New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5671615 = | 32 (0.540) | 4 (0.080) | 4/214 | NT | 14.5% | intergenic (+34/‑136) | PP_4978/PP_4979 | hypothetical protein/substrate‑binding protein |
? | NC_002947 | 5671700 = | 21 (0.440) | intergenic (+119/‑51) | PP_4978/PP_4979 | hypothetical protein/substrate‑binding protein |
GGATCCAGAACAGACGGGCGATATGTGGCATGGCCGGAGATTACGCGCTCGGCCGGTGTACGGTAAAGGCATGCATTATCGATGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5671781‑5671615 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcacgcccgctcccacaTCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAACGCTTGCGCCTGGTAACCGACGACTGG > NC_002947/5671700‑5671846 GGATCCAGAACAGACGGGCGATATGTGGCATGGCCGGAGATTACGCGCTCGGCCGGTGTACGGTAAAGGCATGCATTATCGATGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCG < 3:283869/149‑1 GGATCCAGAACAAACGGGCGATATGTGGCATGGCCGGAGATTACGCGCTCGGCCGGTGTACGGTAAAGGCATGCATTATCGATGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCG < 8:311692/149‑1 ATCCAGAACAGACGGGCGATATGTGGCATGGCCGGAGATTACGCGCTCGGCCGGTGTACGGTAAAGGCATGCATTATCGATGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGG > 1:332825/1‑149 TCCAGAACAGACGGGCGATATGTGGCATGGCCGGAGATTACGCGCTCGGCCGGTGTACGGTAAAGGCATGCATTATCGATGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGG < 2:332825/148‑1 CCAGAACAGACGGGCGATATGTGGCATGGCCGGAGATTACGCGCTCGGCCGGTGTACGGTAAAGGCATGCATTATCGATGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTAGCGGGCA > 5:36026/1‑149 AGAACAGACGGGCGATATGTGGCATGGCCGGAGATTACGCGCTCGGCCGGTGTACGGTAAAGGCATGCATTATCGATGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACG > 3:235226/1‑149 GCGATATGTGGCATGGCCGGAGATTACGCGCTCGGCCGGTGTACGGTAAAGGCATGCATTATCGATGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCCAC < 7:189471/149‑1 ATATGTGGCATGGCCGGAGATTACGCGCTCGGCCGGTGTACGGTAAAGGCATGCATTATCGATGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCCACATC < 5:338322/149‑1 CGCGCTCGGCCGGTGTACGGTAAAGGCATGCATTATCGATGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCG > 4:208384/1‑104 CGCGCTCGGCCGGTGTACGGTAAAGGCATGCATTATCGATGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCG < 3:208384/104‑1 GCGCTCGGCCGGTGTACGGTAAAGGCATGCATTATCGATGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGC > 3:312626/1‑116 GCGCTCGGCCGGTGTACGGTAAAGGCATGCATTATCGATGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGC < 4:312626/116‑1 GCGTGCCCGCGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTC > 2:50267/1‑149 GCCCGCGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGA > 2:323743/1‑149 CGCGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCC < 1:50267/149‑1 CGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTT < 1:146669/149‑1 CGCGGGCACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAACCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAACGCTTGC < 4:204897/149‑1 CACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAACGCTTGCGCCTGG < 6:136401/149‑1 ACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAACGCTTGCGCCTGGa > 2:29319/1‑148 ACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAACGCTTGCGCCTGG > 2:62480/1‑148 ACGCCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAACGCTTGCGCCTGG > 7:293916/1‑148 CCCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGACCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAACGCTTGCGCCTGGTAAC > 1:353600/1‑149 CCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAACGCTTGCGCCTGGTAACC > 5:81538/1‑149 CCGCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCACGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAACGCTTGCGCCTGGTAACC > 7:202012/1‑149 GCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAACGCTTGCGCC > 4:176700/1‑139 GCTCCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAACGCTTGCGCC < 3:176700/139‑1 cgcaCACATCGATAATGCATGCCTTTACCGTACACCGGCGGAGCGCGTAATCTCCGGCCATGCCACATATCGGCCGTCTGTTCTGGATCCTGCTTCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAACGCTTGCGCCTGGTAACCGAC < 4:258812/145‑1 CCCACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAACGCTTGCGCCTGGTAACCGACGA > 1:257917/1‑149 ACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAACGCTTGC > 4:252851/1‑130 ACATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAACGCTTGC < 3:252851/130‑1 CATCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAACGCTTGCGCCTGGTAACCGACGACTGG < 1:323743/149‑1 GGATCCAGAACAGACGGGCGATATGTGGCATGGCCGGAGATTACGCGCTCGGCCGGTGTACGGTAAAGGCATGCATTATCGATGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCAACGATCGGGTTGCTCTCTTCGCGGGCACGCCCGCTCCCACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5671781‑5671615 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcacgcccgctcccacaTCGATAATGCATGCCTTTACCGTACACCGGCCGAGCGCGTAATCTCCGGCCATGCCACATATCGCCCGTCTGTTCTGGATCCTGCTGCTCGTTTGCCTGAGCCCGTTGGCTCTGGGCGAACGCTTGCGCCTGGTAACCGACGACTGG > NC_002947/5671700‑5671846 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |