| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5630789 | 45 (0.760) | 4 (0.070) | 4/252 | NT | 7.9% | coding (319/3954 nt) | putA | proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase |
| ? | NC_002947 | = 5630885 | 50 (0.880) | coding (415/3954 nt) | putA | proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase | |||||
GCCAGCAACCCGGCCGACGATGCCGGTGAAGTCCAGGCCGACCACAGCCACCAGTGCTTCCTCGAATTTGCCGAGAGCATCTTGCCGCAGTCGGTACTGCGCTCGGCGATCACCGCCGCCTACCGCCGCCCCGAGCAGGAAGTGGTGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5630639‑5630789‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgaCGCTTTTCTGGTTGCGCAGTTTTTCGGCAATGCTTGCGGCCAGCTTGTTGGTGGCGTCGGCCAGCGGCGCGCTCAGGCGCGCCTGCTCCAGCAGCATCGGCACCACTTCCTGCTCGGGGCGGCGGTAGGCGGCGGTGATCGCCGAGC < NC_002947/5630885‑5630739 GCCAGCAACCCGGCCGACGATGCCGGTGAAGTCCAGGCCGACCACAGCCACCAGAGCTTCCTCGAATTTGCCGAGAGCATCTTGCCGCAGTCGGTACTGCGCTCGCCGATCACCGCCGCCTACCGCCGCCCCGAGCAGGAAGTGGTGCC > 5:332546/1‑149 CGAGAGCATCTTGCCGCAGTCGGTACTGCGCTCGGCGATCACCGCCGCCTACCGCCGCCCCGAGCAGGAAGTGGTGCCGACGCTTTTCTGGTTGCGCAGTTTTTCGGCAATGCTTGCGGCCAGCTTGTTGGTGGCGTCGGCCAGCGGCG > 7:125488/1‑149 ATCTTGCCGCAGTCGGTACTGCGCTCGGCGATCACCGCCGCCTACCGCCGCCCCGAGCAGGAAGTGGTGCCGACGCTTTTCTGGTTGCGCAGTTTTTCGGCAATGCTTGCGGCCAGCTTGTTGGTGGCGTCGGCCAGCGGCGCGCTCAG > 7:323305/1‑149 CGCTCGGCGATCACCGCCGCCTACCGCCGCCCCGAGCAGGAAGTGGTGCCGACGCTTTTCTGGTTGCGCAGTTTTTCGGCAATGCTTGCGGCCAGCTTGTTGGTGGCGTCGGCCAGCGGCGCGCTCAGGCGCGCCTGCTCCAGCAGCAT < 8:323305/149‑1 ATCACCGCCGCCTACCGCCGCCCCGAGCAGGAAGTGGTGCCGACGCTTTTCTGGTTGCGCAGTTTTTCGGCAATGCTTGCGGCCAGCTTGTTGGTGGCGTCGGCCAGCGGCGCGCTCAGGCGCGCCTGCTCCAGCAGCATCGGCACCAC < 8:125488/149‑1 GACGCTTTTCTGGTTGCGCAGTTTTTCGGCAATGCTTGCGGCCAGCTTGTTGGTGGCGTCGGCCAGCGGCGCGCTCAGGCGCGCCTGCTCCAGCAGCATCGGCACCACTTCCTGCTCGGGGCGGCGGTAGGCGGCGGTGATCGCCGAGC < 3:197784/149‑1 GACGCTTTTCTGGTTGCGCAGTTTTTCGGCAATGCTTGCGGCCAGCTTGTTGGTGGCGTCGGCCAGCGGCGCGCTCAGGCGCGCCTGCTCCAGCAGCATCGGCACCACTTCCTGCTCGGGGCGGCGGTAGGCGGCGGTGATCGCCGAGC < 8:153256/149‑1 GACGCTTTTCTGGTTGCGCAGTTTTCCGGCAATGCTTGCGGCCAGCTTGTTGGTGGCGTCGGCCAGCGGCGCGCTCAGGCGCGCCTGCTCCAGCAGCATCGGCACCACTTCCTGCTCGGGGCGGCGGTAGGCGGCGGTGATCGCCGAGC > 7:79467/1‑149 GCCAGCAACCCGGCCGACGATGCCGGTGAAGTCCAGGCCGACCACAGCCACCAGTGCTTCCTCGAATTTGCCGAGAGCATCTTGCCGCAGTCGGTACTGCGCTCGGCGATCACCGCCGCCTACCGCCGCCCCGAGCAGGAAGTGGTGCCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5630639‑5630789‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgaCGCTTTTCTGGTTGCGCAGTTTTTCGGCAATGCTTGCGGCCAGCTTGTTGGTGGCGTCGGCCAGCGGCGCGCTCAGGCGCGCCTGCTCCAGCAGCATCGGCACCACTTCCTGCTCGGGGCGGCGGTAGGCGGCGGTGATCGCCGAGC < NC_002947/5630885‑5630739 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |