New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 2069969NA (NA)4 (0.070) 4/248 NT NA coding (343/1422 nt) PP_1846 group II intron‑encoding maturase
?NC_002947 = 2070049 NA (NA)coding (423/1422 nt) PP_1846 group II intron‑encoding maturase

CCATCCCCAAGCAGTGCGAGCGGTTGAAATTCCCAAGCCGCAGGGCGGCACACGGCAACTGGGTATCCCCAGCGTCGTGGATCGCCTGATCCAGCAAGCACTGCAGCAGCAGCTCACACCTATCTTCGACCCACTGTTCTCGGACTACA  >  NC_002947/2069953‑2070101
                |                                                                                                                                    
ccctCCCCAAGCAGTGCGAGCGGTTGAAATTCCCCAGCCGCAGGGCGGCACACGGCAACTGGGTATCCCCAGCGTCGTGGATCGCCTGATCCAGCAAGCACTGCAGCAGCAGCTCACACCTATCTTCGACCCACTGTTCTCGGACTACa  <  6:344139/146‑1 (MQ=1)
                |                                                                                                                                    
CCATCCCCAAGCAGTGCGAGCGGTTGAAATTCCCAAGCCGCAGGGCGGCACACGGCAACTGGGTATCCCCAGCGTCGTGGATCGCCTGATCCAGCAAGCACTGCAGCAGCAGCTCACACCTATCTTCGACCCACTGTTCTCGGACTACA  >  NC_002947/2069953‑2070101

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.