New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 586483145 (0.760)4 (0.070) 4/248 NT 8.1% coding (1320/2253 nt) cadA‑III cadmium translocating P‑type ATPase
?NC_002947 = 5864859 48 (0.860)coding (1292/2253 nt) cadA‑III cadmium translocating P‑type ATPase

GCCGCCAAGGCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGGCGCCAGCCAGGAA  >  NC_002947/5864718‑5865004
                                                                                                                                              |                                                                                                                                                  
gccgccAAGGCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACccttgat                                                                                                                                             >  1:149920‑M2/1‑142 (MQ=255)
gccgccAAGGCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACccttgat                                                                                                                                             <  1:150740‑M2/149‑8 (MQ=255)
  cgccAAGGCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGGCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCa                                                                                                                                           <  3:211713/149‑1 (MQ=255)
      aaGGCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGAt                                                                                                                                       <  2:252828/149‑1 (MQ=255)
         gCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGcc                                                                                                                                    >  7:289569/1‑149 (MQ=255)
         gCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGcc                                                                                                                                    <  5:289435/149‑1 (MQ=255)
          cTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCt                                                                                                                                  <  6:199454/149‑1 (MQ=255)
          cTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCt                                                                                                                                  <  5:46848/149‑1 (MQ=255)
                       ttCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGc                                                                                                                                     >  6:208445/1‑134 (MQ=255)
                       ttCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGc                                                                                                                                     <  5:208445/134‑1 (MQ=255)
                              aGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCt                                                                                                                                  <  4:139322/129‑1 (MQ=255)
                              aGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCt                                                                                                                                  >  3:139322/1‑129 (MQ=255)
                              aGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCggccag                                                                                                              <  2:343601/149‑1 (MQ=255)
                               gcggcgCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCggccagg                                                                                                             <  1:278891/149‑1 (MQ=255)
                                       aGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGAc                                                                                                     <  8:289569/149‑1 (MQ=255)
                                                  gTCGGTCTGCACCGGCTTGCCTTGTGTGATTGGGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCGCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCAc                                                                                                         <  1:76897/135‑1 (MQ=255)
                                                  gTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCg                                                                                          <  3:182787/149‑1 (MQ=255)
                                                  gTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGCATGCCTTTGCGCGCGGCGGCGGCCAGGCCAc                                                                                                         >  2:76897/1‑134 (MQ=255)
                                                           cACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTGACCGGGGTc                                                                                     >  4:208447/1‑145 (MQ=255)
                                                           cACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTc                                                                                     >  4:49496/1‑145 (MQ=255)
                                                               ggCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCAc                                                                             <  3:49496/149‑1 (MQ=255)
                                                                  ttGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAg                                                                          >  1:26548/1‑149 (MQ=255)
                                                                      cATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAgcgcg                                                                      >  3:199037/1‑149 (MQ=255)
                                                                            tGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACgtg                                                                <  2:150740/149‑3 (MQ=255)
                                                                               tGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAg                                                             <  1:237211/149‑1 (MQ=255)
                                                                                ggTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAgg                                                            >  7:199174/1‑149 (MQ=255)
                                                                                ggTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAgg                                                            >  5:70412/1‑149 (MQ=255)
                                                                                           tGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACcag                                                  <  6:70412/148‑1 (MQ=255)
                                                                                               cAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAgcagca                                             >  5:99796/1‑149 (MQ=255)
                                                                                                aGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCAc                                            >  2:88623/1‑149 (MQ=255)
                                                                                                    ccAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAg                                        <  2:26548/149‑1 (MQ=255)
                                                                                                     cAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAg                                        >  1:290088/1‑149 (MQ=255)
                                                                                                       ggAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACccttgatttcctggccctggacaagaccggcaccatcacccatggcaagccggtgcagaccgacgccaaggtgctggcgccgctgttcgaagaccgtgcgcaagccttg                                       <  8:223568‑M2/148‑110 (MQ=255)
                                                                                                       ggAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACccttgatttcctggccctggacaagaccggcaccatcacccatggcaagccggtgcagaccgacgccaaggtgctggcgccgctgttcgaagaccgtgcgcaagccttg                                       >  7:223568‑M2/1‑39 (MQ=255)
                                                                                                       ggAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGgcg                                     >  6:68288/1‑149 (MQ=255)
                                                                                                       ggAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGgcg                                     >  4:146966/1‑149 (MQ=255)
                                                                                                        gAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGgcgc                                    <  6:99796/149‑1 (MQ=255)
                                                                                                           aTCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCgaga                                                                                 >  6:375622/1‑101 (MQ=255)
                                                                                                           aTCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCgaga                                                                                 <  5:375622/101‑1 (MQ=255)
                                                                                                            tCAAGGTGGCGGCCACCCTCCAGGTACACGCCACccttgatttcctggccctggacaagaccggcaccatcacccatggcaagcctgtgcagaccgacgccaaggt                                                                            >  3:260232‑M2/1‑34 (MQ=255)
                                                                                                            tCAAGGTGGCGGCCACCCTCCAGGTACACGCCACccttgatttcctggccctggacaagaccggcaccatcacccatggcaagcctgtgcagaccgacgccaaggt                                                                            <  4:260232‑M2/106‑73 (MQ=255)
                                                                                                              aaGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTaaa                              <  4:199037/149‑1 (MQ=255)
                                                                                                                     cggcCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGc                                                           >  5:58356/1‑113 (MQ=255)
                                                                                                                     cggcCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGc                                                           <  6:58356/113‑1 (MQ=255)
                                                                                                                      ggcCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTc                       >  5:63307/1‑148 (MQ=255)
                                                                                                                      ggcCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTc                       >  5:221185/1‑148 (MQ=255)
                                                                                                                              tCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGgc              >  5:108360/1‑149 (MQ=255)
                                                                                                                                cAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGgcgc            >  3:290193/1‑149 (MQ=255)
                                                                                                                                 aGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGgcgc            >  1:129848/1‑148 (MQ=255)
                                                                                                                                  ggTACACGCGACCCTTGATCAGGATGCCTTTGCGCGCGGCGGAGGCCAGTCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCTGTAAACCCAGTGGAACCAGGCgcca          <  6:63307/149‑1 (MQ=255)
                                                                                                                                       acGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGGCGccagccag     <  2:182226/149‑1 (MQ=255)
                                                                                                                                       acGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGGCGccagccag     >  1:182226/1‑149 (MQ=255)
                                                                                                                                        cGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGGCGccagccag     >  3:146080/1‑148 (MQ=255)
                                                                                                                                        cGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGGCGCCAGCCAgg    <  3:146966/149‑1 (MQ=255)
                                                                                                                                        cGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGGCGCCAGCCAgg    <  5:68288/149‑1 (MQ=255)
                                                                                                                                         gCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAgg               >  6:118250/1‑137 (MQ=255)
                                                                                                                                         gCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAgg               <  5:118250/137‑1 (MQ=255)
                                                                                                                                         gCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGGCGCCAGCCAgg    >  2:139938/1‑148 (MQ=255)
                                                                                                                                         gCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGGCGCCAGCCAGGaa  >  3:145502/1‑149 (MQ=255)
                                                                                                                                              |                                                                                                                                                  
GCCGCCAAGGCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGGCGCCAGCCAGGAA  >  NC_002947/5864718‑5865004

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.