New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5698727 =	61 (1.040)	5 (0.100)	4/228	NT	11.4%	intergenic (+17/‑150)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein
	?	NC_002947	5698810 =	25 (0.490)					intergenic (+100/‑67)	hslU/PP_5002	protease HslVU ATPase subunit/hypothetical protein

AAGTGTCGTTCAGTGCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGC‑TTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTG  >  NC_002947/5698580‑5698873                                                                                                                                                    |                                                                                                                                                     tagacctcgccgggtgcgtaggtgaggctgagggtcttggaggctttgtgcaggttgatggcggtaggcaggcgggccatgggcagaatctctcgggagctgatgaagcacagcttccagcttatgggggagggattcaagggcctctt                                                                                                                                                     <  6:149273‑M1/2‑1 (MQ=255)    acctcgccgggtgcgtaggtgaggctgagggtcttggaggctttgtgcaggttgatggcggtaggcaggcgggccatgggcagaatctctcgggagctgatgaagcacagcttccagcttatgggggagggattcaagggcctcTTcgc                                                                                                                                                  >  5:176639‑M1/145‑149 (MQ=255)    acctcgccgggtgcgtaggtgaggctgagggtcttggaggctttgtgcaggttgatggcggtaggcaggcgggccatgggcagaatctctcgggagctgatgaagcacagcttccagcttatgggggagggattcaagggcctcTTcgc                                                                                                                                                  <  5:11341‑M1/5‑1 (MQ=255)      tCGTTCAGTGCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCgg                                                                                                                                                >  6:352318/1‑149 (MQ=255)      gtcgccgggtgcgtaggtgaggctgaggggcttggaggctttgtgcaggttgatggcggtaggcaggcgggccatgggcagaatctctcgggagctgatgaagcacagcttccagcttatgggggagggattcaagggcctcTTCGCgg                                                                                                                                                >  3:94921‑M1/143‑149 (MQ=255)      ctcgccgggtgcgtaggtgaggctgagggtcttggaggctttgtgcaggttgatggcggtaggcaggcgggccatgggcagaatctctcgggagctgatgaagcacagcttccagcttatgggggagggattcaagggcctcTTCGCgg                                                                                                                                                >  6:59804‑M1/143‑149 (MQ=255)      ctcgccgggtgcgtaggtgaggctgagggtcttggaggctttgtgcaggttgatggaggtaggcaggcgggccatgggcagaatctctcgggagctgatgaagcacagcttccagcttatgggggagggattcaagggcctcTTCGCgg                                                                                                                                                <  1:100648‑M1/7‑1 (MQ=255)        gTTCAGTGCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCgg‑g                                                                                                                                              >  6:46765/1‑148 (MQ=255)         ttCAGTGCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑Gc                                                                                                                                             >  3:169152/1‑148 (MQ=255)          ccgggtgcgtaggtgaggctgagggtcttggaggctttgtgcaggttgatggcggtaggcaggcgggccatgggcagaatctctcgggagctgatgaagcacagcttccagcttatgggggagggattcaagggcctcTTCGCGG‑GCaa                                                                                                                                           >  5:149273‑M1/139‑149 (MQ=255)          ccgggtgcgtaggtgaggctgagggtcttggaggctttgtgcaggttgatggcggtaggcaggcgggccatgggcagaatctctcgggagctgatgaagcacagcttccagcttatgggggagggattcaagggcctcTTCGCGG‑GCaa                                                                                                                                           >  3:17211‑M1/139‑149 (MQ=255)            aGTGCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGc                                                                                                                                         <  5:46765/149‑1 (MQ=255)            aGTGCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGc                                                                                                                                         <  4:199965/149‑1 (MQ=255)             gTGCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGcc                                                                                                                                        >  3:80633/1‑149 (MQ=255)                cGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGc                                                                                                                                     <  8:39879/149‑1 (MQ=255)                  gtaggtgaggctgagggtctttgaggcattgtgcagggtgatggcggtaggcaggcgggccatgggcagaatctctcgggagctgatgaagcacagcttccagcttatgggggagggattcaagggcctcTTCGCGG‑GCTTGCCcgcga                                                                                                                                   >  6:11341‑M1/131‑147 (MQ=255)                             cAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCCCCCGCAcggat                                                                                                                         >  1:13504/1‑145 (MQ=255)                              aGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGcca                                                                                                                       >  7:275801/1‑149 (MQ=255)                                ctcccTTGACGAAGCGCCGATGAAGATGGACGCGGCGTATGTGAACAGGCACCTTGGTGAGCTGTGACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGTTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGccac                                                                                                                      <  8:319078/146‑1 (MQ=255)                                cACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGccac                                                                                                                      >  7:116942/1‑148 (MQ=255)                                cACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCATGCACGCGccac                                                                                                                      >  7:319078/1‑148 (MQ=255)                                   ccATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGc                                                                                                                                     <  5:242490/130‑1 (MQ=255)                                   ccATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGc                                                                                                                                     >  6:242490/1‑130 (MQ=255)                                   ccATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCCCGCGCcaccac                                                                                                                   >  1:267948/1‑148 (MQ=255)                                   ccATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCcaccac                                                                                                                   >  3:288936/1‑148 (MQ=255)                                   ccATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCcaccac                                                                                                                   >  7:44574/1‑148 (MQ=255)                                   caaTGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACATGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCCATCCCGCGCATGCAAACCccacccc                                                                                                                   >  3:231179/3‑146 (MQ=255)                                     aTGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAAc                                                                                                                >  4:21551/1‑149 (MQ=255)                                            aGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGGAGCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTgg                                                                                                          <  1:251981/149‑1 (MQ=255)                                             gcgtCGATCTGGATCGGCGCGGCGTATGTGAACAGCCACGTGGGTGAGCTGGCGCAGCACGGAGACCTGTCGCGTTACAGTCTGTAAGCCCGGTTTCGCCGGGTTCGCGG‑GCAGGCCCGCTCCTGCCCGCGCCACCACACCGCTggggg                                                                                                        >  8:213304/1‑148 (MQ=255)                                             gcgtCGATCTGGATCGGCGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAACCCGCACCATCACGCGCCACCCCAACCCGTgggg                                                                                                        >  8:59846/1‑148 (MQ=255)                                                ccGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCCAGCCCGCGCCATCACGCGCCCCCCCCCCCCTTggggcgg                                                                                                     >  2:227571/1‑145 (MQ=255)                                                ccGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCtg                                                                                                     >  3:169655/1‑149 (MQ=255)                                                  gATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACCGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCtgtg                                                                                                   <  8:275801/149‑1 (MQ=255)                                                  gATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCtgtg                                                                                                   <  6:337013/149‑1 (MQ=255)                                                   aTCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTgtgg                                                                                                  <  8:44574/149‑1 (MQ=255)                                                    aggttgatggcggtaggcaggcgggccatgggcagaatctctcgggagctgatgaagcacagcttccagcttatgggggagggattcaagggcctcTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTgtggt                                                                                                 <  8:96199‑M1/53‑1 (MQ=255)                                                       aGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCGACCCCCCGCCGGCACCCGCCCCCCCCACCCATGGGCGGgtgggggt                                                                                              >  4:309674/1‑145 (MQ=255)                                                       aGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAt                                                                                              <  8:116942/149‑1 (MQ=255)                                                        gATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATc                                                                                             <  7:276084/149‑1 (MQ=255)                                                            gACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTg                                                                                         <  4:288936/149‑1 (MQ=255)                                                              cgcgGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCg                                                                                       <  1:246166/149‑1 (MQ=255)                                                               gcggcgTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCgg                                                                                      <  3:21551/149‑1 (MQ=255)                                                                   cgTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGgggc                                                                                  <  6:156713/149‑1 (MQ=255)                                                                     tATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAAccc                                                                                                              <  7:134703/119‑1 (MQ=255)                                                                     tATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCAAGCGCCACCACAAccc                                                                                                              >  8:134703/1‑119 (MQ=255)                                                                      aggcgggccatgggcagaatctctcgggagctgatgaagcacagcttccagcttatgggggagggattcaagggcctcTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGgggcgg                                                                                <  8:349858‑M1/70‑1 (MQ=255)                                                                      aggcgggccatgggcagaatctctcgggagctgatgaagcacagcttccagcttatgggggagggattcaagggcctcTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGgggcgg                                                                                >  7:349858‑M1/79‑148 (MQ=255)                                                                       tgtgAACAGCCCCCTGCGAGAGCTGGCACAGAACGACGACCTGTCGCGTTACAGTCTCTAAGACCGGTGTCGACAGTTTCGCTT‑GCAAGCCCGATCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGgggcggg                                                                               <  5:256427/148‑1 (MQ=255)                                                                       tgtgAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGgggcggg                                                                               <  6:347366/148‑1 (MQ=255)                                                                       tgtgAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCCCCCGCACGGATCACCACAGGCCCAAGGGTTGTGGTGGCGCGTGCAGgagcgggc                                                                              <  5:161918/149‑1 (MQ=17)                                                                       ggcgggccatgggcagaatctctcgggagctgatgaagcacagcttccagcttatgggggagggattcaagggcctcTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGtggcgggc                                                                              >  7:96199‑M1/78‑149 (MQ=255)                                                                       ggcgggccatgggcagaatctctcgggagctgatgaagcacagcttccagcttatgggggagggattcaagggcctcTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGAACCGTGCGGgggcgggc                                                                              >  2:178370‑M1/78‑149 (MQ=255)                                                                         tgAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGC‑tt                                                                           <  7:213304/149‑1 (MQ=255)                                                                          gAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GGCCCCCCCCGCCCGGACCCGCCCCCCCCACCCCAGGGGCGGGGGTGGTGCGCGCGGgggcggggggg                                                                           >  1:329453/1‑145 (MQ=255)                                                                           aaCAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGC‑TTg                                                                          <  4:169655/148‑1 (MQ=255)                                                                             cAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGgggcgggc                                                                              >  6:332132/1‑143 (MQ=255)                                                                             cAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGgggcgggc                                                                              <  5:332132/143‑1 (MQ=255)                                                                             cAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGC‑TTGccc                                                                       <  5:352318/149‑1 (MQ=255)                                                                                ccACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGC‑TTGCCcgcg                                                                    <  2:267948/149‑1 (MQ=255)                                                                                  aCCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GGCCACCCCCGCCAGCACCCGCCCCCCCACACCCTGGGGCGGGGGTGTTACCGGGGGGGGGGGGC‑GTGGCcgccg                                                                   >  8:26949/1‑146 (MQ=255)                                                                                  aCCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCtg                                                                                                     >  4:112090/1‑115 (MQ=255)                                                                                  aCCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCtg                                                                                                     <  3:112090/115‑1 (MQ=255)                                                                                     tGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GGCAGCCCGCGCCAGCCAGCGCCCCCCCACCCCGAGGGGGCGTGGGGTGACGTGGGGGGGCGGGG‑GTGGCCGGGAagag                                                               >  4:240289/1‑149 (MQ=255)                                                                                           aGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGC‑TTGCCCGCGAAGAGGCCCtt                                                         <  6:362702/149‑1 (MQ=255)                                                                                           aGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGC‑TTGCCCGCGAAGAGGCCCt                                                          <  4:80633/148‑1 (MQ=255)                                                                                           aGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGC‑TTGCCCGCGAAGAGGCCCt                                                          <  1:227571/148‑1 (MQ=255)                                                                                           aGCTGGCACAGAACGAAGACCTGGCGGGTAACATTGTGAACGCCCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCCCCACAACCCTTGGGCCTGTGGTTATCCGTGCGGGGGCGGGC‑TTGCCCGCGAAGAGGCCCt                                                          <  6:140436/148‑1 (MQ=38)                                                                                                 cacaGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGC‑TTGCCCGCGAAGAGGCCCTTGAAt                                                     <  7:180347/147‑1 (MQ=255)                                                                                                  acaGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCCACCCCCCAACAGGAAGCGCCACCCCCACCCATGGGCCGGGTGTGGTCCGTGCGGGGGCGGGCGTTGCCC‑CGCAAAGGCCCCTgctaca                                                   >  5:81023/1‑143 (MQ=255)                                                                                                   caGAACGAAGCCCTGTCGCGTTACATTCTGTACGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCCCAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGC‑TTGCCCGCGAAGAGGCCCTTGAAtccct                                                 <  3:309674/149‑1 (MQ=255)                                                                                                      aaCGAAGACCTGTCGCGTTACATTCGGAAAGACCGGTTGCGACAGTTGCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGC‑TTGCCCGCGAAGAGGCCCTTGAAtccctccc                                              <  3:240289/149‑1 (MQ=255)                                                                                                         gAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GAAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGC‑TTGCCCGCGAAGAGGCCCTTGaa                                                      <  5:345548/138‑1 (MQ=255)                                                                                                                  tCGCTTTACATTATGTAACACCGGTTTCTAATTTTTGGCGG‑GCACGCCGGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGGGGGC‑TTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTgg                                   <  1:339130/148‑1 (MQ=255)                                                                                                                                              gACAGTTTCGCGG‑GCAAGCCCGCTCCTGCCCGCGCCACCACAACCCTTGGGCCTGTGGTTATCCGTGCGGGGGCGGGC‑TTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCt                              <  3:247585/125‑1 (MQ=255)                                                                                                                                               aCAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGC‑TTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTcc              <  3:301211/140‑1 (MQ=255)                                                                                                                                                  gTTTCGCGG‑GCACGCCCGCTCCTGCACGCGCCACCCCAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGC‑TTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTg  <  4:231179/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                     AAGTGTCGTTCAGTGCGGGCGACCTGGCCAGCACCCATGACGAAGCGCCGATCCAGATCGACGCGGCGTATGTGAACAGCCACCTGGGTGAGCTGGCACAGAACGAAGACCTGTCGCGTTACATTCTGTAAGACCGGTTTCGACAGTTTCGCGG‑GCAAGCCCGCTCCTGCACGCGCCACCACAACCCTTGGGCCTGTGGTGATCCGTGCGGGGGCGGGC‑TTGCCCGCGAAGAGGCCCTTGAATCCCTCCCCCATAAGCTGGAAGCTGTGCTTCATCAGCTCCCGAGAGATTCTG  >  NC_002947/5698580‑5698873

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.