New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4589170	39 (0.660)	3 (0.050)	3/250	NT	7.3%	coding (1035/1164 nt)	ivd	isovaleryl‑CoA dehydrogenase
	?	NC_002947	= 4589198	39 (0.690)					coding (1063/1164 nt)	ivd	isovaleryl‑CoA dehydrogenase

ATGCCAGCCGCGCCTACCTGTATGCCGTGGCTCAGGCGTGCGACCGTGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAACTGTTCAACGAAACCCGCTGAACATAAGGGACGGGCGCA  >  NC_002947/4589028‑4589317                                                                                                                                               |                                                                                                                                                    aTGCCAGCCGCGCCTACCTGTATGCCGTGGCTCAGGCGTGCGACCGTGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGc                                                                                                                                               <  2:366568/149‑1 (MQ=255)  tGCCAGCCGCGCCTACCTGTATGCCGTGGCTCAGGCGTGCGACCGTGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGc                                                                                                                                               >  7:69002/1‑148 (MQ=255)     cAGCCGCGCCTACCTGTATGCCGTGGCTCAGGCGTGCGACCGTGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCtata                                                                                                                                           <  7:21923/149‑1 (MQ=255)       gCCGCGCCTACCTGTATGCCGTGGCTCAGGCGTGCGACCGTGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTatat                                                                                                                                          >  4:231124/1‑148 (MQ=255)         cgcgCCTACCTGTATGCCGTGGCTCAGGCGTGCGACCGTGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCaa                                                                                                                                       <  7:326273/149‑1 (MQ=255)          gcgcCTACCTGTATGCCGTGGCTCAGGCGTGCGACCGTGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAAc                                                                                                                                      <  2:118889/149‑1 (MQ=255)                aCCTGTATGCCGTGGCTCAGGCGTGCGCCCGTGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTc                                                                                                                                >  3:190784/1‑149 (MQ=255)                       tGCCGTGGCTCAGGCGTGCGACCGTGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTg                                                                                                                         <  2:182095/149‑1 (MQ=255)                         ccGTGGCTCAGGCGTGCGACCGTGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGg                                                                                                                        >  4:22617‑M2/1‑147 (MQ=255)                          cGTGGCTCAGGCGTGCGACCGTGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAAc                                                                                                                                      >  8:166190/1‑133 (MQ=255)                          cGTGGCTCAGGCGTGCGACCGTGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAAc                                                                                                                                      <  7:166190/133‑1 (MQ=255)                                   ggCGTGCGACCGTGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACCCCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTgc                                                                                                             <  2:272952/149‑1 (MQ=255)                                    gCGTGCGACCGTGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTgcg                                                                                                            >  3:86863/1‑149 (MQ=255)                                    gCGTGCGACCGGGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCcagccgggaattcgttgatatagccgttgccgccaagaatc                                                                                                            <  5:169389‑M1/149‑42 (MQ=255)                                     cGTGCGACCGTGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTgcgc                                                                                                           <  2:172087/149‑1 (MQ=255)                                      gTGCGACCGTGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTgcgc                                                                                                           >  3:176541/1‑148 (MQ=255)                                               tGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCcagccgggaattcgttgatatagccgttgccgccaa                                                                                                                 <  3:142084‑M1/133‑37 (MQ=255)                                               tGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCcagccgggaattcgttgatatagccgttgccgccaa                                                                                                                 >  4:142084‑M1/1‑97 (MQ=255)                                                    aaaCCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTAc                                                                                            <  8:132683/149‑1 (MQ=255)                                                        caccCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGTCTATATCAACGAATTCCCGGCTGGCCGCCTGTTCCGCGACGCCAAGCTGTACGaaa                                                                                        <  7:55110/149‑1 (MQ=255)                                                           ccGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCg                                                                                     <  4:86863/149‑1 (MQ=255)                                                           ccGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCg                                                                                     >  4:218865/1‑149 (MQ=255)                                                             gCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGt                                                                                   <  3:231124/149‑1 (MQ=255)                                                               aaGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGc                                                                                 <  6:146831/149‑1 (MQ=255)                                                               aaGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGc                                                                                 <  8:69002/149‑1 (MQ=255)                                                                  gACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCgg                                                                              >  8:273870/1‑149 (MQ=255)                                                                   aCGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCgg                                                                              >  7:225074/1‑148 (MQ=255)                                                                           ggCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTg                                                                      >  8:78809/1‑148 (MQ=255)                                                                                gATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTg                                                                                  >  7:204185/1‑131 (MQ=255)                                                                                caTCCTCTACCCCGCCGAGCGCGCCACGCAAATCGCCCTGCAGGCGATCCAGATACTTGGCGGCAACGCCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTg                                                                                  <  8:204185/130‑1 (MQ=255)                                                                                        acacCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATg                                                        >  3:118381/1‑149 (MQ=255)                                                                                         cacCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGc                                                       <  7:78809/149‑1 (MQ=255)                                                                                         caacgccgAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGc                                                       <  4:190784/146‑1 (MQ=255)                                                                                                       ccACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGaa                                         <  3:218865/149‑1 (MQ=255)                                                                                                        cACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAAc                                        >  1:229801/1‑149 (MQ=255)                                                                                                        cACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAAc                                        >  2:163056/1‑149 (MQ=255)                                                                                                            cAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAACTGtt                                    <  8:225074/149‑1 (MQ=255)                                                                                                            cAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAACTGtt                                    <  4:118381/149‑1 (MQ=255)                                                                                                                          ggCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAACTGTTCAACGAAACCCGCt                      <  7:273870/149‑1 (MQ=255)                                                                                                                                ccAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAACTGTTCAACGAAACCCGCTGAACa                 >  1:108066/1‑148 (MQ=255)                                                                                                                                ccAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAACTGTTCAACGAAACCCGCTGAACa                 >  6:127261/1‑148 (MQ=255)                                                                                                                                   gATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGgccgccaagaatctggatcgcctccagggccatttgcgtggcacgctcggcggtgtacaggatcacgccggcagcgtccttgcgggtggtttcgccccggtcgcacgc             <  5:169389‑M2/149‑109 (MQ=255)                                                                                                                                   gATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAACTGTTCAACGAAACCCGCTGAACATAAg             >  5:254230/1‑149 (MQ=255)                                                                                                                                      tCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAACTGTTCAACGAAACCCGCTGAACATAAGGGa          >  4:154159/1‑149 (MQ=255)                                                                                                                                        ttGGCGGCAACGGCTATATCAACGAATTCCCGGCTGgccgccaagaatctggatcgcctccagggccatttgcgtggcacgctcggcggtgtacaggatcacgccggcagcgtccttgcgggtggtttcgcca                        <  3:142084‑M2/133‑98 (MQ=255)                                                                                                                                        ttGGCGGCAACGGCTATATCAACGAATTCCCGGCTGgccgccaagaatctggatcgcctccagggccatttgcgtggcacgctcggcggtgtacaggatcacgccggcagcgtccttgcgggtggtttcgcca                        >  4:142084‑M2/1‑36 (MQ=255)                                                                                                                                               ccagccgggaattcgttgatatagccgttgccgccaagaatctggatcgcctccagggccatttgcgtggcacgctcggcggtgtacaggatcacgccggcagcgtccttgcgggtggtttcgccacggtcgcacgcctgagccacgg  >  4:22617‑M1/1‑1 (MQ=255)                                                                                                                                               |                                                                                                                                                    ATGCCAGCCGCGCCTACCTGTATGCCGTGGCTCAGGCGTGCGACCGTGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAACTGTTCAACGAAACCCGCTGAACATAAGGGACGGGCGCA  >  NC_002947/4589028‑4589317

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.