| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5347295 = | 48 (0.820) | 3 (0.050) | 3/252 | NT | 6.1% | coding (717/870 nt) | PP_4703 | hypothetical protein |
| ? | NC_002947 | 5347336 = | 47 (0.830) | coding (758/870 nt) | PP_4703 | hypothetical protein | |||||
AATCAATGCCCATGCGCCGTTTGGCCCGGTGTGCCGAGCCGTCGCGCATTGCCCAGCGCAATACCGGCGCGGTGCGGCGCAGGCCCAGGCGGATCAGGCGCTGTTGCAGGGGCCCGTGCTGCAGGCCGAGCAGTGCCTGGGCCCAGCCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5347446‑5347295‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcCCCTGCAACAGCGCCTGATCCGCCTGGGCCTGCGCCGCACCGCGCCGGTATTGCGCTGGGCAATGCGCGACGGCTCGGCACACCGGGCCAAACGGCGCATGGGCATTGATTGAGCGAAAAGGTTGGCCCCTGCGGAACTGATTTAAC > NC_002947/5347336‑5347482 AATCAATGCCCATGCGCCGTTTGGCCCGGTGTGCCGAGCCGTCGCGCATTGCCCAGCGCAATACCGGCGCGGTGCGGCGCAGGCCCAGGCGGATCAGGCGCTGTTGCAGGGGCCCGTGCTGCAGGCCGAGCAGTGCCTGGGCCCAGCCG < 5:128644/149‑1 ATCAATGCCCATGCGCCGTTTGGCCCGGTGTGCCGAGCCGTCGCGCATTGCCCAGCGCAATACCGGCGCGGTGCGGCGCAGGCCCAGGCGGATCAGGCGCTGTTGCAGGGGCCCGTGCTGCAGGCCGAGCAGTGCCTGGGCCCAGCCGG > 8:283946/1‑149 TCAATGCCCATGCGCCGTTTGGCCCGGTGTGCCGAGCCGTCGCGCATTGCCCAGCGTAATACCGGCGCGGTGCGGCGCAGGCCCAGGCGGATCAGGCGCTGTTGCAGGGGCCCGTGCTGCAGGCCGAGCAGTGCCTGGGCCCAGCCGGG < 4:275877/149‑1 TCAATGCCCATGCGCCGTTTGGCCCGGTGTGCCGAGCCGTCGCGCATTGCCCAGCGCAATACCGGCGCGGTGCGGCGCAGGCCCAGGCGGATCAGGCGCTGTTGCAGGGGCCCGTGCTGCAGGCCGAGCAGTGCCTGGGCCCAGCCGGG > 1:260506/1‑149 AATGCCCATGCGCCGTTTGGCCCGGTGTGCCGAGCCGTCGCGCATTGCCCAGCGCAATACCGGCGCGGTGCGGCGCAGGCCCAGGCGGATCAGGCGCTGTTGCAGGGGCCCGTGCTGCAGGCCGAGCAGTGCCTGGGCCCAGCCGGGC < 3:268223/148‑1 GGCCCGGTGTGCCGAGCCGTCGCGCATTGCCCAGCGTAATACCGGCGCGGTGCGGCGCAGGCCCAGGCGGATCAGGCGCTGTTGCAGGGGCCCGTGCTGCAGGCCGAGCAGTGCCTGGGCCCAGCCGGG < 7:5211/129‑1 GGCCCGGTGTGCCGAGCCGTCGCGCATTGCCCAGCGTAATACCGGCGCGGTGCGGCGCAGGCCCAGGCGGATCAGGCGCTGTTGCAGGGGCCCGTGCTGCAGGCCGAGCAGTGCCTGGGCCCAGCCGGG > 8:5211/1‑129 GGGGCCCGTGCTGCAGGCCGAGCAGTGCCTGGGCCCAGCCGGGCCCCTGCAACAGCGCCTGATCCGCCTGGGCCTGCGCCGCACCGCGCCGGTATTGCGCTGGGCAATGCGCGACGGCTCGGCACACCGGGCCAAACGGCGCATGGGCA > 6:139092/1‑149 CCCGTGCTGCAGGCCGAGCAGTGCCTGGGCCCAGCCGGGCCCCTGCAACAGCGCCTGATCCGCCTGGGCCTGCGCCGCACCGCGCCGGTATTGCGCTGGGCAATGCGCGACGGCTCGGCACACCGGGCCAAACGGCGCATGGGCATTGA > 5:45843/1‑149 CCCGTGCTGCAGGCCGAGCAGTGCCTGGGCCCAGCCGGGCCCCTGCAACAGCGCCTGATCCGCCTGGGCCTGCGCCGCACCGCGCCGGTATTGCGCTGGGCAATGCGCGACGGCTCGGCACACCGGGCCAAACGGCGCATGGGCATTGA < 6:45843/149‑1 GCCCCTGCAACAGCGCCTGATCCGCCTGGGCCTGCGCCGCACCGCGCCGGTATTGCGCTGGGCAATGCGCGACGGCTCGGCACACCGGGCCAAACGGCGCATGGGCATTGATTGAGCGAAAAGGTTGGCCCCTGCGGAACTGATTTAAC > 4:243371/1‑149 AATCAATGCCCATGCGCCGTTTGGCCCGGTGTGCCGAGCCGTCGCGCATTGCCCAGCGCAATACCGGCGCGGTGCGGCGCAGGCCCAGGCGGATCAGGCGCTGTTGCAGGGGCCCGTGCTGCAGGCCGAGCAGTGCCTGGGCCCAGCCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5347446‑5347295‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggcCCCTGCAACAGCGCCTGATCCGCCTGGGCCTGCGCCGCACCGCGCCGGTATTGCGCTGGGCAATGCGCGACGGCTCGGCACACCGGGCCAAACGGCGCATGGGCATTGATTGAGCGAAAAGGTTGGCCCCTGCGGAACTGATTTAAC > NC_002947/5347336‑5347482 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |