New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4589170	39 (0.660)	3 (0.050)	3/250	NT	7.3%	coding (1035/1164 nt)	ivd	isovaleryl‑CoA dehydrogenase
	?	NC_002947	= 4589198	39 (0.690)					coding (1063/1164 nt)	ivd	isovaleryl‑CoA dehydrogenase

TGCCGTGGCTCAGGCGTGCGACCGTGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAACTGTTCAACGAAACCCGCTGAACATAAGGGACGGGCGCACATGGCTACCTTGCACACCCA  >  NC_002947/4589050‑4589338                                                                                                                                                     |                                                                                                                                             tGCCGTGGCTCAGGCGTGCGACCGTGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTg                                                                                                                                              <  2:182095/149‑1 (MQ=255)   ccGTGGCTCAGGCGTGCGACCGTGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGg                                                                                                                                             >  4:22617‑M2/1‑147 (MQ=255)             ggCGTGCGACCGTGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACCCCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTgc                                                                                                                                  <  2:272952/149‑1 (MQ=255)              gCGTGCGACCGTGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTgcg                                                                                                                                 >  3:86863/1‑149 (MQ=255)               cGTGCGACCGTGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTgcgc                                                                                                                                <  2:172087/149‑1 (MQ=255)                gTGCGACCGTGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTgcgc                                                                                                                                >  3:176541/1‑148 (MQ=255)                              aaaCCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTAc                                                                                                                 <  8:132683/149‑1 (MQ=255)                                  caccCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGTCTATATCAACGAATTCCCGGCTGGCCGCCTGTTCCGCGACGCCAAGCTGTACGaaa                                                                                                             <  7:55110/149‑1 (MQ=255)                                     ccGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCg                                                                                                          <  4:86863/149‑1 (MQ=255)                                     ccGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCg                                                                                                          >  4:218865/1‑149 (MQ=255)                                       gCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGt                                                                                                        <  3:231124/149‑1 (MQ=255)                                         aaGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGc                                                                                                      <  8:69002/149‑1 (MQ=255)                                         aaGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGc                                                                                                      <  6:146831/149‑1 (MQ=255)                                            gACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCgg                                                                                                   >  8:273870/1‑149 (MQ=255)                                             aCGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCgg                                                                                                   >  7:225074/1‑148 (MQ=255)                                                     ggCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTg                                                                                           >  8:78809/1‑148 (MQ=255)                                                          gATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTg                                                                                                       >  7:204185/1‑131 (MQ=255)                                                          caTCCTCTACCCCGCCGAGCGCGCCACGCAAATCGCCCTGCAGGCGATCCAGATACTTGGCGGCAACGCCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTg                                                                                                       <  8:204185/130‑1 (MQ=255)                                                                  acacCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATg                                                                             >  3:118381/1‑149 (MQ=255)                                                                   cacCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGc                                                                            <  7:78809/149‑1 (MQ=255)                                                                   caacgccgAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGc                                                                            <  4:190784/146‑1 (MQ=255)                                                                                 ccACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGaa                                                              <  3:218865/149‑1 (MQ=255)                                                                                  cACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAAc                                                             >  2:163056/1‑149 (MQ=255)                                                                                  cACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAAc                                                             >  1:229801/1‑149 (MQ=255)                                                                                      cAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAACTGtt                                                         <  8:225074/149‑1 (MQ=255)                                                                                      cAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAACTGtt                                                         <  4:118381/149‑1 (MQ=255)                                                                                                    ggCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAACTGTTCAACGAAACCCGCt                                           <  7:273870/149‑1 (MQ=255)                                                                                                          ccAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAACTGTTCAACGAAACCCGCTGAACa                                      >  6:127261/1‑148 (MQ=255)                                                                                                          ccAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAACTGTTCAACGAAACCCGCTGAACa                                      >  1:108066/1‑148 (MQ=255)                                                                                                             gATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGgccgccaagaatctggatcgcctccagggccatttgcgtggcacgctcggcggtgtacaggatcacgccggcagcgtccttgcgggtggtttcgccccggtcgcacgc                                  <  5:169389‑M2/149‑109 (MQ=255)                                                                                                             gATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAACTGTTCAACGAAACCCGCTGAACATAAg                                  >  5:254230/1‑149 (MQ=255)                                                                                                                tCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAACTGTTCAACGAAACCCGCTGAACATAAGGGa                               >  4:154159/1‑149 (MQ=255)                                                                                                                  ttGGCGGCAACGGCTATATCAACGAATTCCCGGCTGgccgccaagaatctggatcgcctccagggccatttgcgtggcacgctcggcggtgtacaggatcacgccggcagcgtccttgcgggtggtttcgcca                                             >  4:142084‑M2/1‑36 (MQ=255)                                                                                                                  ttGGCGGCAACGGCTATATCAACGAATTCCCGGCTGgccgccaagaatctggatcgcctccagggccatttgcgtggcacgctcggcggtgtacaggatcacgccggcagcgtccttgcgggtggtttcgcca                                             <  3:142084‑M2/133‑98 (MQ=255)                                                                                                                           aCGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAACTGTTCAACGAAACCCGCTGAACATAAGGGACGGGCGCACAt                    >  4:334154/1‑149 (MQ=255)                                                                                                                           aCGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAACTGTTCAACGAAACCCGCTGAACATAAGGGACGGGCGCACAt                    <  1:163056/149‑1 (MQ=255)                                                                                                                                  tatCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAACTg                                                           <  4:143134/103‑1 (MQ=255)                                                                                                                                  tatCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAACTg                                                           >  3:143134/1‑103 (MQ=255)                                                                                                                                     cAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCcgc                                                                 <  6:244634/94‑1 (MQ=255)                                                                                                                                     cAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCcgc                                                                 >  5:244634/1‑94 (MQ=255)                                                                                                                                       aCGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAACTGTTCAACGAAACCCGCTGAACATAAGGGACGGGCGCACATGGCTACCTTGca        >  8:48161/1‑149 (MQ=255)                                                                                                                                           aTTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGACCGCGAACTGTTCAACGAAACCCGCTGAACATAAGGGACGGGCGCACATGGCTACCTTGCACAcc    >  6:355988/1‑149 (MQ=255)                                                                                                                                            ttCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAACTGTTCAACGAAACCCGCTGAACATAAGGGACGGGCGCACATGGCTACCTTGCACAcc    >  6:346386/1‑148 (MQ=255)                                                                                                                                              cccGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAACTGTTCAACGAAACCCGCTGAACATAAGGGACGGGCGCACATGGCTACCTTGCACACCCa  <  2:108066/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                             TGCCGTGGCTCAGGCGTGCGACCGTGGCGAAACCACCCGCAAGGACGCTGCCGGCGTGATCCTGTACACCGCCGAGCGTGCCACGCAAATGGCCCTGGAGGCGATCCAGATTCTTGGCGGCAACGGCTATATCAACGAATTCCCGGCTGGCCGCCTGTTGCGCGACGCCAAGCTGTACGAAATCGGTGCCGGCACCAGTGAAATCCGCCGGATGCTGATCGGCCGCGAACTGTTCAACGAAACCCGCTGAACATAAGGGACGGGCGCACATGGCTACCTTGCACACCCA  >  NC_002947/4589050‑4589338

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.