New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3293055 = | 50 (0.850) | 3 (0.050) | 3/248 | NT | 5.8% | coding (2339/3675 nt) | PP_2893 | hypothetical protein |
? | NC_002947 | 3293094 = | 50 (0.900) | coding (2378/3675 nt) | PP_2893 | hypothetical protein |
CTCAATGCCGACATCAACCTGGACATCCCGGCCAGCGGCCCCAAGGGCACTGTCGTGGTCGATGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCC > NC_002947/3292907‑3293201 | cTCAATGCCGACATCAACCTGGACATCCCGGCCAGCGGCCCCAAGGGCACTGTCGTGGTCGATGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCCCGTTGGc > 8:43581/1‑149 (MQ=255) aTGCCGACATCAACCTGGACATCCCGGCCAGCGGCCCCAAGGGCACTGTCGTGGTCGATGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACcg > 1:84074/1‑149 (MQ=255) gaggtgcccggccaggcgttcgtccatgggcacgtatgggcgggcgaccgacaggtccagcccggccaggcggaaatcacccgacaacggtttgttcttgcccagcggatcgagccgggcgttgacgttcagctcacccaggcgctCa > 5:183676‑M1/147‑148 (MQ=255) tccGACATCAACATGGACATCACGGACATCGGCCCCAAGCGCACTGACGTGGTCAATGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGAGACAAAGCAAGCTGGATCGATTTCCCTTATCAGACCATGCGCATTGACATCACGTTGGCACctcg > 8:206364/2‑149 (MQ=255) agctgcccggccaggcgttcgaccatgggcacgaatgggcgggccaccgacaggtccagcccggccaggcggaaatcacccgacaacggtttgttcttgcccagcggatcgagccgggcgttgacgttcagctcacccaggcgctCAcc < 5:208744‑M1/4‑1 (MQ=255) gcccggccaggcgttcgaccatgggcacgaatgggcgggccaccgacaggtccagcccggtcaggcggaaatcacccgacaacggtttgttcttgcccagcggatcgagccgggcgttgacgttcagctcacccaggcgctCACcgcg < 4:265783‑M1/7‑1 (MQ=255) aTCAACCTGGACATCCCGGCCAGCGGCCCCAAGGGCACTGTCGTTGTCGATGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTAt < 4:60868/149‑1 (MQ=255) ccTGGACATCCCGGCCAGCGGCCCCAAGGGCACTGTCGTGGTCGATGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATa > 4:132771/1‑149 (MQ=255) cTGGACATCCCGGCCAGCGGCCCCAAGGTCACTGTCGTGGTCGCTCCCCCGAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGa < 1:307926/149‑1 (MQ=255) ggACATCCCGGCCAGCGGCCCCAAGGGCACTGTCGTGGTCGATGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATAcgc > 5:286317/1‑149 (MQ=255) gACATCCCGGCCAGCGGCCCCAAGGGCACTGTCGTGGTCGATGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATAcgcg > 1:72549/1‑149 (MQ=255) aTCCCGGCCAGCGGCCCCAAGGGCACTGTCGTGGTCGATGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCt > 4:167430/1‑149 (MQ=255) tCCCGGCCAGCGGCCCCAAGGGCACTGTCGTGGTCGATGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTg > 5:300896/1‑149 (MQ=255) cGGCCAGCGGCCCCAAGGGCACTGTCGTGGTCGATGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCg > 8:312397/1‑149 (MQ=255) cAGCGGCCCCAAGGGCACTGTCGTGGTCGATGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTc < 4:6381/149‑1 (MQ=255) cAGCGGCCCCAAGGGCACTGTCGTGGTCGATGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTc < 7:312397/149‑1 (MQ=255) cGGCCCCAAGGGCACTGTCGTGGTCGATGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTcgcg < 7:206364/149‑1 (MQ=255) ccccAAGGGCTCTGTCGTGGTCGATGCC‑‑‑AGTGGCGGCAGCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTGCCTTTTCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTg < 3:192803/149‑1 (MQ=255) tgggcgggccaccgacaggtccagcccggccaggcggaaatcacccgacaacggtttgttcttgcccagcggatcgagccgggcgttgacgttcagctcacccaggcgctCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTg > 5:287716‑M1/111‑149 (MQ=255) aaGGGCACTGTCGTGGTCGATGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAgcg > 2:133302/1‑149 (MQ=255) cACTGTCGTGGTCGATGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTgg > 5:173695/1‑149 (MQ=255) aCTGTCGTGGTCGATGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTggg < 3:132771/149‑1 (MQ=255) aCTGTCGTGGTCGATGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTggg < 7:206510/149‑1 (MQ=255) cTGTCGTGGTCGATGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAAATGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGAGCCTGGGt < 6:116735/149‑1 (MQ=255) cTGTCGTGGTCGATGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGt < 6:128207/149‑1 (MQ=255) cTGTCGTGGTCGATGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGt < 3:8171/149‑1 (MQ=255) tCGTGGTCGATGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAg > 7:208179/1‑149 (MQ=255) ggTCGATGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAACGGCCGCTGGATCGATGTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATAGATACGCGCCTGGCGTTTCGCGGTGCGCGCCTGGGGGCGCTg > 6:213092/1‑148 (MQ=255) tCGATGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAAc > 7:36090/1‑149 (MQ=255) aTGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTc < 2:128907/149‑1 (MQ=255) tGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTc > 5:152299/1‑148 (MQ=255) cc‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAAc < 8:304038/149‑1 (MQ=255) gTGGCGGCACCCTGCGCGTGCGCTACAAAGGCCTCTGGATCGATTTCCGTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGGTTCGCGGTGATCGCCTGGGTGAGCTGAACGTCAACGcc < 5:213092/149‑1 (MQ=255) caggcggaaatcacccgacaacggtttgttcttgcccagcggatcgagccgggcgttgacgttcagctcacccaggcgctCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGt > 3:206892‑M1/81‑118 (MQ=255) caggcggaaatcacccgacaacggtttgttcttgcccagcggatcgagccgggcgttgacgttcagctcacccaggcgctCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGt < 4:206892‑M1/38‑1 (MQ=255) ccTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATc > 2:13084/1‑149 (MQ=255) cgcgtgcgcgACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCt < 2:72549/149‑1 (MQ=255) gcgtgcgcgACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTg < 2:84074/149‑1 (MQ=255) gcgtgcgcgACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTg < 4:135871/149‑1 (MQ=255) cgtgcgcgACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTgg < 7:273558/149‑1 (MQ=255) cgcgACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCaa < 8:36090/149‑1 (MQ=255) aaaGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACa > 1:98288/1‑148 (MQ=255) ggCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAAcc < 6:152299/149‑1 (MQ=255) tCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACTAACCGTTGTCGGGt < 7:43581/149‑1 (MQ=255) cccTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTgg < 2:202837/83‑1 (MQ=255) cccTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTgg > 1:202837/1‑83 (MQ=255) cccTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGAtt > 5:376236/1‑146 (MQ=255) cccTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGAtt < 6:376236/146‑1 (MQ=255) aTCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAAc < 3:182828/126‑1 (MQ=255) aTCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAAc > 4:182828/1‑126 (MQ=255) aTCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCt < 2:98288/148‑1 (MQ=255) ggCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCg > 5:3372/1‑149 (MQ=255) ggCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCg > 3:83411/1‑149 (MQ=255) cgcCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGa < 1:13084/149‑1 (MQ=255) gcCTGGACAGCACGTTGGCACCGCGGCTTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGTGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGAc < 6:300896/149‑1 (MQ=255) ccTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTg < 2:245052/100‑1 (MQ=255) ccTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTg > 1:245052/1‑100 (MQ=255) gCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTg < 1:133302/149‑1 (MQ=255) gCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGgcccgcc < 6:173695/148‑1 (MQ=255) | CTCAATGCCGACATCAACCTGGACATCCCGGCCAGCGGCCCCAAGGGCACTGTCGTGGTCGATGCC‑‑‑AGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCCGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCC > NC_002947/3292907‑3293201 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |