| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5864831 | 45 (0.760) | 4 (0.070) | 4/248 | NT | 8.1% | coding (1320/2253 nt) | cadA‑III | cadmium translocating P‑type ATPase |
| ? | NC_002947 | = 5864859 | 48 (0.860) | coding (1292/2253 nt) | cadA‑III | cadmium translocating P‑type ATPase | |||||
GCGCGGGACACCGGGTGGTCCGAACGCTCGCCCAGGCTGGCCGCCAAGGCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5864679‑5864831‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaaggGTGGCGTGTACCTGGAGGGTGGCCGCCACCTTGATTTCCTGGCCCTGGACAAGACCGGCACCATCACCCATGGCAAGCCGGTGCAGACCGACGCCAAGGTGCTGGCGCCGCTGTTCGAAGACCGTGCGCAAGCCTTGGCGGC < NC_002947/5864859‑5864718 GCGCGGGACACCGGGTGGTCCGAACGCTCGCCCAGGCTGGCCGCCAAGGCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAAT < 2:125804/148‑1GCGCGGGACACCGGGTGGTCCGAACGCTCGCCCAGGCTGGCCGCCAAGGCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAAT > 3:281429/1‑148 CGCGGGACACCGGGTGGTCCGAACGCTCGCCCAGGCTGGCCGCCAAGGCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCA < 5:287513/149‑1 GCCCAGGCTGGCCGCCAAGGCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCA < 7:60479/121‑1 GCCCAGGCTGGCCGCCAAGGCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCA > 8:60479/1‑121 CAAGGCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGGTGGCGTGTACCTGGAGGGTGGCCGCCACCTTGATTTCC > 7:223568/1‑148 CAAGGCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGGTGGCGTGTACCTGGAGGGTGGCCGCCACCTTGATTTCC < 8:223568/148‑1 ACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATC > 5:325739/1‑82 ACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATC < 6:325739/82‑1 ACCTTGGCGTCGGTCTGCACAGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGGTGGCGTGTACCTGGAGGGTGGCCGCCACCTTGA > 3:260232/1‑106 ACCTTGGCGTCGGTCTGCACAGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGGTGGCGTGTACCTGGAGGGTGGCCGCCACCTTGA < 4:260232/106‑1 ATCAAGGGTGGCGTGTACCTGGAGGGTGGCCGCCACCTTGATTTCCTGGCCCTGGACAAGACCGGCACCATCACCCATGGCAAGCCGGTGCAGACCGACGCCAAGGTGCTGGCGCCGCTGTTCGAAGACCGTGCGCAAGCCTTGGCGGC > 1:149920/1‑149 ATCAAGGGTGGCGTGTACCTGGAGGGTGGCCGCCACCTTGATTTCCTGGCCCTGGACAAGACCGGCACCATCACCCATGGCAAGCCGGTGCAGACCGACGCCAAGGTGCTGGCGCCGCTGTTCGAAGACCGTGCGCAAGCCTTGGCGGC < 1:150740/149‑1 GCGCGGGACACCGGGTGGTCCGAACGCTCGCCCAGGCTGGCCGCCAAGGCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5864679‑5864831‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcaaggGTGGCGTGTACCTGGAGGGTGGCCGCCACCTTGATTTCCTGGCCCTGGACAAGACCGGCACCATCACCCATGGCAAGCCGGTGCAGACCGACGCCAAGGTGCTGGCGCCGCTGTTCGAAGACCGTGCGCAAGCCTTGGCGGC < NC_002947/5864859‑5864718 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |