New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1816461 =	42 (0.710)	3 (0.050)	3/248	NT	6.8%	coding (333/750 nt)	surE	5'‑nucleotidase SurE
	?	NC_002947	1816538 =	42 (0.750)					coding (410/750 nt)	surE	5'‑nucleotidase SurE

CTCAACGGCACGCCGACCGACTGCGTGCACCTGGGGCTCAATGGGCTGTTGC‑CGCAGATGCCGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTGCCGACTGCGGCCTATATCGCCCGTCGTCTGGTCGAAGCACAGTCGCGTCTGGTGTTGCCGCCACGCACCGTACTCAACGTCAA  >  NC_002947/1816315‑1816607                                                                                                                                                    |                                                                                                                                                   gcgccgccgcccgcgcccggtgaccgagacgggtgagctggatgccacggatgtgctccagcggcaagttgggaatattgacgttgagtacggtgcgtggcggcaacaccagacgcgactgtgcttcgaccagacgacgggcgatatAg                                                                                                                                                   >  5:65855‑M1/148‑149 (MQ=255)  tCAACGGCACGCCGACCGACTGCGTGCACCTGGGGCTCAATGGGCTGTTGC‑CGCAGATGCCGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGc                                                                                                                                                 >  8:107144/1‑149 (MQ=255)  tCAACGGCACGCCGACCGACTGCGTGCACCTGGGGCTCAATGGGCTGTTGC‑CGCAGATGCCGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGc                                                                                                                                                 >  6:54029/1‑149 (MQ=255)  tCAACGGCACGCCGACCGACTGCGTGCACCTGGGGCTCAATGGGCTCTTGC‑CGCAGATGCCGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGc                                                                                                                                                 >  8:36610/1‑149 (MQ=255)    aaCGGCACGCCGACCGACTGCGTGCACCTGGGGCTCAATGGGCTGTTGC‑CGCAGATGCCGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGc                                                                                                                                                 <  5:137746/147‑1 (MQ=255)    aaCGGCACGCCGACCGACTGCGTGCACCTGGGGCTCAATGGGCTGTTGC‑CGCAGATGCCGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCg                                                                                                                                               >  7:85165/1‑149 (MQ=255)         cACGCCGACCGACTGCGTGCACCTGGGGCTCAATGGGCTGTTGC‑CGCAGATGCCGGACATGGTCGTGTCGGGGATCAACCTCCGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTcc                                                                                                                                          <  3:31342/149‑1 (MQ=255)                   gacTGCGTGCACCTGGGGCTCAATGGGCTGTTGCTCGCAGATGCCGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGAGCTGGAAGGCCGCTTCCTCTGCGGTa                                                                                                                                 >  1:236487/1‑149 (MQ=255)                             aCCTGGGGCTCAATGGGCTGTTGC‑CGCAGATGCCGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCg                                                                                                                      >  6:29606/1‑149 (MQ=255)                               cTGGGGCTCAATGGGCTGTTGC‑CGCAGATGCCGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGtt                                                                                                                    >  4:37023/1‑149 (MQ=255)                                   ggCTCAATGGGCTGTTGC‑CGCAGATGCCGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCg                                                                                                                >  4:337637/1‑149 (MQ=255)                                      ctggatgccacggatgtgctccagcggcaagttgggaatattgacgttgagtacggtgcgtggcggcaacaccagacgcgactgtgcttcgaccagacgacgggcgatatAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCt                                                                                                              <  3:326580‑M1/39‑1 (MQ=255)                                        aaTGGGCTGTTGC‑CGCAGATGCCGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCtgtt                                                                                                           <  5:54029/149‑1 (MQ=255)                                        aaTGGGCTGTTGC‑CGCAGATGCCGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCtg                                                                                                             <  7:252265/147‑1 (MQ=255)                                        aaTCGGCTGTTGC‑CGCAGATGCCGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCtgtt                                                                                                           >  4:167529/1‑149 (MQ=255)                                             gCTGTTGC‑CGCAGATGCCGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTcgc                                                                                                      >  5:257493/1‑149 (MQ=255)                                             gCTGTTGC‑CGCAGATGCCGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTcgc                                                                                                      <  4:86068/149‑1 (MQ=255)                                                   gC‑CGCAGATGCCGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTcg                                                                                                       <  7:191965/142‑1 (MQ=255)                                                   gC‑CGCAGATGCCGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTcg                                                                                                       >  8:191965/1‑142 (MQ=255)                                                    c‑cGCAGATTCCGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGAAGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCTGAACCTCGCTGGCGTGCGCGCtgtt                                                                                                           >  8:267931/1‑137 (MQ=255)                                                    c‑cGCAGATGCCGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGc                                                                                                                           >  2:338138/1‑121 (MQ=255)                                                    c‑cGCAGATGCCGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCtgtt                                                                                                           <  7:267931/137‑1 (MQ=255)                                                    c‑cGCAGATGCCGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGcc                                                                                               >  8:223605/1‑149 (MQ=255)                                                      cGCAGATGCCGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCg                                                                                              <  7:223605/149‑1 (MQ=255)                                                      cGCAGAGGCCGGACATGCTCGTGGCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCg                                                                                              <  6:257493/149‑1 (MQ=255)                                                          gATGCCGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGAc                                                                                           >  2:64063/1‑148 (MQ=255)                                                           aTGCCGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACaa                                                                                         >  6:174879/1‑149 (MQ=255)                                                               cGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTg                                                                                     <  1:64063/149‑1 (MQ=255)                                                               cGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTg                                                                                     >  2:74415/1‑149 (MQ=255)                                                                 gACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTGcc                                                                                   <  7:303840/149‑1 (MQ=255)                                                                       gTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTGCCGACTGc                                                                             >  6:241530/1‑149 (MQ=255)                                                                            tattgacgttgagtacggtgcgtggcggcaacaccagacgcgactgtgcttcgaccagacgacgggcgatatAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTGCCGACTGCGGCCt                                                                        >  1:218944‑M1/73‑149 (MQ=255)                                                                             tCGGGGATCAACCTCGGTGCCAACCTGGGCGATGTCGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTGCCGACTGCGGCCt                                                                        <  8:192521/148‑1 (MQ=255)                                                                             tCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTGcc                                                                                   >  5:18502/1‑137 (MQ=255)                                                                             tCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTGcc                                                                                   <  6:18502/137‑1 (MQ=255)                                                                               ggggATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTGCCGACTGCGGCCtat                                                                      <  3:37023/148‑1 (MQ=255)                                                                               ggggATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTAATCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTGCCGACTGCGGCCtata                                                                     <  3:167529/149‑1 (MQ=255)                                                                                gacgttgagtacggtgcgtggcggcaacaccagacgcgactgtgcttcgaccagacgacgggcgatatAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTGCCGACTGCGGCCtata                                                                     >  4:326580‑M1/69‑148 (MQ=255)                                                                                            ggTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTGCCGACTGCGGCCTATATCGCCcgtcgt                                                          <  1:74415/147‑1 (MQ=255)                                                                                            ggTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTGCCGACTGCGGCCTATATCGCCCgtcgtc                                                         <  3:337637/148‑1 (MQ=255)                                                                                             gTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTGCCGACTGCGGCCTATATCGCCCGTCGTCTg                                                       <  5:29606/149‑1 (MQ=255)                                                                                                   aCCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTGCCGACTGCGGCCTATATCGCCCGTCGTCTGGTCg                                                   >  8:169490/1‑147 (MQ=255)                                                                                                   aCCTGGGAGATGACGTGCTGTATTCGGGAACGGTCGCTTCGGCTCTGGAAGGCCTCTTCCTCGGCGGTCCCTCACTGGCGTTCTCGCTGTTGTCGCTCATGCCGGACAACCTGCCGACTGCGGCCTATATCGCCCGTCGTCTGGTCGaa                                                 <  2:236487/149‑1 (MQ=255)                                                                                                     cTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTGCCGACTGCGGCCTATATCGCCCGTCGTCTGGTCGAAGc                                               <  3:314176/149‑1 (MQ=255)                                                                                                             tGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTGCCGACTGCGGCCTATATCGCCCGTCGTCTGGTCGAAGCACAGTcgc                                       >  4:209431/1‑149 (MQ=255)                                                                                                              gACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTGCCGACTGCGGCCTATATCGCCCGTCGTCTGGTCGAAGCACAGTcgcg                                      >  4:321579/1‑149 (MQ=255)                                                                                                                       tATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTGCCGACTGCGGCCTATATCGCCCGTCGTCTGGTCGAAGCACAGTCGCGTCTGGTGtt                             <  7:107144/149‑1 (MQ=255)                                                                                                                         ttCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCGGGACAACCTGCCGACTGCGGCCTATATCGCCCGTCGTCTGGTCGAAGCACAGTCGCGTCTGGTGTTgc                           >  8:330714/1‑149 (MQ=255)                                                                                                                            gggAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTGCCGACTGCGGCCTATATCGCCCGTCGTCTGGTCGAAGCACAGTCGCGTCTGGTGTTgccgc                        >  1:80961/1‑149 (MQ=255)                                                                                                                                   gTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTGCCGACTGCGGCCTATATCGCCCGTCGTCTGGTCGAAGCACAGTCGCGTCTGGTGTTGCCGCCACGCAc                 <  2:80961/149‑1 (MQ=255)                                                                                                                                                tGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTGCCGACTGCGGCCTATATCGCCCGTCGTCTGGTCGAAGCACAGTCGCGTCTGGTGTTGCCGCCACGCACCGTACTCAAcct     >  1:254110/1‑146 (MQ=255)                                                                                                                                                 ggAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTGCCGACTGCGGCCTATATCGCCCGTCGTCTGGTCGAAGCACAGTCGCGTCTGGTGTTGCCGCCACGCACCGTACTCAACGTc    >  6:252848/1‑148 (MQ=255)                                                                                                                                                  gAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTGCCGACTGCGGCCTATATCGCCCGTCGTCTGGTCGAAGCACAGTcgc                                       >  4:167932/1‑112 (MQ=255)                                                                                                                                                  gAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTGCCGACTGCGGCCTATATCGCCCGTCGTCTGGTCGAAGCACAGTcgc                                       <  3:167932/112‑1 (MQ=255)                                                                                                                                                  gAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTGCCGACTGCGGCCTATATCGCCCGTCGTCTGGTCGAAGCACAGTCGCGTCTGGTGTTGCCGCCACGCACCGTACTCAACGTCaa  >  5:161675/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                   CTCAACGGCACGCCGACCGACTGCGTGCACCTGGGGCTCAATGGGCTGTTGC‑CGCAGATGCCGGACATGGTCGTGTCGGGGATCAACCTCGGTGCCAACCTGGGCGATGACGTGCTGTATTCGGGAACGGTCGCTGCGGCGCTGGAAGGCCGCTTCCTCGGCGGTACCTCGCTGGCGTTCTCGCTGTTGTCGCGCCAGCCGGACAACCTGCCGACTGCGGCCTATATCGCCCGTCGTCTGGTCGAAGCACAGTCGCGTCTGGTGTTGCCGCCACGCACCGTACTCAACGTCAA  >  NC_002947/1816315‑1816607

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.