New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4727724 =	72 (1.220)	5 (0.090)	5/250	NT	7.3%	intergenic (‑343/+61)	brnQ/sucD	branched‑chain amino acid transporter/succinyl‑CoA synthetase subunit alpha
	?	NC_002947	4727773 =	59 (1.050)					intergenic (‑392/+12)	brnQ/sucD	branched‑chain amino acid transporter/succinyl‑CoA synthetase subunit alpha

TACATGTTTGTCGTCTGTGTGACCGAGGACGGCAGGTATTATCCTCGGATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAGGGCCTTGCCGATGTCAGCCAGGGAACGCACGGTTTTCACACCCGCGTCC  >  NC_002947/4727579‑4727869                                                                                                                                                    |                                                                                                                                                  atcatctccggcggcaagggcactgcggacgagaagttcgccgccctgcgggacgcgggtgtgaaaaccgtgcgttccctggctgacatcggcaaggccctggccgagctgactggctgggaagccaagaagtaatactgctacacccc                                                                                                                                                  <  7:83554‑M1/2‑1 (MQ=255) atcatctccggcggcaagggcactgcggacgagaagttcgccgccctgcaggacgcgggtgtgaaaaccgtgcgttccctggctgacatcggcaaggccctggccgagctgactggctgggaagccaagaagtaatactgctacacccc                                                                                                                                                  >  6:219608‑M1/148‑149 (MQ=255) atcatctccggcggcaagggcactgcggacgagaagttcgccgccctgcaggacgcgggtgtgaaaaccgtgcgttccctggctgacatcggcaaggccctggccgagctgactggctgggaagccaagaagtaatactgctacacccc                                                                                                                                                  <  2:9282‑M1/2‑1 (MQ=255) atcatctccggcggcaagggcactgcggacgagaagttcgccgccctgcaggacgcgggtgtgaaaaccgtgcgttccctggctgacatcggcaaggccctggccgagctgactggctgggaagccaagaagtaatactgctacacccc                                                                                                                                                  <  2:191443‑M1/2‑1 (MQ=255)    atctccggcggcaagggcactgcggacgagaagttcgccgccctgcaggacgcgggtgtgaaaaccgtgcgttccctggctgacatcggcaaggccctggccgagctgactggctgggaagccaagaagtaatactgctacaccCCCca                                                                                                                                               <  2:233067‑M1/5‑1 (MQ=255)       tttGTCGTCTGTGTGACCGAGGACGGCAGGTATTATCCTCGGATTGAAACATTCGTCTGCGTTAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATa                                                                                                                                           <  3:210574/148‑1 (MQ=255)         tGTCGTCTGTGTGACCGAGGACGGCAGGTATTATCCTCGGATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACg                                                                                                                                         >  5:116821/1‑148 (MQ=255)          gtcgtcTGTGTGACCGAGGACGGCAGGTATTATCCTCGGATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGa                                                                                                                                        >  4:18826/1‑148 (MQ=255)          gtcgtcTGTGTGACCGAGGACGGCAGGTATTATCCTCGGATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGa                                                                                                                                        >  3:334847/1‑148 (MQ=255)            cgtcTGTGTGACCGAGGACGGCAGGTATTATCCTCGGATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATAc                                                                                                                                          <  2:138341/144‑1 (MQ=255)            cgtcTGTGTGACCGAGGACGGCAGGTATTATCCTCGGATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATAc                                                                                                                                          >  1:138341/1‑144 (MQ=255)             gtcTGTGTGACCGAGGACGGCAGGTATTATCCTCGGATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGa                                                                                                                                        <  5:167925/145‑1 (MQ=255)             gtcTGTGTGACCGAGGACGGCAGGTATTATCCTCGGATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGa                                                                                                                                        >  6:167925/1‑145 (MQ=255)             gtcTGTGTGACCGAGGACGGCAGGTATTATCCTCGGATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACaaa                                                                                                                                    <  5:159650/149‑1 (MQ=255)             gtcTGTGTGACCGAGGACGGCAGGTATTATCCTCGGATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACa                                                                                                                                      >  8:243393/1‑147 (MQ=255)                  tgtgACCGAGGACGGCAGGTATTATCCTCGGATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAgg                                                                                                                                  <  8:140661/146‑1 (MQ=255)                  tgtgACCGAGGACGGCAGGTATTATCCTCGGATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCa                                                                                                                               <  7:270057/149‑1 (MQ=255)                    tgACCGAGGACGGCAGGTATTATCCTCTGATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCAc                                                                                                                              <  5:230119/148‑1 (MQ=255)                     gACCGAGGACGGCAGGTATTATCCTCGGATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAATCCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCAccc                                                                                                                            >  4:82225/1‑149 (MQ=255)                      aCCGAGGACGGCAGGTATTATCCTCGGATTGAAACATTCGTCTGCGTGAAAATTCGCTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAGAGGCCAcct                                                                                                                            >  1:101674/1‑148 (MQ=255)                        cGAGGACGGCAGGTATTATCCTCGGATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCAccttcg                                                                                                                         >  6:267695/1‑145 (MQ=255)                        cGAGGACGGCAGGTATTATCCTCGGATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCg                                                                                                                           >  6:189766/1‑147 (MQ=255)                        cGAGGACGGCAGGTATTATCCTCGGATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCg                                                                                                                           >  6:26520/1‑147 (MQ=255)                        cGAGGACGGCAGGTATTATCCTCGGATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGaa                                                                                                                         <  3:315524/149‑1 (MQ=255)                           ggACGGCATGTATTATCCTCGGATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGt                                                                                                                      <  5:219850/149‑1 (MQ=255)                                gCAGGTATTATCCTCGGATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCTTCGGGTGGCct                                                                                                                 <  5:267695/149‑1 (MQ=255)                                  aGGTATTATCATCGGATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAAACTCTATTGCCAGAACCGGACTCTTCGCGGGTAAACCCGCTCCT‑ACGAACACAACATACGACAAAGGCCAACCGAAGGTGGAct                                                                                                                 >  7:313276/1‑147 (MQ=255)                                   agttcgccgccctgcgggacgcgggtgtgaaaaccgtgcgttccctggctgacatcggcaaggccctggccgagctgactggctgggaagccaagaagtaatactgctacaccCCCCACGCGC‑ACAAAGGCCACCCGAAGGTGGCctct                                                                                                               >  8:83554‑M1/114‑149 (MQ=255)                                     ttcgccgccctgcaggacgcgggtgtgaaaaccgtgcgttccctggctgacatcggcaaggccctggccgagctgactggctgggaagccaagaagtaatactgctacaccCCCCACGCGC‑ACAAAGGCCACCCGAAGGTGGCCTCtgt                                                                                                             >  6:212889‑M1/112‑149 (MQ=255)                                         atCCTCGGATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGcgcg                                                                                                        >  7:193486/1‑149 (MQ=255)                                            cTCGGATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTgg                                                                                                     >  5:30263/1‑149 (MQ=255)                                            cTCGGATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTgg                                                                                                     >  3:63557/1‑149 (MQ=255)                                               ggATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTggggg                                                                                                  <  4:327197/149‑1 (MQ=255)                                               ggATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTggggg                                                                                                  <  4:333444/149‑1 (MQ=255)                                               ggATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTgggg                                                                                                   <  5:189766/148‑1 (MQ=255)                                               ggATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTgggg                                                                                                   <  8:144503/148‑1 (MQ=255)                                                 aTTGAAACATTCGTCTGCGTGAAAATTT‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGgt                                                                                                >  4:9456/1‑149 (MQ=255)                                                  ttGAAACATTCGTCTGCGTGAAAATTT‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGgtg                                                                                               <  3:9456/149‑1 (MQ=255)                                                  aggacgcgggtgtgaaaaccgtgcgttccctggctgacatcggcaaggccctggccgagctgactggctgggaagccaagaagtaatactgctacagcCCCCACATACGACATAGGCCACCCGAAGGTGGCCTCTGTGCGCGTgggggg                                                                                                 >  7:39995‑M1/99‑149 (MQ=255)                                                     aaaCATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑GCGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAg                                                                                            >  1:136446/1‑149 (MQ=255)                                                        cATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAg                                                                                         <  6:116821/149‑1 (MQ=255)                                                             gtgaaaaccgtgcgttccctggctgacatcggcaaggccctggccgagctgactggctgggaagccaagaagtaatactgctacaccCCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTAt                                                                                      <  2:214597‑M1/62‑1 (MQ=255)                                                             gTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTa                                                                                    >  6:111939/1‑149 (MQ=255)                                                                   gTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTActtctt                                                                              >  4:325534/1‑149 (MQ=255)                                                                   gTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTActtctt                                                                              <  3:325534/149‑1 (MQ=255)                                                                    tGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTg                                                                             <  8:193486/149‑1 (MQ=255)                                                                      gtgcgttccctggctgacatcggcaaggccctggccgagctgactggctgggaagccaagaagtaatactgctacaccCCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTg                                                                             >  1:214597‑M1/79‑149 (MQ=255)                                                                        aaTTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCtt                                                                         <  4:334847/149‑1 (MQ=255)                                                                                aTCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCccagc                                                                   >  4:299670/1‑148 (MQ=255)                                                                                    aaCCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑GCGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTc                                                              <  2:136446/149‑1 (MQ=255)                                                                                    aaCCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGt                                                               >  4:19833/1‑148 (MQ=255)                                                                                     aCCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTActtc                                                                                >  4:163831/1‑130 (MQ=255)                                                                                     aCCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTActtc                                                                                <  3:163831/130‑1 (MQ=255)                                                                                      ccTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAg                                                            >  5:313293/1‑149 (MQ=255)                                                                                            gaagaaTCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGc                                                      >  6:236737/1‑149 (MQ=255)                                                                                                   ctctATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAGGGcc                                               >  8:73216/1‑149 (MQ=255)                                                                                                    tctATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCccagc                                                                   >  6:159922/1‑128 (MQ=255)                                                                                                    tctATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAGGGCCt                                              >  6:165984/1‑149 (MQ=255)                                                                                                      tATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAGGGCCTTg                                            >  3:113913/1‑149 (MQ=255)                                                                                                      tATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAGGGCCTTg                                            >  3:105699/1‑149 (MQ=255)                                                                                                        ttGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAGGGCCTTGcc                                          >  3:272192/1‑149 (MQ=255)                                                                                                        ttGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAGGGCCTTGc                                           <  3:18826/148‑1 (MQ=255)                                                                                                           ccAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAGGGCCTTGCCGAt                                       >  4:65061/1‑149 (MQ=255)                                                                                                           ccAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAGGGCCTTGCCGAt                                       >  3:24550/1‑149 (MQ=255)                                                                                                               cACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAGGGCCTTGCCGATGt                                     >  8:223983/1‑147 (MQ=255)                                                                                                                    gCCTCTTCGCGGGTAACCCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAGGGCCTTGCCGATGTCAGCCAg                              >  4:351822/1‑149 (MQ=255)                                                                                                                     ccTCTTCGCGGGTAAACCCGCTCCTAACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAGGGCCTTGCCGATGTCAGCCAg                              >  1:191443/1‑149 (MQ=255)                                                                                                                     ccTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAGGGCCTTGCCGATGTCAGCCAgg                             >  1:233067/1‑149 (MQ=255)                                                                                                                      ctctTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGgt                                                                                                <  8:108462/81‑1 (MQ=255)                                                                                                                      ctctTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGgt                                                                                                >  7:108462/1‑81 (MQ=255)                                                                                                                            gcgGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAGGGCCTTGCCGATGTCAGCCAGGGAACGCa                      >  6:198099/1‑149 (MQ=255)                                                                                                                                gTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAGGGCCTTGCCGATGTCAGCCAGGGAACGCACGGt                  <  4:24550/149‑1 (MQ=255)                                                                                                                                gTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAGGGCCTTGCCGATGTCAGCCAGGGAACGCACGGt                  >  8:179670/1‑149 (MQ=255)                                                                                                                                  aaaCCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAGGGCCTTGCCGATGTCAGCCAGGGAACGCACGGttt                >  2:87346/1‑149 (MQ=255)                                                                                                                                    aCCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAGGGCCTTGCCGATGTCAGCCAGGGAACGCACGGtttt               >  4:347613/1‑148 (MQ=255)                                                                                                                                    aCCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAGGGCCTTGCCGATGTCAGCCAGGGAACGCACGGTTTTc              <  7:73216/149‑1 (MQ=255)                                                                                                                                     cccGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAGGGCCTTGCCGATGTCAGCCAGGGAACGCACGGTTTTca             >  8:163353/1‑149 (MQ=255)                                                                                                                                      ccGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAggg                                                 <  4:152762/112‑1 (MQ=255)                                                                                                                                      ccGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAggg                                                 >  3:152762/1‑112 (MQ=255)                                                                                                                                        gCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAGGGCCTTGCCGATGTCAGCCAGGGAACGCACGGTTTTCacac          <  7:179670/149‑1 (MQ=255)                                                                                                                                            cT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAGGGCCTTGCCGATGTCAGCCAGGGAACGCACGGTTTTCACAccc        <  4:63557/147‑1 (MQ=255)                                                                                                                                             t‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAGGGCCTTGCCGATGTCAGCCAGGGAACGCACGGTTTTCACACCcgcg     >  3:99284/1‑149 (MQ=255)                                                                                                                                                 gAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAGGGCCTTGCCGATGTCAGCCAGGGAACGCACGGTTTTCACACCCGCGTcc  <  3:299670/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                  TACATGTTTGTCGTCTGTGTGACCGAGGACGGCAGGTATTATCCTCGGATTGAAACATTCGTCTGCGTGAAAATTC‑CTATCAAACCTATCGAAGAATCTCTATTGCCAGCACCGGCCTCTTCGCGGGTAAACCCGCTCCT‑ACGAACCCCACATACGACAAAGGCCACCCGAAGGTGGCCTCTGTGCGCGTGGGGGGTGTAGCAGTATTACTTCTTGGCTTCCCAGCCAGTCAGCTCGGCCAGGGCCTTGCCGATGTCAGCCAGGGAACGCACGGTTTTCACACCCGCGTCC  >  NC_002947/4727579‑4727869

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.