New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5543804 =58 (0.980)3 (0.050) 3/250 NT 5.4% coding (339/864 nt) PP_4875 membrane protein
?NC_002947 5543859 = 50 (0.890)coding (284/864 nt) PP_4875 membrane protein

GCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAGGCACCCGCAATCACCAGAAAGGTGATGGGATCACCCA  >  NC_002947/5543656‑5543949
                                                                                                                                                    |                                                                                                                                                 
gCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCCCCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTgc                                                                                                                                                   >  5:235696/1‑149 (MQ=255)
gCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTgc                                                                                                                                                   <  6:70880/149‑1 (MQ=255)
  gatgctacatcggtcatcgccggcggcttgctggccgggctggccgtgtgggtcatgggtgatcccatcacctttctggtgattgcgggtgccttggccctggccgccatgttgcgtgccgagcacccctggagccgggtgttgctcgc                                                                                                                                                 >  2:306652‑M1/147‑149 (MQ=255)
     aaCGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTgcgccag                                                                                                                                              >  2:89402/1‑149 (MQ=255)
      aCGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCCCCGGCGAGCACCGGTTGCCCTTCGATATTCGGCATGGCTTCGGCAAACTCCTTGGCCACCACCTCGAAGGTTTgcgccagc                                                                                                                                             >  6:376642/1‑149 (MQ=255)
      aCGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGCATCAGCTCACCGGAGAGCACCGGTTGACCTTAGATTTTCGGCATGGCTTAGGCAAACGCCTTGGCCAGCACATCGAAGCTTTgcgccag                                                                                                                                              >  7:194997/1‑148 (MQ=255)
                 atcgccggcggcttgctggccgggctggccgtgtgggtcatgggtgatcccatcacctttctggtgattgcgggtgccttggccctggccgccatgttgcgtgccgagcacccctggagccgggtgttgctcgcca                                                                                                                                               <  8:197046‑M1/5‑1 (MQ=255)
                 atcgccggcggcttgctggccgggctggccgtgtgggtcatgggtgatcccatcacctttctggtgattgcgggtgccttggccctggccgccatgttgcgtgccgagcacccctggagccgggtgttgctcgcca                                                                                                                                               >  7:197046‑M1/132‑136 (MQ=255)
                  tGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAg                                                                                                                                  >  7:263484/1‑148 (MQ=255)
                    aaCAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGc                                                                                                                                 <  7:18169/147‑1 (MQ=255)
                       aaTTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAg                                                                                                                            >  8:202418/1‑149 (MQ=255)
                         ttGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGc                                                                                                                          <  4:137081/149‑1 (MQ=255)
                            cACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTg                                                                                                                        >  7:108633/1‑148 (MQ=255)
                               cGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAg                                                                                                                    <  7:202418/149‑1 (MQ=255)
                                  cACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCa                                                                                                                 >  2:116039/1‑149 (MQ=255)
                                    ctgctgTGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACgg                                                                                                              >  1:289041/1‑149 (MQ=255)
                                       ctgTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACCAGGCTGAAAGCCACGGc                                                                                                             >  4:313847/1‑148 (MQ=255)
                                          tgGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGaa                                                                                                          >  8:268611/1‑148 (MQ=255)
                                          tgGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGaa                                                                                                          <  1:116039/148‑1 (MQ=255)
                                           ggAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAaca                                                                                                        >  2:151647/1‑149 (MQ=255)
                                                cGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCa                                                                                                   <  5:183933/149‑1 (MQ=255)
                                                 gACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCAc                                                                                                  >  3:345811/1‑149 (MQ=255)
                                                  aCCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGcc                                                                                                                  <  5:104830/132‑1 (MQ=255)
                                                  aCCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGcc                                                                                                                  >  6:104830/1‑132 (MQ=255)
                                                   ccAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTg                                                                                                >  4:42159/1‑149 (MQ=255)
                                                     gtcctggctgagcccatcacctttctggtgattgcgggtgccttggccctggccgccatgttgcgtgccgagcacccctggagccgggtgttgctCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTgg                                                                                               >  8:257383‑M1/96‑148 (MQ=255)
                                                       cacaGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGa                                                                                            <  7:278497/149‑1 (MQ=255)
                                                         caGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAg                                                                                           >  8:96064/1‑148 (MQ=255)
                                                          aGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTgcgc                                                                                                                                                 <  6:126150/93‑1 (MQ=255)
                                                          aGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTgcgc                                                                                                                                                 >  5:126150/1‑93 (MQ=255)
                                                          aGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGc                                                                                          <  2:113082/148‑1 (MQ=255)
                                                          aGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGc                                                                                          >  1:113082/1‑148 (MQ=255)
                                                               ggATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACAcc                                                                                    <  1:320081/149‑1 (MQ=255)
                                                                tatcatcTCACCGGAGATCACCGGGTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACAccc                                                                                   <  8:263484/148‑1 (MQ=255)
                                                                 cccatcacctttctggtgattgcgggtgccttggccctggccgccatgttgcgtgccgagcacccctggagccgggtgttgctCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGa                                                                                            <  1:295944‑M1/56‑1 (MQ=255)
                                                                 cccatcacctttctggtgattgcgggtgccttggccctggccgccatgttgcgtgccgagcacccctggagccgggtgttgctCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGa                                                                                            >  2:295944‑M1/84‑139 (MQ=255)
                                                                 aTCAGCTCACCGGAGATCACAGGTTGCCCTTCGATTTTCGTCATGGCTTCTGCAATCGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAATCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGATCAACAccc                                                                                   <  6:235696/148‑1 (MQ=255)
                                                                 aTCAGCTCACCGGAGAGCACCGGTTGCCGTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACAcc                                                                                    <  4:296530/147‑1 (MQ=255)
                                                                            ggAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGt                                                                       <  7:268611/149‑1 (MQ=255)
                                                                             gagaGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTg                                                                      >  7:204527/1‑149 (MQ=255)
                                                                                   acgggTTGCCCTTCGATTTTCTGCATTGCTTCGGCAAACGCCTTGGCCAGCTCATCGAAGGTTTGCTGCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGATCTACACCCGGCTGCAGGGGTGCTCGGc                                                                <  8:194997/146‑1 (MQ=255)
                                                                                   aCCGGTTGCCCTTCGATTTTCGGCAGGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGc                                                                <  2:302280/149‑1 (MQ=255)
                                                                                      ggTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACg                                                             >  8:16207/1‑149 (MQ=255)
                                                                                            ccTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACAt                                                       >  8:116340/1‑149 (MQ=255)
                                                                                            ccTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACAt                                                       >  3:139129/1‑149 (MQ=255)
                                                                                            ccTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGAACTGGCGAGCAACACCCGGCTCCCGGGGTCCTCGGCACGCAACAt                                                       >  7:95434/1‑149 (MQ=255)
                                                                                              ttCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATgg                                                     >  1:282762/1‑149 (MQ=255)
                                                                                                cGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATggc                                                    <  1:151647/148‑1 (MQ=255)
                                                                                                cGATTTTCGGCATGGCTTCGCCAAACGCCTTGGCCAGCACATAGACGGTTTGCGCCAGCGCCAGATCAAGGACGAGGCGGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATgg                                                     <  5:376642/147‑1 (MQ=255)
                                                                                                            tGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAg                                       <  8:108633/149‑1 (MQ=255)
                                                                                                              gCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAgg                                      <  6:366734/148‑1 (MQ=255)
                                                                                                              gCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAGGc                                     >  2:107792/1‑149 (MQ=255)
                                                                                                                ttCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAGGCAc                                   >  2:274724/1‑149 (MQ=255)
                                                                                                                   ggCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAGGCACCCg                                <  8:204527/149‑1 (MQ=255)
                                                                                                                    gCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAGGCACCCg                                >  3:163869/1‑148 (MQ=255)
                                                                                                                      aaaCGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAGGCACCCGCaa                             >  2:78578/1‑149 (MQ=255)
                                                                                                                      aaaCGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAGGCACCCGCaa                             >  8:181814/1‑149 (MQ=255)
                                                                                                                      aaaCGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAGGCACCCGCa                              >  1:184218/1‑148 (MQ=255)
                                                                                                                        aCGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAGGCACCCGCAATc                           <  4:139129/149‑1 (MQ=255)
                                                                                                                          gCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAGGCACCCGCAATCAc                         <  7:181814/149‑1 (MQ=255)
                                                                                                                            cTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAGGCACCCGCAATCAc                         >  3:213511/1‑147 (MQ=255)
                                                                                                                                      acaTCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAGGCACCCGCAATCACCAGAAAGGTGAt             <  2:289041/149‑1 (MQ=255)
                                                                                                                                       caTCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAGGCACCCGCAATCACCAGAAAGGTGATg            <  7:96064/149‑1 (MQ=255)
                                                                                                                                       caTCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAGGCACCCGCAATCACCAGAAAGGTGATg            <  3:42159/149‑1 (MQ=255)
                                                                                                                                        aTCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAGGCACCCGCAATCACCAGAAAGGTGATgg           >  2:75980/1‑149 (MQ=255)
                                                                                                                                         tCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGTCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAGGCACCCGCAATCACCAGAAAGGTGATggg          <  3:313847/149‑1 (MQ=255)
                                                                                                                                         tCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAGGCACCCGCAATCACCAGAAAGGTGATgg           >  2:361155/1‑148 (MQ=255)
                                                                                                                                         tCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAGGCACCCGCAATCACCAGAAAGGTGATgg           >  2:122873/1‑148 (MQ=255)
                                                                                                                                                tttGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAGGCACCCGCAATCACAAGAAAGGTGATGCGATCAcc    >  1:31998/1‑148 (MQ=255)
                                                                                                                                                  tGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAGGCACCCGCAATCACCAGAAAGGTGATGGGATCACCCa  <  2:282762/148‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
GCATCAACGCCAGCACACTGAACAATTGCACCGTCACTGCTGTGGAAGCGACCAGCACAGGGCGGATCAGCTCACCGGAGAGCACCGGTTGCCCTTCGATTTTCGGCATGGCTTCGGCAAACGCCTTGGCCAGCACATCGAAGGTTTGCGCCAGCGCCAGATCAAGCACGAGGCTGAAAGCCACGGCGAACACGGCACTGGCGAGCAACACCCGGCTCCAGGGGTGCTCGGCACGCAACATGGCGGCCAGGGCCAAGGCACCCGCAATCACCAGAAAGGTGATGGGATCACCCA  >  NC_002947/5543656‑5543949

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.