New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5727157 =	72 (1.220)	4 (0.070)	4/248	NT	5.3%	coding (1481/1680 nt)	opgG	glucans biosynthesis protein G
	?	NC_002947	5727201 =	74 (1.330)					coding (1437/1680 nt)	opgG	glucans biosynthesis protein G

CAGATCAGCGTGGGCGACAACGCCGAGGTGGTCGAGAACAATCTGCGCTATAACCCTGAGACCAAGGGCTGGCGCCTGACCCTGCGCCTGAAGGTCAAGGAAGCCAACAAGTCGACCGAAATGCGCGCCGCACTGGTGCGTGATGTACCGGTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5727311‑5727157 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtcgaCTTGTTGGCTTCCTTGACCTTCAGGCGCAGGGTCAGGCGCCAGCCCTTGGTCTCAGGGTTATAGCGCAGATTGTTCTCGACCACCTCGGCGTTGTCGCCCACGCTGATCTGGCTGCGCACGGCGGCGTCTTCCGGCAGGGCGGCAAGC  >  NC_002947/5727201‑5727348                                                                                                                                                                                                                                                                                                                 CAGATCAGCGTGGGCGACAACGCCGAGGTGGTCGAGAACAATCTGCGCTATAACCCTGAGACCAAGGGCTGGCGCCTGACCCTGCGCCTGAAGGTCAAGGAAGCCAACAAGTCGACCGAAATGCGCGCCGCACTGGTGCGTGATGTACC                                                                                                                                                            <  3:248191/149‑1     TCAGCGTGGGCGACAACGCCGAGGTGGTCGAGAACAATCTGCGCTATAACCCTGAGACCAAGGGCTGGCGCCTGACCCTGCGCCTGAAGGTCAAGGAAGCCAACAAGTCGACCGAAATGCGCGCCGCACTGGTGCGTGATGTACCGGTC                                                                                                                                                        <  7:90634/149‑1       AGCGTGGGCGACAACGCCGAGGTGGTCGAGAACAATCTGCGCTATAACCCTGAGACCAAGGGCTGGCGCCTGACCCTGCGCCTGAAGGTCAAGGAAGCCAACAAGTCGACCGAAATGCGCGCCGCACTGGTGCGTGATGTACCGGTCGA                                                                                                                                                      <  8:219087/149‑1                                                                                                                TCGACCGAAATGCGCGCCGCACTGGTGCGTGATGTACCGGTCGACTTGTTGGCTTCCTTGACCTTCAGGCGCAGGGTCAGGCGCCAGCCCTTGGTCTCAGGGTTATAGCGCAGATTGTTCTCGACCACCTC                                                               <  1:343900/131‑1                                                                                                                TCGACCGAAATGCGCGCCGCACTGGTGCGTGATGTACCGGTCGACTTGTTGGCTTCCTTGACCTTCAGGCGCAGGGTCAGGCGCCAGCCCTTGCTCTCAGGGTTATAGCGCAGATAGTTCTCGACCACCTC                                                               >  2:343900/1‑131                                                                                                                  GACCGAAATGCGCGCCGCACTGGTGCGTGATGTACCGGTCGACTTGTTGGCTTCCTTGACCTTCAGGCGCAGGGTCAGGCGCCAGCCCTTGGTCTCAGGGTTATAGCGCAGATTGTTCTCGACCACCTCGGCGTT                                                         >  3:205698/1‑135                                                                                                                  GACCGAAATGCGCGCCGCACTGGTGCGGGATGTACCGGTCGACTTGTTGGCTTCCTTGACCTTCAGGCGCAGGGTCAGGCGCCAGCCCTTGGTCTCAGGGTTATAGCGCAGATTGTTCTCGACCACCTCGGCGTT                                                         <  4:205698/135‑1                                                                                                                                                     CGGTCGACTTGTTGGCTTCCTTGACCTTCAGGCGCAGGGTCAGGCGCCAGCCCTTGGTCTCAGGGTTATAGCGCAGATTGTTCTCGACCACCTCGGCGTTGTCGCCCACGCTGATCTGGCTGCGCACGGCGGCGTCTTCCGG               <  5:39706/142‑1                                                                                                                                                     CGGTCGACTTGTTGGCTTCCTTGACCTTCAGGCGCAGGGTCAGGCGCCAGCCCTTGGTCTCAGGGTTATAGCGCAGATTGTTCTCGACCACCTCGGCGTTGTCGCCCACGCTGATCTGGCTGCGCACGGCGGCGTCTTCCGG               >  6:39706/1‑142                                                                                                                                                      GGTCGACTTGTTGGCTTCCTTGACCTTCAGGCGCAGGGTCAGGCGCCAGCCCTTGGTCTCAGGGTTATAGCGCAGATTGTTCTCGACCACCTCGGCGTTGTCGCCCACGCTGATCTGGCTGCGCACGGCGGCGTCTTCCGGCAGGGCGG       >  3:159227/1‑149                                                                                                                                                           ACTTGTTGGCTTCCTTGACCTTCAGGCGCAGGGTCAGGCGCCAGCCCTTGGTCTCAGGGTTATAGCGCAGATTGTTCTCGACCACCTCGGCGTTGTCGCCCACGCTGATCTGGCTGCGCACGGCGGCGTCTTCCGGCAGGGCGGCAAGC  <  4:318871/149‑1                                                                                                                                                           ACTTGTTGGCTTCCTTGACCTTCAGGCGCAGGGTCAGGCGCCAGCCCTTGGTCTCAGGGTTATAGCGCAGATTGTTCTCGACCACCTCGGCGTTGTCGCCCACGCTGATCTGGCTGCGCACGGCGGCGTCTTCCGGCAGGGCGGCAAGC  >  5:124920/1‑149                                                                                                                                                           ACTTGTTGGCTTCCTTGACCTTCAGGCGCAGGGTCAGGCGCCAGCCCTTGGTCTCAGGGTTATAGCGCAGATTGTTCTCGACCACCTCGGCGTTGTCGCCCACGCTGATCTGGCTGCGCACGGCGGCGTCTTCCGGCAGGGCGGCAAGC  <  7:304324/149‑1                                                                                                                                                                                                                                                                                                                 CAGATCAGCGTGGGCGACAACGCCGAGGTGGTCGAGAACAATCTGCGCTATAACCCTGAGACCAAGGGCTGGCGCCTGACCCTGCGCCTGAAGGTCAAGGAAGCCAACAAGTCGACCGAAATGCGCGCCGCACTGGTGCGTGATGTACCGGTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5727311‑5727157 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggtcgaCTTGTTGGCTTCCTTGACCTTCAGGCGCAGGGTCAGGCGCCAGCCCTTGGTCTCAGGGTTATAGCGCAGATTGTTCTCGACCACCTCGGCGTTGTCGCCCACGCTGATCTGGCTGCGCACGGCGGCGTCTTCCGGCAGGGCGGCAAGC  >  NC_002947/5727201‑5727348

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.