New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5518943	69 (1.170)	4 (0.070)	4/252	NT	6.0%	coding (787/789 nt)	PP_4852	AraC family transcriptional regulator
	?	NC_002947	= 5519011	58 (1.020)					coding (719/789 nt)	PP_4852	AraC family transcriptional regulator

CTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCTGAATCGGCAGGCCGGCTTCCAGCGCTTCGATGGCA  >  NC_002947/5518797‑5519091                                                                                                                                                   |                                                                                                                                                     ctgctgCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAg                                                                                                                                                     <  5:349339/148‑1 (MQ=255)       cgcgGTCTTGGCAGGTAAACCTTGGGCACTGACCACCACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGcccc                                                                                                                                               <  8:145142/148‑1 (MQ=255)          ggTATTGGTAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTcc                                                                                                                                           >  4:53452/1‑149 (MQ=255)          ggTATTGGTAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTcc                                                                                                                                           >  2:189986/1‑149 (MQ=255)                 gCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTg                                                                                                                                    >  4:73117/1‑149 (MQ=255)                    gCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCcg                                                                                                                                 >  6:273452/1‑149 (MQ=255)                     cGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCcgg                                                                                                                                >  1:236828/1‑149 (MQ=255)                      gAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCcggc                                                                                                                               >  8:37790/1‑149 (MQ=255)                        aaCCTTTGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCGAAGAATGTTCAGCGCCCCGTCCGCGCCTGCcggcgg                                                                                                                             <  6:332152/149‑1 (MQ=255)                          ccTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTa                                                                                                                           <  7:227533/149‑1 (MQ=255)                           cTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAtcgccatgttccagcgccaggcccggtg                                                                                                                          >  1:1885‑M1/1‑121 (MQ=255)                                gCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTc                                                                                                                     <  6:339871/149‑1 (MQ=255)                                  aCTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCTCCCCGTCCGCGCCTGCCGGCGGTACTGCTCgg                                                                                                                   <  7:37790/149‑1 (MQ=255)                                  aCTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCgg                                                                                                                   <  6:156864/149‑1 (MQ=255)                                  aCTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCgg                                                                                                                   <  5:273452/149‑1 (MQ=255)                                  aCTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCgg                                                                                                                   >  1:339533/1‑149 (MQ=255)                                    tGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAtcgccatgttccagcgccaggcccggtgtacgccc                                                                                                                   >  3:282293‑M1/1‑112 (MQ=255)                                    tGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCgg                                                                                                                   <  6:90112/147‑1 (MQ=255)                                    tGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCgg                                                                                                                   >  5:90112/1‑147 (MQ=255)                                    tGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGc                                                                                                                 >  5:73062/1‑149 (MQ=255)                                    tGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGc                                                                                                                 >  7:8338/1‑149 (MQ=255)                                         aacaCCGCCAGCGCCAGTCACGGGATTTTCAGCACTTTCATGCAGTGGTCTCCTTGGCTCCGCGCCCGAGGCACGGTGAGCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCTTCCGCGCCTGACGGCGGTACTGCTCGGGAGTaca                                                                                                            >  5:203135/1‑149 (MQ=255)                                             ccGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCgg                                                                                                        <  2:236828/149‑1 (MQ=255)                                              cgccagcgccagTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCggg                                                                                                       <  3:73117/149‑1 (MQ=255)                                                 cagcgccagTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCt                                                                                                    >  8:208450/1‑149 (MQ=255)                                                       cagTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGgcgc                                                                                               >  2:173112/1‑148 (MQ=255)                                                              gggATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACCCCGGGCCTGGCGCTGGAACAt                                                                                       >  6:316167/1‑149 (MQ=255)                                                                gATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGGGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATgg                                                                                     <  6:73062/149‑1 (MQ=255)                                                                 aTTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGc                                                                                    <  6:80434/149‑1 (MQ=255)                                                                  tttGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGc                                                                                    >  2:180112/1‑148 (MQ=255)                                                                     gcagcaCTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGAt                                                                                 <  5:56136‑M2/148‑2 (MQ=255)                                                                      cagcaCTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGAtg                                                                                <  4:290149‑M2/148‑3 (MQ=255)                                                                         caCTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAtcgccatgttccagcgccaggcccggtgtacgcccgagcagtaccgccggcaggcgcggacggggcgctgaaca                                                                            <  2:1885‑M1/149‑75 (MQ=255)                                                                            tttCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAGGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGcc                                                                          >  4:34497/1‑148 (MQ=255)                                                                            tttCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGcc                                                                          >  6:23249/1‑148 (MQ=255)                                                                              tCATGGAGTGGTCTCGTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAtcgccatgttccagcgccaggcccggtgtacgcccgagcagtaccgccggcaggcgcggacggggcgctgaacattct                                                                        <  4:282293‑M1/148‑79 (MQ=255)                                                                              tCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCg                                                                         >  8:111069/1‑147 (MQ=255)                                                                              tCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCg                                                                         >  7:315209/1‑147 (MQ=255)                                                                                   gAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAgcgc                                                                   <  1:189986/148‑1 (MQ=255)                                                                                   gAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAgcgc                                                                   <  3:53452/148‑1 (MQ=255)                                                                                   gAGTGCTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAgcgc                                                                   <  4:126540/148‑1 (MQ=255)                                                                                      tGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCgctgct                                                               >  8:296153/1‑149 (MQ=255)                                                                                        gTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGc                                                                                                      >  8:148996/1‑108 (MQ=255)                                                                                        gTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGctgctg                                                              >  5:174019/1‑148 (MQ=255)                                                                                         tctcCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGctgctg                                                              >  4:100269/1‑147 (MQ=255)                                                                                           tcCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGc                                                          >  6:356495/1‑149 (MQ=255)                                                                                             cTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAACGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGCACATGGCGATGCACGCCGAAGCGCTGCTGTAGcc                                                         >  1:100486/1‑148 (MQ=255)                                                                                                     cgcgCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGaa                                                                                          <  4:212662/107‑1 (MQ=255)                                                                                                     cgcgCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGaa                                                                                          >  3:212662/1‑107 (MQ=255)                                                                                                     cgcgCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTAGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGaa                                                <  1:173112/149‑1 (MQ=255)                                                                                                      gcgcCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAg                                               >  3:165125/1‑149 (MQ=255)                                                                                                          ccGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCaa                                           <  7:296153/149‑1 (MQ=255)                                                                                                             aTGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTGCCGCGACCCGTCCGCGCCTGCCGGCGGTACTGCTCGTGCGTACACCGGGCCTGTCGCGTGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCAAAGGTAGAAGGCAATgg                                        <  6:203135/149‑1 (MQ=255)                                                                                                              tGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGc                                       <  5:140902/149‑1 (MQ=255)                                                                                                                cACGGTGATCGAGCTGAGTGTAGCCAGGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCt                                     <  3:34497/149‑1 (MQ=255)                                                                                                                 aCGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCt                                     >  6:38823/1‑148 (MQ=255)                                                                                                                   ggTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCTGaa                                  >  3:221599/1‑149 (MQ=255)                                                                                                                    gTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGACGAAGGCAATGGCCTGAAt                                 >  6:281505/1‑149 (MQ=255)                                                                                                                     tGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCTGAATc                                <  6:56136/149‑1 (MQ=255)                                                                                                                      gATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCTGAATCg                               >  7:21753/1‑149 (MQ=255)                                                                                                                         cGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCTGAATCGGc                             <  8:315209/148‑1 (MQ=255)                                                                                                                          gAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCTGAATCGGCa                            <  5:356495/148‑1 (MQ=255)                                                                                                                           aGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCTGAATCGGCAgg                          <  8:8338/149‑1 (MQ=255)                                                                                                                             cTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCTGAATCGGCAGGcc                        <  7:111069/149‑1 (MQ=255)                                                                                                                                 gtgtAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCTGAATCGGCAGGCCGGCt                    <  8:21753/149‑1 (MQ=255)                                                                                                                                    tAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCTGAATCGGCAGGCCGGCTTcc                 <  1:6809/149‑1 (MQ=255)                                                                                                                                    tAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCTGAATCGGCAGGCCGGCTTc                  <  7:208450/148‑1 (MQ=255)                                                                                                                                      gCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCTGAATCGGCAGGCCGGCTTCCAg               <  5:281505/149‑1 (MQ=255)                                                                                                                                       ccAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCt                                     >  4:241404/1‑126 (MQ=255)                                                                                                                                       ccAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCt                                     <  3:241404/126‑1 (MQ=255)                                                                                                                                       ccAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCTGAATCGGCAGGCCGGCTTCCAgc              <  6:174019/149‑1 (MQ=255)                                                                                                                                       ccAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCTGAATCGGCAGGCCGGCTTCCAgc              >  6:40015/1‑149 (MQ=255)                                                                                                                                         aaGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCTGaa                                  <  7:42738/127‑1 (MQ=255)                                                                                                                                         aaGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCTGAATCGGCAGGCCGGCTTCCAgcgc            >  3:333166/1‑149 (MQ=255)                                                                                                                                         aaGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCTGAATCGGCAGGCCGGCTTCCAgcgc            >  1:250491/1‑149 (MQ=255)                                                                                                                                         aaGAATGTTCAGCGCCCCGTCCGCGCCTCCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCTGaa                                  >  8:42738/1‑127 (MQ=255)                                                                                                                                          aGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGAtgaacattcttggctacactcagctcgatcaccgtgcatcgggcgcggagccaacgagaccactccatga            <  4:282293‑M2/148‑71 (MQ=255)                                                                                                                                              tGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGAtgaacattcttggctacactcagctcgatcaccgtgcatcgggcgcggagccaaggagaccactccatgaaagtg       <  2:1885‑M2/149‑76 (MQ=255)                                                                                                                                                ttCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCTGAATCGGCAGGCCGGCTTCCAGCGCTTCGAt      <  3:100269/148‑1 (MQ=255)                                                                                                                                                ttCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCTGAATCGGCAGGCCGGCTTCCAGCGCTTCGAt      <  4:165125/148‑1 (MQ=255)                                                                                                                                                ttCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCTGAATCGGCAGGCCGGCTTCCAGCGCTTCGATg     >  6:143443/1‑149 (MQ=255)                                                                                                                                                 tCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCTGAATCGGCAGGCCGGCTTCCAGCGCTTCGATgg    >  4:326316/1‑149 (MQ=255)                                                                                                                                                  cAtcgccatgttccagcgccaggcccggtgtacgcccgagcagtaccgccggcaggcgcggacggggcgctgaacattcttggctacactcagctcgatcaccgtgcatcgggcgcggagccaaggagaccactccatgaaagtgctg    <  4:290149‑M1/148‑147 (MQ=255)                                                                                                                                                   atcgccatgttccagcgccaggcccggtgtacgcccgagcagtaccgccggcaggcgcggacggggcgctgaacattcttggctacactcagctcgatcaccgtgcatcgggcgcggagccaaggagaccactccatgaaagtgctgc   <  5:56136‑M1/148‑148 (MQ=255)                                                                                                                                                   aGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCTGAATCGGCAGGCCGGCTTCCAGCGCTTCGATGGCa  >  7:323938/1‑149 (MQ=255)                                                                                                                                                   aGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCTGAATCGGCAGGCCGGCTTCCAGCGCTTCGATGGCa  >  3:357632/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                     CTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCATGGAGTGGTCTCCTTGGCTCCGCGCCCGATGCACGGTGATCGAGCTGAGTGTAGCCAAGAATGTTCAGCGCCCCGTCCGCGCCTGCCGGCGGTACTGCTCGGGCGTACACCGGGCCTGGCGCTGGAACATGGCGATGAACGCCGAAGCGCTGCTGTAGCCAAGGTCGAAGGCAATGGCCTGAATCGGCAGGCCGGCTTCCAGCGCTTCGATGGCA  >  NC_002947/5518797‑5519091

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.