New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5404550	72 (1.220)	4 (0.070)	4/246	NT	5.7%	coding (670/801 nt)	PP_4748	amino acid ABC transporter substrate‑binding protein
	?	NC_002947	= 5404646	64 (1.160)					coding (574/801 nt)	PP_4748	amino acid ABC transporter substrate‑binding protein

CTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAGGCCAAACGAGGCGAGGATTTCTGCGATTTCGCCCGAGGCGTGCAAGGCCTGGATATTCTTGCCCAGTGCCTCGCCCAGGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5404400‑5404550 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agggcggcTACCCCGGCAAGAGCATCAAGGTGTCCGAGCCCGATCAACGGGTCAAGGCCACGCTTGAGCCCGGGCAGAGCGCCTTCCCGTACACCAAGGCCAACGCCGCCCTGGGCGAGGCACTGGGCAAGAATATCCAGGCCTTGCACGC  <  NC_002947/5404646‑5404504                                                                                                                                                                                                                                                                                                        CTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAGGCCAAACGAGGCGAGGATTTCTGCGATTTCGCCCGAGGCGTGCAAGGCCTGGATATTCTTGCCCAGTGCCTCGCCCAGGGCG                                                                                                                                                   >  6:18132/1‑149  TACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAGGCCAAACGAGGCGAGGATTTCTGCGATTTCGCCCGAGGCGTGCAAGGCCTGGATATTCTTGCCCAGTGCCTCGCCCAGGGCGG                                                                                                                                                  >  4:244412/1‑149                                           CCACTTTTGCAGCCTCGCGGTCCAGGCCAAACGAGGCGAGGATTTCTGCGATTTCGCCCGAGGCGTGCAAGGCCTGGATATTCTTGCCCAGTGCCTCGCCCAGGGCGGCTACCCCGGCAAGAGCATCAAGGTGTCCGAGCCCGATCAAC                                                                                                         >  3:357392/1‑149                                                                      CAAACGAGGCGAGGATTTCTGCGATTTCGCCCGAGGCGTGCAAGGCCTGGATATTCTTGCCCAGTGCCTCGCCCAGGGCGGCTACCCCGGCAAGAGCATCAAGGTGTCCGAGCCCGATCAACGGGTCAAGGCCACGCTTGAGCCCGGG                                                                               >  4:242341/1‑148                                                                                                           GTGCAAGGCCTGGATATTCTTGCCCAGTGCCTCGCCCAGGGCGGCTACCCCGGCAAGAGCATCAAGGTGTCCGAGCCCGATCAACGGGTCAAGGCCACGCTTGAGCCCGGGCAGAGCGCCTTCCCGTACACCAAGGCCAACGCCGCCCT                                         <  4:357392/149‑1                                                                                                                AGGCCTGGATATTCTTGCCCAGTGCCTCGCCCAGGGCGGCTACCCCGGCAAGAGCATCAAGGTGTCCGAGCCCGATCAACGGGTCAAGGCCACGCTTGAGCCCGGGCAGAGCGCCTTCCCGTACACCAAGGCCAACGCCGCCCTGGGCG                                    <  3:242341/149‑1                                                                                                                                                  GGCGGCTACCCCGGCAAGAGCATCAAGGTGTCCGAGCCCGATCAACGGGTCAAGGCCACGCTTGAGCCCGGGCAGAGCGCCTTCCCGTACACCAAGGCCAACGCCGCCCTGGGCGAGGCACTGGGCAAGAATATCCAGGCCTTGCACGC  <  8:126672/149‑1                                                                                                                                                                                                                                                                                                        CTACGGGATTTGATTGTCTTTACTGAATCATCCTCGGCTCCCCCACTTTTGCAGCCTCGCGGTCCAGGCCAAACGAGGCGAGGATTTCTGCGATTTCGCCCGAGGCGTGCAAGGCCTGGATATTCTTGCCCAGTGCCTCGCCCAGGGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5404400‑5404550 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agggcggcTACCCCGGCAAGAGCATCAAGGTGTCCGAGCCCGATCAACGGGTCAAGGCCACGCTTGAGCCCGGGCAGAGCGCCTTCCCGTACACCAAGGCCAACGCCGCCCTGGGCGAGGCACTGGGCAAGAATATCCAGGCCTTGCACGC  <  NC_002947/5404646‑5404504

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.