New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3293055 = | 50 (0.850) | 3 (0.050) | 3/248 | NT | 5.8% | coding (2339/3675 nt) | PP_2893 | hypothetical protein |
? | NC_002947 | 3293094 = | 50 (0.900) | coding (2378/3675 nt) | PP_2893 | hypothetical protein |
AAGGGCACTGTCGTGGTCGATGCCAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTC > NC_002947/3292949‑3293239 | aaGGGCACTGTCGTGGTCGATGCCAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAgcg > 2:133302/1‑149 (MQ=255) cACTGTCGTGGTCGATGCCAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTgg > 5:173695/1‑149 (MQ=255) aCTGTCGTGGTCGATGCCAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTggg < 7:206510/149‑1 (MQ=255) aCTGTCGTGGTCGATGCCAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTggg < 3:132771/149‑1 (MQ=255) cTGTCGTGGTCGATGCCAGTGGCGGCACCCTGCGCGTGCGCGACAAATGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGAGCCTGGGt < 6:116735/149‑1 (MQ=255) cTGTCGTGGTCGATGCCAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGt < 6:128207/149‑1 (MQ=255) cTGTCGTGGTCGATGCCAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGt < 3:8171/149‑1 (MQ=255) tCGTGGTCGATGCCAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAg > 7:208179/1‑149 (MQ=255) ggTCGATGCCAGTGGCGGCACCCTGCGCGTGCGCGACAACGGCCGCTGGATCGATGTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATAGATACGCGCCTGGCGTTTCGCGGTGCGCGCCTGGGGGCGCTg > 6:213092/1‑148 (MQ=255) tCGATGCCAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAAc > 7:36090/1‑149 (MQ=255) aTGCCAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTc < 2:128907/149‑1 (MQ=255) tGCCAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTc > 5:152299/1‑148 (MQ=255) ccAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAAc < 8:304038/149‑1 (MQ=255) gTGGCGGCACCCTGCGCGTGCGCTACAAAGGCCTCTGGATCGATTTCCGTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGGTTCGCGGTGATCGCCTGGGTGAGCTGAACGTCAACGcc < 5:213092/149‑1 (MQ=255) ccTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATc > 2:13084/1‑149 (MQ=255) cgcgtgcgcgACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCt < 2:72549/149‑1 (MQ=255) gcgtgcgcgACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTg < 2:84074/149‑1 (MQ=255) gcgtgcgcgACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTg < 4:135871/149‑1 (MQ=255) cgtgcgcgACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTgg < 7:273558/149‑1 (MQ=255) cgcgACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCaa < 8:36090/149‑1 (MQ=255) aaaGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACa > 1:98288/1‑148 (MQ=255) ggCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAAcc < 6:152299/149‑1 (MQ=255) tCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACTAACCGTTGTCGGGt < 7:43581/149‑1 (MQ=255) cccTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTgg < 2:202837/83‑1 (MQ=255) cccTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTgg > 1:202837/1‑83 (MQ=255) cccTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGAtt < 6:376236/146‑1 (MQ=255) cccTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGAtt > 5:376236/1‑146 (MQ=255) aTCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAAc < 3:182828/126‑1 (MQ=255) aTCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAAc > 4:182828/1‑126 (MQ=255) aTCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCt < 2:98288/148‑1 (MQ=255) ggCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCg > 3:83411/1‑149 (MQ=255) ggCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCg > 5:3372/1‑149 (MQ=255) cgcCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGa < 1:13084/149‑1 (MQ=255) gcCTGGACAGCACGTTGGCACCGCGGCTTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGTGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGAc < 6:300896/149‑1 (MQ=255) ccTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTg < 2:245052/100‑1 (MQ=255) ccTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTg > 1:245052/1‑100 (MQ=255) gCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTg < 1:133302/149‑1 (MQ=255) gCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGgcccgcc < 6:173695/148‑1 (MQ=255) caccgcgaaacgccaggcgcgtatcgatacgccgcggtgAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCa > 5:287716‑M2/40‑149 (MQ=255) accgcgaaacgccaggcgcgtatcgatacgccgcggtgAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTg > 3:206892‑M2/39‑118 (MQ=255) accgcgaaacgccaggcgcgtatcgatacgccgcggtgAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTg < 4:206892‑M2/80‑1 (MQ=255) CCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGACCGGGCTGGACCTGTCGGTGGCCCGCCCAtt < 3:265783‑M1/149‑1 (MQ=255) gcgTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGc > 8:13703/1‑149 (MQ=255) gTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGtt > 5:255160/1‑91 (MQ=255) gTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGtt < 6:255160/91‑1 (MQ=255) aTCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCAt > 4:238348/1‑149 (MQ=255) gATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGGGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATgg < 1:26093/148‑1 (MQ=255) aTACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGACCAAACCGTTGTCGGGGGATGTCCGCCTGGCCGGGCTGGACCTGGCGGTGGCCCGCCCATTCGTGCCCAGGGTc > 7:168461/1‑149 (MQ=255) aTACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTc > 3:149596/1‑149 (MQ=255) tACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTc > 6:208744/1‑148 (MQ=255) gcgcCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATCGCGCTGGGCAAGAAAAAACCGTTGTCCGGTGATTTACCCCTGGCCGGGCTTGACCAGTCGGTTGCCCCCCCAATCGTGCCCAAGGTCCaa > 1:106467/1‑149 (MQ=255) gcgcCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAAc > 8:95235/1‑149 (MQ=255) gcCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGc < 7:13703/149‑1 (MQ=255) cTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCt > 7:33641/1‑149 (MQ=255) gCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTg < 4:149596/147‑1 (MQ=255) tttCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCgg < 3:238348/149‑1 (MQ=255) cgcggtgAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGACCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGc < 4:265783‑M2/141‑1 (MQ=255) ggtgAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCt < 5:208744‑M2/145‑1 (MQ=255) tgAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTCGCCCGCCCATACGTGCCCATGGACGAACGCCTGGCCGGGCACCTc > 5:183676‑M2/3‑148 (MQ=255) | AAGGGCACTGTCGTGGTCGATGCCAGTGGCGGCACCCTGCGCGTGCGCGACAAAGGCCGCTGGATCGATTTCCCTTATCAGGCCCTGCGCCTGGACAGCACGTTGGCACCGCGGCGTATCGATACGCGCCTGGCGTTTCGCGGTGAGCGCCTGGGTGAGCTGAACGTCAACGCCCGGCTCGATC‑CGCTGGGCAAGAACAAACCGTTGTCGGGTGATTTCCGCCTGGCCGGGCTGGACCTGTCGGTGGCCCGCCCATTCGTGCCCATGGTCGAACGCCTGGCCGGGCAGCTC > NC_002947/3292949‑3293239 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |