New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 89378365 (1.100)4 (0.070) 4/252 NT 5.7% coding (266/303 nt) PP_0775 hypothetical protein
?NC_002947 = 893871 71 (1.250)coding (178/303 nt) PP_0775 hypothetical protein

CAAGGTGCGCACCAGGCCCAGGCTGATCGAAGTCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTGGCCTTCTTCGTCC  >  NC_002947/893637‑893929
                                                                                                                                                  |                                                                                                                                                  
cAAGGTGCGCACCAGGCCCAGGCTGATCGAAGTCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCAc                                                                                                                                                  <  2:158716/149‑1 (MQ=255)
  aGGTGCGCACCAGGCCCAGGCTGATCGAAGTCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCAc                                                                                                                                                  >  1:212125/1‑147 (MQ=255)
  aGGTGCGCACCAGGCCCAGGCTGATCGAAGTCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCa                                                                                                                                                <  4:343419/149‑1 (MQ=255)
         caacaggctcaggcGGAGAGTAGTTAGGCCGACAGGTATTTCTGTGGGCGCTATGAAAACTGGCTGCATGCTTGCTTCTCGTTATCCGCGGTGCTAGTAATTATCGGTAAAGTGTAGCGGTATCGGCCCATTGTGCGCACCAGCCGCaa                                                                                                                                         <  8:83734/146‑1 (MQ=255)
          aCCAGGCCCAGGCTGATCGAAGTCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAg                                                                                                                                        >  3:287453/1‑149 (MQ=255)
            caggcccaggcTGATCGAAGTCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGc                                                                                                                                       >  3:174974/1‑148 (MQ=255)
                  caggcTGATCGAAGTCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGc                                                                                                                                >  8:76876/1‑149 (MQ=255)
                      cTGATCGAAGTCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGc                                                                                                                            <  4:230912/149‑1 (MQ=255)
                           cGAAGTCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGAtg                                                                                                                       >  4:273850/1‑149 (MQ=255)
                           cGAAGTCAGGCAGACACCAAAGTCGGTCGGCGCAATGAAAAATGTATGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGAt                                                                                                                        <  4:5300/148‑1 (MQ=255)
                                tCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTg                                                                                                                  >  2:244775/1‑149 (MQ=255)
                                tCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTg                                                                                                                  >  4:155133/1‑149 (MQ=255)
                                   ggCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTgcg                                                                                                                >  2:211208/1‑148 (MQ=255)
                                      cGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCcaccagccgccgtggcaggcacgcccctgggtgctcgacc                                                                                                            >  5:146741‑M1/1‑109 (MQ=255)
                                          acCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTtgt                                                                                                        <  8:326883/149‑1 (MQ=255)
                                           ccAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTtgtg                                                                                                       <  5:266789/149‑1 (MQ=255)
                                            cAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCcaccagccgccgtggcaggcacgcccctgggtgctcgacccggca                                                                                                       >  4:9072‑M1/1‑103 (MQ=255)
                                            cAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGc                                                                                                      >  4:205056/1‑149 (MQ=255)
                                            cAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGc                                                                                                      >  3:92640/1‑149 (MQ=255)
                                            cAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGc                                                                                                      >  1:137325/1‑149 (MQ=255)
                                            cAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGc                                                                                                      >  5:91425/1‑149 (MQ=255)
                                            cAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGc                                                                                                      >  6:176902/1‑149 (MQ=255)
                                                  cggtcggCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTc                                                                                                <  5:128484/149‑1 (MQ=255)
                                                   ggtcggCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTc                                                                                                <  3:234012/148‑1 (MQ=255)
                                                       ggCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGGAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCa                                                                                           <  7:76876/149‑1 (MQ=255)
                                                        gcgcAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCAc                                                                                          <  2:212125/149‑1 (MQ=255)
                                                          gcAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCAcc                                                                                         >  4:165144/1‑148 (MQ=255)
                                                            aaTGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAg                                                                                      <  3:155133/149‑1 (MQ=255)
                                                            aaTGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAg                                                                                      >  2:284546/1‑149 (MQ=255)
                                                            aaTGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGAAAGCGAAAGGCTGGACGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAg                                                                                      >  3:338464/1‑149 (MQ=255)
                                                                aaaaaTGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGc                                                                                  >  1:241767/1‑149 (MQ=255)
                                                                       tCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGtgcctg                                                                           <  7:337205/149‑1 (MQ=255)
                                                                          gCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCAc                                                                                                                                                  >  8:211131/1‑75 (MQ=255)
                                                                          gCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCAc                                                                                                                                                  <  7:211131/75‑1 (MQ=255)
                                                                          gCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCa                                                                        >  5:171006/1‑149 (MQ=255)
                                                                            aTGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCAcg                                                                      >  3:326430/1‑149 (MQ=255)
                                                                              gCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCAcggc                                                                    >  4:278530/1‑149 (MQ=255)
                                                                                   cTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCtg                                                               <  3:273850/149‑1 (MQ=255)
                                                                                   cTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCtg                                                               <  5:176902/149‑1 (MQ=255)
                                                                                   cTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCt                                                                <  5:75847/148‑1 (MQ=255)
                                                                                    ttCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCtgg                                                              <  2:241767/149‑1 (MQ=255)
                                                                                      ctcGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCtggtg                                                            >  4:332360/1‑149 (MQ=255)
                                                                                         gAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGgcg                                                         <  2:230126‑M2/149‑4 (MQ=255)
                                                                                         gAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGgcg                                                         <  8:303007‑M2/149‑4 (MQ=255)
                                                                                         gAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGg                                                           >  2:339815‑M2/1‑146 (MQ=255)
                                                                                          aaaTAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCcaccagccgccgtggcaggcacgcccctgggtgctcgacccggcacaacgtgcgcaacacatcggccagcctttcgcttgcggctggtgcgc                                                        <  6:146741‑M1/149‑93 (MQ=255)
                                                                                           aaTAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCcaccagccgccgtggcaggcacgcccctgggtgctcgacccggcacaacgtgcgcaacacatcggccagcctttcgcttgcggctggtgcgca                                                       <  3:9072‑M1/149‑94 (MQ=255)
                                                                                             tAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAgg                                                     <  4:92640/149‑1 (MQ=255)
                                                                                             tAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAgg                                                     <  1:211208/149‑1 (MQ=255)
                                                                                                 cGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCt                                                 <  2:137325/149‑1 (MQ=255)
                                                                                                   gTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGTGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTgg                                               <  6:25170/149‑1 (MQ=255)
                                                                                                   gTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTgg                                               <  4:287453/149‑1 (MQ=255)
                                                                                                      cAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTa                                            <  4:326430/149‑1 (MQ=255)
                                                                                                        aGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTgg                                               <  6:277927/144‑1 (MQ=255)
                                                                                                        aGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTgg                                               >  5:277927/1‑144 (MQ=255)
                                                                                                         gAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCCGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATgg                                         >  4:310938/1‑149 (MQ=255)
                                                                                                            aTTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCg                                      >  7:194061/1‑149 (MQ=255)
                                                                                                                gCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCAc                                   >  5:183209/1‑148 (MQ=255)
                                                                                                                 cGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACg                                  >  7:161836/1‑148 (MQ=255)
                                                                                                                  ggTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGtg                                                                               <  7:239261/102‑1 (MQ=255)
                                                                                                                  ggTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGtg                                                                               >  8:239261/1‑102 (MQ=255)
                                                                                                                   gTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGaaa                               <  6:171006/149‑1 (MQ=255)
                                                                                                                   gTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGaaa                               <  3:278530/149‑1 (MQ=255)
                                                                                                                       aGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTc                           <  1:230126/149‑1 (MQ=255)
                                                                                                                        gggTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTcc                          <  3:205056/149‑1 (MQ=255)
                                                                                                                             gcgcTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGacac                     >  4:226626/1‑149 (MQ=255)
                                                                                                                                   tCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTg               >  3:179109/1‑149 (MQ=255)
                                                                                                                                   tCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTg               >  4:227853/1‑149 (MQ=255)
                                                                                                                                     ggCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTGGc             <  7:303007/149‑1 (MQ=255)
                                                                                                                                        cccTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAg                              <  1:26295/129‑1 (MQ=255)
                                                                                                                                        cccTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAg                              >  2:26295/1‑129 (MQ=255)
                                                                                                                                        cccTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTGGCctt          <  1:310115/149‑1 (MQ=255)
                                                                                                                                        cccTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTGGCctt          >  2:310115/1‑149 (MQ=255)
                                                                                                                                         ccTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTGGCcttc         >  1:226433/1‑149 (MQ=255)
                                                                                                                                         ccTTCTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTGGCcttc         >  2:295444/1‑149 (MQ=255)
                                                                                                                                           ttGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGACGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGGACGAAAGTTCCGCCACCCAGTGGCcttctt       >  3:180569/1‑149 (MQ=255)
                                                                                                                                           ttGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGGTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGGATGGCCGCACGAAAGTTCCGCCCCCCAGTGGCcttctt       >  3:180571/1‑149 (MQ=255)
                                                                                                                                              tgCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGgcgcacaaggggccgatagcgctacccttgaccgctaatttcttgcaccgcttatt    <  3:9072‑M2/149‑57 (MQ=255)
                                                                                                                                              tgCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGCCGCACGAAAGTTCCGCCACCCAGTGGCCTTCTTCGTc   >  6:324882/1‑149 (MQ=255)
                                                                                                                                               gcgcACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGgcgcacaaggggccgatagcgctacccttgaccgctaatttcttgcaccgcttattt   <  6:146741‑M2/149‑58 (MQ=255)
                                                                                                                                                cgccaccagccgccgtggcaggcacgcccctgggtgctcgacccggcacaacgtgcgcaacacatcggccagcctttcgcttgcggctggtgcgcacaaggggccgatagcgctacccttgaccgctaatttcttgcaccgcttatttc  <  2:230126‑M1/149‑147 (MQ=255)
                                                                                                                                                cgccaccagccgccgtggcaggcacgcccctgggtgctcgacccggcacaacgtgcgcaacacatcggccagcctttcgcttgcggctggtgcgcacaaggggccgatagcgctacccttgaccgctaatttcttgcaccgcttatttc  <  8:303007‑M1/149‑147 (MQ=255)
                                                                                                                                                cgcACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTGGCCTTCTTCGTcc  <  2:98714/149‑1 (MQ=255)
                                                                                                                                                  ccaccagccgccgtggcaggcacgcccctgggtgctcgacccggcacaacgtgcgcaacacatcggccagcctttcgcttgcggctggtgcgcacaaggggccgatagcgctacccttgaccgctaatttcttgcaccgcttatttc  >  2:339815‑M1/1‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
CAAGGTGCGCACCAGGCCCAGGCTGATCGAAGTCAGGCCGACACCAAAGTCGGTCGGCGCAATGAAAAATGTCTGCATGCGTGCTTCTCGAAATAAGCGGTGCAAGAAATTAGCGGTCAAGGGTAGCGCTATCGGCCCCTTGTGCGCACCAGCCGCAAGCGAAAGGCTGGCCGATGTGTTGCGCACGTTGTGCCGGGTCGAGCACCCAGGGGCGTGCCTGCCACGGCGGCTGGTGGCGCAGGTGCTGGGTATGGCCGCACGAAAGTTCCGCCACCCAGTGGCCTTCTTCGTCC  >  NC_002947/893637‑893929

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.