New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5864831 | 45 (0.760) | 4 (0.070) | 4/248 | NT | 8.1% | coding (1320/2253 nt) | cadA‑III | cadmium translocating P‑type ATPase |
? | NC_002947 | = 5864859 | 48 (0.860) | coding (1292/2253 nt) | cadA‑III | cadmium translocating P‑type ATPase |
GCCGCCAAGGCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGGCGCCAGCCAGGAA > NC_002947/5864718‑5865004 | gccgccAAGGCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACccttgat > 1:149920‑M2/1‑142 (MQ=255) gccgccAAGGCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACccttgat < 1:150740‑M2/149‑8 (MQ=255) cgccAAGGCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGGCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCa < 3:211713/149‑1 (MQ=255) aaGGCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGAt < 2:252828/149‑1 (MQ=255) gCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGcc > 7:289569/1‑149 (MQ=255) gCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGcc < 5:289435/149‑1 (MQ=255) cTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑t < 6:199454/149‑1 (MQ=255) cTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑t < 5:46848/149‑1 (MQ=255) ttCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGc > 6:208445/1‑134 (MQ=255) ttCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGc < 5:208445/134‑1 (MQ=255) aGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑t < 4:139322/129‑1 (MQ=255) aGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑t > 3:139322/1‑129 (MQ=255) aGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCggccag < 2:343601/149‑1 (MQ=255) gcggcgCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCggccagg < 1:278891/149‑1 (MQ=255) aGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGAc < 8:289569/149‑1 (MQ=255) gTCGGTCTGCACCGGCTTGCCTTGTGTGATTGGGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCGCACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCAc < 1:76897/135‑1 (MQ=255) gTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCg < 3:182787/149‑1 (MQ=255) gTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGCATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCAc > 2:76897/1‑134 (MQ=255) cACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTGACCGGGGTc > 4:208447/1‑145 (MQ=255) cACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTc > 4:49496/1‑145 (MQ=255) ggCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCAc < 3:49496/149‑1 (MQ=255) ttGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAg > 1:26548/1‑149 (MQ=255) cATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAgcgcg > 3:199037/1‑149 (MQ=255) tGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACgtg < 2:150740/149‑3 (MQ=255) tGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAg < 1:237211/149‑1 (MQ=255) ggTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAgg > 7:199174/1‑149 (MQ=255) ggTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAgg > 5:70412/1‑149 (MQ=255) tGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACcag < 6:70412/148‑1 (MQ=255) cAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAgcagca > 5:99796/1‑149 (MQ=255) aGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCAc > 2:88623/1‑149 (MQ=255) ccAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAg < 2:26548/149‑1 (MQ=255) cAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCCTTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAg > 1:290088/1‑149 (MQ=255) ggAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACccttgatttcctggccctggacaagaccggcaccatcacccatggcaagccggtgcagaccgacgccaaggtgctggcgccgctgttcgaagaccgtgcgcaagccttg < 8:223568‑M2/148‑110 (MQ=255) ggAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACccttgatttcctggccctggacaagaccggcaccatcacccatggcaagccggtgcagaccgacgccaaggtgctggcgccgctgttcgaagaccgtgcgcaagccttg > 7:223568‑M2/1‑39 (MQ=255) ggAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGgcg > 6:68288/1‑149 (MQ=255) ggAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGgcg > 4:146966/1‑149 (MQ=255) gAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGgcgc < 6:99796/149‑1 (MQ=255) aTCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCgaga > 6:375622/1‑101 (MQ=255) aTCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCgaga < 5:375622/101‑1 (MQ=255) tCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACccttgatttcctggccctggacaagaccggcaccatcacccatggcaagcctgtgcagaccgacgccaaggt > 3:260232‑M2/1‑34 (MQ=255) tCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACccttgatttcctggccctggacaagaccggcaccatcacccatggcaagcctgtgcagaccgacgccaaggt < 4:260232‑M2/106‑73 (MQ=255) aaGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTaaa < 4:199037/149‑1 (MQ=255) cggcCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGc > 5:58356/1‑113 (MQ=255) cggcCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGc < 6:58356/113‑1 (MQ=255) ggcCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTc > 5:63307/1‑148 (MQ=255) ggcCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTc > 5:221185/1‑148 (MQ=255) tCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGgc > 5:108360/1‑149 (MQ=255) cAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGgcgc > 3:290193/1‑149 (MQ=255) aGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGgcgc > 1:129848/1‑148 (MQ=255) ggTACACGC‑GACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGAGGCCAGTCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCTGTAAACCCAGTGGAACCAGGCgcca < 6:63307/149‑1 (MQ=255) acGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGGCGccagccag < 2:182226/149‑1 (MQ=255) acGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGGCGccagccag > 1:182226/1‑149 (MQ=255) cGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGGCGccagccag > 3:146080/1‑148 (MQ=255) cGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGGCGCCAGCCAgg < 3:146966/149‑1 (MQ=255) cGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGGCGCCAGCCAgg < 5:68288/149‑1 (MQ=255) gC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAgg > 6:118250/1‑137 (MQ=255) gC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAgg < 5:118250/137‑1 (MQ=255) gC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGGCGCCAGCCAgg > 2:139938/1‑148 (MQ=255) gC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACC‑GGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGGCGCCAGCCAGGaa > 3:145502/1‑149 (MQ=255) | GCCGCCAAGGCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGC‑CACCCTTGATCAGGATGCC‑TTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGGCGCCAGCCAGGAA > NC_002947/5864718‑5865004 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |