTCGCTGAACAGGTCGACGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTgg                                                                                                                                        <  2:274273/148‑1 (MQ=255)                   gAGCAGCGTGGTGGGCGAACCGTCGCTGAACAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCAt                                                                                                                                    >  7:125461/1‑149 (MQ=255)                         cGTGGTGGGCGAACCGTCTCTGAACAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGGCGAGCAGGTTGATGTAGTCGCTGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGt                                                                                                                              <  6:162556/149‑1 (MQ=255)                            ggtggGCGAACCGTCGCTGAACAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCa                                                                                                                           <  3:47952/149‑1 (MQ=255)                             gtggGCGAACCGTCGCTGAACAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCa                                                                                                                           <  8:111002/148‑1 (MQ=255)                              tggGCGAACCGTCGCTGAACAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAg                                                                                                                          >  1:11303/1‑148 (MQ=255)                              tggGCGAACCGTCGCTGAACAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGGTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAg                                                                                                                          <  2:11303/148‑1 (MQ=255)                                   gAACCGTCGCTGAACAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTg                                                                                                                    >  8:321352/1‑149 (MQ=255)                                      ccGTCGCTGAACAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGgtc                                                                                                                 <  4:317723/149‑1 (MQ=255)                                         tCGCTGAACAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGgtcgtc                                                                                                              <  7:100223/149‑1 (MQ=255)                                             tGAACAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAg                                                                                                           >  2:154143/1‑148 (MQ=255)                                               aaCAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAg                                                                                                           <  1:154143/146‑1 (MQ=255)                                                   ggTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAgg                                                                                                    <  2:348531/149‑1 (MQ=255)                                                    gTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAGCGGGTGGGCATGCTGGTGGAGCGTCTGGGCGTCCAGTTGCgggg                                                                                                   >  4:91248/1‑149 (MQ=255)                                                    gTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTgg                                                                                                                   <  5:65851/133‑1 (MQ=255)                                                    gTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTgg                                                                                                                   >  6:65851/1‑133 (MQ=255)                                                    gTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAggg                                                                                                   >  8:194953/1‑149 (MQ=255)                                                              ccGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTACTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCcttg                                                                                         <  7:194953/149‑1 (MQ=255)                                                                   gCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCttgcttgc                                                                                    <  2:197879/149‑1 (MQ=255)                                                                   attgctgtgcgtacacaacccatgccgccaccactgggccgatatcgttgccgacaaggacctgttgcgccaccagtacaaacGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCcttgcttg                                                                                     <  4:349379‑M1/66‑1 (MQ=255)                                                                    cTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGCAAGTGTTTACCCCAGGCTTCCAGCAACGGGTGGGCATGCTGGTGCAGCGTATGGTCGTCCAGTTGCAGGGGCATGCcttgctttc                                                                                    >  1:110383/1‑147 (MQ=255)                                                                       aaCACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGt                                                                                  <  2:116937/147‑1 (MQ=255)                                                                        acacGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGCCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGc                                                                               >  5:227524/1‑149 (MQ=255)                                                                         cacGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCt                                                                              <  8:125461/149‑1 (MQ=255)                                                                            gCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGc                                                                           <  7:96262/149‑1 (MQ=255)                                                                            cgtacacaacccatgccgccaccactgggccgatatcgttgccgacaaggacctgttgcgccaccagtacaaacGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTg                                                                             >  3:349379‑M1/75‑148 (MQ=255)                                                                              ccTGGTAGCTGCCTGTGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGc                                                                               <  6:285683/143‑1 (MQ=255)                                                                              ccTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGc                                                                               >  5:285683/1‑143 (MQ=255)                                                                              ccTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGt                                                                         >  7:191788/1‑149 (MQ=255)                                                                                 ggTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTg                                                                      >  1:161330/1‑149 (MQ=255)                                                                                 ggTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTACAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCctt                                                                                          <  8:189832/129‑1 (MQ=255)                                                                                 acaacccatgcctccaccactgggccgatatcgttgccgacaaggacctgttgcgccaccagtacaaacGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGttt                                                                       >  1:126934‑M1/70‑149 (MQ=255)                                                                                  gTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGGGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGttt                                                                       <  3:146438/147‑1 (MQ=255)                                                                                      cTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCttgcttgc                                                                                    <  4:246385/130‑1 (MQ=255)                                                                                      cTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCttgcttgc                                                                                    >  3:246385/1‑130 (MQ=255)                                                                                             tgtgatcatcGGTGTCGAGCATGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCTACGGGTGCGCATGGTGGTGCAGCGTCTGTTGGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTTgcgc                                                          <  5:326563/145‑1 (MQ=255)                                                                                             ggTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGgcg                                                           >  7:98671/1‑148 (MQ=255)                                                                                               tcatcaTAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCaa                                                        <  7:321352/149‑1 (MQ=255)                                                                                               tcatcaTAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCaa                                                        <  8:98671/149‑1 (MQ=255)                                                                                                 atcatAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCaa                                                        >  1:65816/1‑147 (MQ=255)                                                                                                   catAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCGGCGTCTGGTCGTCCAGTTGCAGGGGCATGCGTTGCTTGCGTTGCTGGCGTTTGTAGTGGTGGCGCagccgg                                                    >  6:243826/1‑144 (MQ=255)                                                                                                     tAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CGTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCCGGCGTGGCTTGCGTTGCTGGCGTTTGTACGGGTGGCGCAGCAGGTc                                                  >  8:188031/1‑149 (MQ=255)                                                                                                      aGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTcc                                                 >  5:201863/1‑149 (MQ=255)                                                                                                      aGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTcc                                                 >  5:196845/1‑149 (MQ=255)                                                                                                         tGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTg                                              >  7:107690/1‑149 (MQ=255)                                                                                                             gAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCt                                                                              >  4:14940/1‑113 (MQ=255)                                                                                                             gAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCt                                                                              <  3:14940/113‑1 (MQ=255)                                                                                                                cAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCaa                                       <  3:126986/149‑1 (MQ=255)                                                                                                                          tAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGc                             >  1:182868/1‑149 (MQ=255)                                                                                                                               gcgGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAgt                        >  1:133931/1‑149 (MQ=255)                                                                                                                                cgGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAgtg                       >  1:128681/1‑149 (MQ=255)                                                                                                                                        gTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCCTGCCTGGCTTGCGTCGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCTACGATATCGGCCCAGTGGTggc                  <  5:71097/147‑1 (MQ=255)                                                                                                                                          ttACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTGGCTGGCGTGTGTACTGGTGGCGCACGAGGTGCTTGTCGGCGCCGATATCGGGCCAGTGGTGGCGGCa              >  4:236471/1‑149 (MQ=255)                                                                                                                                              cccAGGCTGCCAGCAACGGTTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGTGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATggg          <  2:133931/149‑1 (MQ=255)                                                                                                                                              cccAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCg                                           <  3:258060/116‑1 (MQ=255)                                                                                                                                              cccAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCg                                           >  4:258060/1‑116 (MQ=255)                                                                                                                                              cccAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGtggtgg                   <  8:149896/140‑1 (MQ=255)                                                                                                                                              cccAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGtggtgg                   >  7:149896/1‑140 (MQ=255)                                                                                                                                              cccAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATggg          <  2:128681/149‑1 (MQ=255)                                                                                                                                                cAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGtt        <  8:107690/149‑1 (MQ=255)                                                                                                                                                cAGGCTGCCAGCAACGGGTGGGCATGCGGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTCGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTCTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGtt        <  5:243826/149‑1 (MQ=255)                                                                                                                                                     tGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTa   >  1:64808/1‑149 (MQ=255)                                                                                                                                                     tGCCAGCAACGGGAGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATACCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGAGATCGGCCCAGTGGTGGCGGCATGGGTTGTGTa   >  1:185630/1‑149 (MQ=255)                                                                                                                                                      GCCAGCAACCGGGGGGCATGCCGGGGCCGCGGCTGGGCGCCCAGTTGCAGCGGCATGCCTGGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGGCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTAc  >  5:373658‑M1/1‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                     GTCGTCCTGCAGTTCGTTGAGCAGCGTGGTGGGCGAACCGTCGCTGAACAGGTCGATGCGGCCGTCGCTGAACACGCCCTGGTAGCTGCCTGGGTCATCATAGCTGTCGAGCAGGTTGATGTAGTCGCGGC‑CTTGTTTACCCCAGGCTGCCAGCAACGGGTGGGCATGCTGGTGCAGCGTCTGGTCGTCCAGTTGCAGGGGCATGCCTTGCTTGCGTTGCTGGCGTTTGTACTGGTGGCGCAACAGGTCCTTGTCGGCAACGATATCGGCCCAGTGGTGGCGGCATGGGTTGTGTAC  >  NC_002947/5306163‑5306459

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.