New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3604024 =	57 (0.970)	3 (0.050)	3/252	NT	5.0%	coding (630/900 nt)	PP_3179	LysR family transcriptional regulator
	?	NC_002947	3604065 =	58 (1.020)					coding (589/900 nt)	PP_3179	LysR family transcriptional regulator

AAAACTGCACGCGTTCGCGCGGGGTTGAGCGGACGAAGGACGCCGGCACCAGGGCCACGCCAAAGCCGCAGGCCACCAGACCCAGCAGGGTGTGGATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATGGGATGGCTGGCGGGCAGCGCCATGACGATCTGCTCGTCAAGCAGC  >  NC_002947/3603876‑3604171                                                                                                                                                     |                                                                                                                                                     aaaaCTGCACGCGTTCGCGCGGGGTTGAGCGGACGAAGGACGCCGGCACCAGGGCCACGCCAAAGCCGCAGGCCACCAGACCCAGCAGGGTGTGGATCTGTGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAgc                                                                                                                                                      >  4:179301/1‑149 (MQ=255) aaaaCTGCACGCGTTCGCGCGGGGTTGAGCGGACGAAGGACGCCGGCACCAGGGCCACGCCAAAGCCGCAGGCCACCAGACCCAGCAGGGTGTGGATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAgc                                                                                                                                                      >  5:54143/1‑149 (MQ=255)  aaaCTGCACGCGTTCGCGCGGGGTTGAGCGGACGAAGGACGCCGGCACCAGGGCCACGCCAAAGCCGCAGGCCACCAGACCCAGCAGGGTGTGGATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAgcg                                                                                                                                                     <  3:121572/149‑1 (MQ=255)     ggctaccgctgccggtctgcaccctggaggctcgcttgctgcttgacgagcagatcgtcatggcgctgcccgccagccatcccatggcgcgtttcgaggccgtcgacttgcgcgagtttgccgatgaggacttcgtgttcacccCGcaa                                                                                                                                                  >  6:179014‑M1/145‑149 (MQ=255)        cACGCGTTCGCGCGGGGTTGAGCGGACGAAGGACGCCGGCACCAGGGCCACGCCAAAGCCGCAGGCCACCAGACCCAGCAGGGTGTGGATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGcaacc                                                                                                                                                <  6:164200/148‑1 (MQ=255)                  cgcgGGGTTGAGCGGACGAAGGACGCCGGCACCAGGGCCACGCCAAAGCCGCAGGCCACCAGACCCAGCAGGGTGTGGATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGcaa                                                                                                                                                  >  1:108750/1‑136 (MQ=255)                  cgcgGGGTTGAGCGGACGAAGGACGCCGGCACCAGGGCCACGCCAAAGCCGCAGGCCACCAGACCCAGCAGGGTGTGGATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGcaa                                                                                                                                                  <  2:108750/136‑1 (MQ=255)                   gcgGGGTTGAGCGGACGAAGGACGCCGGCACCAGGGCCACGCCAAAGCCGCAGGCCACCAGACCCAGCAGGGTGTGGATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTgg                                                                                                                                    <  5:83950/149‑1 (MQ=255)                   gcgGGGTTGAGCGGACGAAGGACGCCGGCACCAGGGCCACGCCAAAGCCGCAGGCCACCAGACCCAGCAGGGTGTGGATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTgg                                                                                                                                    <  4:11435/149‑1 (MQ=255)                     ggggTTGAGCGGACGAAGGACGCCGGCACCAGGGCCACGCCAAAGCCGCAGGCCACCAGACCCAGCAGGGTGTGGATCTGCGCCGCCTCGTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTa                                                                                                                                  <  6:54143/149‑1 (MQ=255)                           gAGCGGACGAAGGACGCCGGCACCAGGGCCACGCCAAAGCCGCAGGCCACCAGACCCAGCAGGGTGTGGATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGccccc                                                                                                                            >  4:340627/1‑149 (MQ=255)                           gAGCGGACGAAGGACGCCGGCACCAGGGCCACGCCAAAGCCGCAGGCCACCAGACCCAGCAGGGTGTGGATCTGCGCCGCCTCCTGCACGACCTTGGCGGAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGccccc                                                                                                                            >  4:45344/1‑149 (MQ=255)                               ggACGAAGGACGCCGGCACCAGGGCCACGCCAAAGCCGCAGGCCACCAGACCCAGCAGGGTGTGGATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGcc                                                                                                                         >  7:185903/1‑148 (MQ=255)                                        aCGCCGGCACCAGGGCCACGCCAAAGCCGCAGGCCACCAGACCCAGCAGGGTGTGGATCTGTGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGc                                                                                                               <  3:179301/149‑1 (MQ=255)                                          gctgcttgacgagcagatcgtcatggcgctgcccgccagccatcccatggcgcgtttcgaggccgtcgacttgcgcgagtttgccgatgaggacttcgtgttcacccCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCg                                                                                                              >  2:312441‑M1/108‑148 (MQ=255)                                           ccGGCACCAGGGCCACGCCAAAGCCGCAGGCCACCAGACCCAGCAGGGTGTGGATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCggg                                                                                                            <  5:315445/149‑1 (MQ=255)                                              gCACCAGGGCCACGCCAAAGCCTCAGGCCACCAGACCCAGCAGGGTGTGGATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTTGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑Tg                                                                                                        <  6:368111/149‑1 (MQ=255)                                                aCCAGGGCCACGCCAAAGCCGCAGGCCACCAGACCCAGCAGGGTGTGGATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGaa                                                                                                      >  1:347074/1‑149 (MQ=255)                                                 ccAGGGCCACGCCAAAGCCGCAGGCCACCAGACCCAGCAGGGTGTGGATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGaa                                                                                                      >  2:352280/1‑148 (MQ=255)                                                      gCCACGCCAAAGCCGCAGGCCACCAGACCCAGCAGGGTGTGGATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACg                                                                                                  >  8:215928/1‑147 (MQ=255)                                                       ccACGCCAAAGCCGCAGGCCACCAGACCCAGCAGGGTGTGGATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAg                                                                                               <  8:185903/149‑1 (MQ=255)                                                       ccACGCCAAAGCCGCAGGCCACCAGACCCAGCAGGGTGTGGATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAg                                                                                               >  2:226807/1‑149 (MQ=255)                                                         aCGCCAAAGCCGCAGGCCACCAGACCCAGCAGGGTGTGGATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGaa                                                                                                <  6:338580/146‑1 (MQ=255)                                                         aCGCCAAAGCCGCAGGCCACCAGACCCAGCAGGGTGTGGATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGaa                                                                                                >  5:338580/1‑146 (MQ=255)                                                         aCGCCAAAGCCGCAGGCCACCAGACCCAGCAGGGTGTGGATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTc                                                                                             <  2:347074/149‑1 (MQ=255)                                                             cAAAGCCGCAGGCCACCAGACCCAGCAGGGTGTGGATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCa                                                                                         >  3:266552/1‑149 (MQ=255)                                                             cAAAGCCGCAGGCCACCAGACCCAGCAGGGTGTGGATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCa                                                                                         >  7:121871/1‑149 (MQ=255)                                                                          caccaGACCCAGCAGGGTGTGGATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTcgc                                                                            >  6:243201/1‑149 (MQ=255)                                                                               caCCCAGCAGGGTGTGGATCTGCGCCGCCTCCTGCACGAACTTGGGGTATAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTTGTAGCCCCCGCCCATCGCTTGCGGGGTTTAACACGAAGTCCTCATCGGCAAACTCGCGCaa                                                                        <  1:226807/148‑1 (MQ=255)                                                                                  catcccatggcgcgtttcgaggccgtcgacttgcgcgagtttgccgatgaggacttcgtgttcacccCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCgg                                                                                                             <  7:158561‑M1/42‑1 (MQ=255)                                                                                  catcccatggcgcgtttcgaggccgtcgacttgcgcgagtttgccgatgaggacttcgtgttcacccCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCgg                                                                                                             >  8:158561‑M1/68‑109 (MQ=255)                                                                                    agcagGGTGTGGATCTGCGCCGCCTCCTGCACGACATTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTCCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGAc                                                                  >  6:20969/1‑149 (MQ=255)                                                                                         ggTGTGGATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCt                                                             <  8:121871/149‑1 (MQ=255)                                                                                               gATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGaa                                                                                                >  4:334488/1‑108 (MQ=255)                                                                                               gATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGaa                                                                                                <  3:334488/108‑1 (MQ=255)                                                                                               gATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAAc                                                       >  7:306636/1‑149 (MQ=255)                                                                                                     cgccgcCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGcc                                                  <  1:352280/148‑1 (MQ=255)                                                                                                     cgccgcCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCa                                                 >  8:6611/1‑149 (MQ=255)                                                                                                      gccgccTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCAt                                                >  5:262984/1‑149 (MQ=255)                                                                                                       ccgccTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATg                                               >  4:201632/1‑149 (MQ=255)                                                                                                         gccTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATgg                                              >  5:100886/1‑148 (MQ=255)                                                                                                               tGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATGGGAtggct                                       >  5:169348/1‑149 (MQ=255)                                                                                                                gCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTcgc                                                                            >  4:214785/1‑111 (MQ=255)                                                                                                                gCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTcgc                                                                            <  3:214785/111‑1 (MQ=255)                                                                                                                  aCGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATGGGAtggctggc                                    >  8:155083/1‑149 (MQ=255)                                                                                                                  aCGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATGGGAtggctggc                                    >  1:233084/1‑149 (MQ=255)                                                                                                                       cTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATGGGATGGCTGGCggg                                 >  5:91305/1‑147 (MQ=255)                                                                                                                       cTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATGGGATGGCTGGCggg                                 >  3:206575/1‑147 (MQ=255)                                                                                                                             gTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATGGGATGGCTGGCGGGCAGCGCCa                         >  8:339581/1‑149 (MQ=255)                                                                                                                                gAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATGGGATGGCTGGCGGGCAGCGCCATGa                      >  2:43457/1‑149 (MQ=255)                                                                                                                                gAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATGGGATGGCTGGCGGGCAGCGCCATGa                      <  7:155083/149‑1 (MQ=255)                                                                                                                                   cccGGCCGACTCGCGCAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCCAACTCGCGCAAGGCGACGGCCTCGAAACGCGCCATGGGATGGCTGGCGGGCAGCGCCATGACGa                   >  8:174536/1‑149 (MQ=255)                                                                                                                                     cGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATGGGATGGCTGGCGGGCAGCGCCATGACGATc                 <  1:201792/149‑1 (MQ=255)                                                                                                                                     cGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATGGGATGGCTGGCGGGCAGCGCCATGACGATc                 >  2:201792/1‑149 (MQ=255)                                                                                                                                       gCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATGGGATGGCTGGCGGGCAGCGCCATGACGATCTg               <  7:6611/149‑1 (MQ=255)                                                                                                                                          gACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATGGGATGGCTGGCGGGCAGCGCCATGACGATCTGCTc            <  1:43457/149‑1 (MQ=255)                                                                                                                                          gACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATGGGATGGCTGGCGGGCAGCGCCATGACGATCTGCTc            <  5:243201/149‑1 (MQ=255)                                                                                                                                           aCTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATGGGATGGCTGGCGGGCAGCGCCATGACGATCTGCTCg           <  5:20969/149‑1 (MQ=255)                                                                                                                                           aCTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATGGGATGGCTGGCGGGCAGCGCCATGACAATCTGCTCg           <  2:89942/149‑1 (MQ=255)                                                                                                                                           aCTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATGGGATGGCTGGCGGGCAGCGCCATGACAATCTGCTCg           <  2:89947/149‑1 (MQ=255)                                                                                                                                             tCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCgcgc                                                                          >  8:128473/1‑84 (MQ=255)                                                                                                                                             tCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCgcgc                                                                          <  7:128473/84‑1 (MQ=255)                                                                                                                                             tCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATGGGATGGCTGGCGGGCAGCGCCATGACGATCTGCTCGt          >  2:285986/1‑148 (MQ=255)                                                                                                                                             tCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATGGGATGGCTGGCGGGCAGCGCCATGACGATCTGCTCGt          >  5:96300/1‑148 (MQ=255)                                                                                                                                               gCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATGGGATGGCTGGCGGGCAGCGCCATGACGATCTGCTCGTc         <  2:233084/147‑1 (MQ=255)                                                                                                                                               gCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATGGGATGGCTGGCGGGCAGCGCCATGACGATCTGCTCGTc         >  3:283600/1‑147 (MQ=255)                                                                                                                                                  caGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATGGGATGGCTGGCGGGCAGCGCCATGACGATCTGCTCGTCAagca    <  4:206575/149‑1 (MQ=255)                                                                                                                                                    gcgcTACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATGTGATGGCTGGCGGGCAGCGCCATGACGATCTGCTCGTCAagcagc  <  8:306636/149‑1 (MQ=255)                                                                                                                                                    gcgcAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATGGGATGGCTGGCGGGCAGCGCCATGACGATCTGCTCGTCAagcagc  <  6:100886/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     AAAACTGCACGCGTTCGCGCGGGGTTGAGCGGACGAAGGACGCCGGCACCAGGGCCACGCCAAAGCCGCAGGCCACCAGACCCAGCAGGGTGTGGATCTGCGCCGCCTCCTGCACGACCTTGGGGTAGAACCCGGCCGACTCGCACAGCGCAACCAACTGTGCGTGGTAGCCCCCGCCCAGCGCTTGCGGGG‑TGAACACGAAGTCCTCATCGGCAAACTCGCGCAAGTCGACGGCCTCGAAACGCGCCATGGGATGGCTGGCGGGCAGCGCCATGACGATCTGCTCGTCAAGCAGC  >  NC_002947/3603876‑3604171

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.