New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5721453	43 (0.730)	3 (0.060)	3/220	NT	6.2%	intergenic (+34/+76)	PP_5021/glnQ	methyl‑accepting chemotaxis transducer/glutamine transport ATP‑binding protein GlnQ
	?	NC_002947	= 5721496	55 (1.110)					intergenic (+77/+33)	PP_5021/glnQ	methyl‑accepting chemotaxis transducer/glutamine transport ATP‑binding protein GlnQ

GATGTTTCGGATCAGACCAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGGCC  >  NC_002947/5721309‑5721598                                                                                                                                                 |                                                                                                                                                  gATGTTTCGGATCAGACCAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTcaca                                                                                                                                                >  2:157594/1‑148 (MQ=255)  ttGTTTCGGATCATCACAGCGCGGCCAGTGTGCAGACGGCAGCCTCGTTTGGAGTGCTGGAGCTGTTGGGGCAGCAATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTcacaca                                                                                                                                              <  6:198306/148‑1 (MQ=255)     tttCGGATCAGACCAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGGTTGGGCGGTTCAGCATCAGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTGACACAgg                                                                                                                                            >  3:273249/1‑148 (MQ=255)         ggATCAGACCAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACAt                                                                                                                                       >  1:1490/1‑149 (MQ=255)          gATCAGACCAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACAt                                                                                                                                       >  1:24839/1‑148 (MQ=255)                aCCAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCAcccc                                                                                                                                 >  5:292556/1‑148 (MQ=255)                  cAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCCCCATCTACCCGGCCAACACCGGTAACAAAGGTCCATCAcccc                                                                                                                                 >  6:306803/1‑146 (MQ=255)                   aGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCAt                                                                                                                              >  6:54019/1‑148 (MQ=255)                    gcgcGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATc                                                                                                                             >  3:110821/1‑148 (MQ=255)                     cgcgGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCaa                                                                                                                           <  5:54019/149‑1 (MQ=255)                            aGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAgtg                                                                                                                    <  2:1490/149‑1 (MQ=255)                                     aCGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATg                                                                                                           <  7:112737/149‑1 (MQ=255)                                     aCGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATg                                                                                                           <  2:24839/149‑1 (MQ=255)                                         cAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAg                                                                                                        >  8:222517/1‑148 (MQ=255)                                            ccTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGgagc                                                                                                    >  7:222517‑M2/1‑145 (MQ=255)                                              tCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGgagcgg                                                                                                  <  3:134673‑M2/149‑7 (MQ=255)                                              tCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGgagcgg                                                                                                  <  5:163093‑M2/149‑7 (MQ=255)                                                gggtgGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGGTTGGGTGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGCCATGCAGgagcgggc                                                                                                <  2:348964‑M2/147‑9 (MQ=255)                                                gAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGgagcgggc                                                                                                <  5:283748‑M2/149‑9 (MQ=255)                                                gAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGgagcggg                                                                                                 >  4:110821‑M2/1‑141 (MQ=255)                                                  gTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCCTCAAGGCAGTGGTGGACATGCAGgagcgggctt                                                                                              <  2:304870‑M2/149‑11 (MQ=255)                                                           tGGAGCAGTTGGGGCAGCAATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCctgcatgtccaccactgccttgatgggggtgatgtacctgtgtgagcgg                                                                                                  <  5:345760‑M1/136‑50 (MQ=255)                                                           tGGAGCAGTTGGGGCAGCAATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCctgcatgtccaccactgccttgatgggggtgatgtacctgtgtgagcgg                                                                                                  >  6:345760‑M1/1‑87 (MQ=255)                                                              aGCAGTTGGGGCAGCAATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCgaagaa                                                                                  <  6:292556/149‑1 (MQ=255)                                                                  gTTGGGGCAGCAATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCctgcatgtccaccactgccttgatgggggtgatgtacctgtttgagcgggatt                                                                                              >  8:341438‑M1/1‑80 (MQ=255)                                                                        gcagcaATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCgg                                                                        >  4:107673/1‑149 (MQ=255)                                                                        gcagcaATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCgg                                                                        >  7:71001/1‑149 (MQ=255)                                                                        gcagcaATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCgg                                                                        >  6:350516/1‑149 (MQ=255)                                                                           gcaATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTa                                                                     <  6:163093/149‑1 (MQ=255)                                                                                 gCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCa                                                                <  3:107673/148‑1 (MQ=255)                                                                                     gggATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTgg                                                           >  8:238300/1‑149 (MQ=255)                                                                                                gCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAgtggtg                                                                                                                 <  5:279723/84‑1 (MQ=255)                                                                                                gCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATAACCCCCATCAAGGCAgtggtg                                                                                                                 >  6:279723/1‑84 (MQ=255)                                                                                                  ggTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACCGCACCTGGCGCAGGAATGCCt                                              >  8:282527/1‑149 (MQ=255)                                                                                                  ggTTCAGCATCAGAGTTCGCCTAGCCCTCTTCGCGGTCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCt                                              <  8:274402/149‑1 (MQ=255)                                                                                                    ttCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACCTCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTgc                                            >  3:42161/1‑149 (MQ=255)                                                                                                           tCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACCCAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCAcgcg                                     >  2:130405/1‑149 (MQ=255)                                                                                                                    gcctcgccCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTc                             <  7:238300/148‑1 (MQ=255)                                                                                                                    gcctcgccCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTc                             <  8:71001/148‑1 (MQ=255)                                                                                                                    gcctcgccCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTc                             <  4:134673/148‑1 (MQ=255)                                                                                                                     cctcgccCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGGGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCgg                           <  5:350516/149‑1 (MQ=255)                                                                                                                      ctcgccCTCTTCGCGGGCAAGCCCGCTCCCACAGGTACATCACCCCCCTCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCCCCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGgc                          >  5:232276/1‑149 (MQ=255)                                                                                                                      ctcgccCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGGCATGGAGGAGCGGGCTTGCCCGCGCAGAAGCCCGCGCGGGTACCGCACCAGGCGGAGGCATGCCTGCGGCCGCGGGGCTTTCGgc                          >  1:101104/1‑149 (MQ=255)                                                                                                                      ctcgccCTCTTCGCGGGCAAGCCCGCTAACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGgc                          >  6:158004/1‑149 (MQ=255)                                                                                                                       tcgccCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGgcg                         >  6:291311/1‑149 (MQ=255)                                                                                                                             tctTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCt                                              >  7:279998/1‑122 (MQ=255)                                                                                                                             tctTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCt                                              <  8:279998/122‑1 (MQ=255)                                                                                                                             tctTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCg                    >  4:250347/1‑148 (MQ=255)                                                                                                                             tctTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCg                    >  3:296865/1‑148 (MQ=255)                                                                                                                              ctTCGCGGCCAAGCCCGCTCACCCAGGTACACCACCCCCATCACGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCgaa                  <  1:348964/149‑1 (MQ=255)                                                                                                                               ttCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCg                    >  6:216883/1‑146 (MQ=255)                                                                                                                                 cgcgGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCgaa                  <  1:157594/146‑1 (MQ=255)                                                                                                                                  gcgGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAAt              >  3:136144/1‑149 (MQ=255)                                                                                                                                        aaTCCCGCTCAAACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGgagcgggcttgcccgcgaagagggcgaggcgaagtcagatgctgaaccgcccaaccatcccccgcaattgctgccccaac                        >  8:341438‑M2/1‑53 (MQ=255)                                                                                                                                        aaGCCCGCTCctgcatgtccaccactgccttgaggggggtgatgtacctgtgtgagcgggcttgcccgcgaagagggcgaggcgaagtcagatgctgaaccgcccaaccatcccccgcaattgctgccccaactgctccagctctccac        <  2:304870‑M1/149‑140 (MQ=255)                                                                                                                                        aaGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGcc        >  6:70929/1‑149 (MQ=255)                                                                                                                                          gCCCGCTCctgcatgtccaccactgccttgatgggggtgatgtacctgtgtgagcgggcttgcccgcgaagagggcgaggcgaagtcagatgctgaaccgcccaaccatcccccgcaattgctgccccaactgctccagctctccactc      <  5:283748‑M1/149‑142 (MQ=255)                                                                                                                                          gCCCGCTCctgcatggccaccactgccttgatgggggtgatgtacctgtgtgagcgggcttgcccgcgaagagggcgaggcgaagtcagatgctgaaccacccaaccatcccccgcaattgctgccccaactgctccagctctccaccc      <  2:348964‑M1/149‑142 (MQ=255)                                                                                                                                          gCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCgg      <  3:250347/149‑1 (MQ=255)                                                                                                                                           cccGCTCctgcatgtccaccactgccttgatgggggtgatgtacctgtgtgagcgggcttgcccgcgaagagggcgaggcgaagtcagatgctgaaccgcccaaccatcccccgcaattgctgccccaactgctccagctctccactc      >  4:110821‑M1/1‑7 (MQ=255)                                                                                                                                            ccGCTCctgcatgtccaccactgccttgatgggggtgatgtacctgtgtgagcgggcttgcccgcgaagagggcgaggcgaagtcagatgctgaaccgcccaaccatcccccgcaattgctgccccaactgctccagctctccactcga    <  5:163093‑M1/149‑144 (MQ=255)                                                                                                                                            ccGCTCctgcatgtccaccactgccttgatgggggtgatgtacctgtgtgagcgggcttgcccgcgaagagggcgaggcgaagtcagatgctgaaccgcccaaccatcccccgcaattgctgccccaactgctccagctctccactcga    <  3:134673‑M1/149‑144 (MQ=255)                                                                                                                                            ccGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGgagcgggcttgcccgcgaagagggcgaggcgaagtcagatgctgaaccgcccaaccatcccccgcaattgctgccccaactgctcca                 >  6:345760‑M2/1‑49 (MQ=255)                                                                                                                                            ccGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGgagcgggcttgcccgcgaagagggcgaggcgaagtcagatgctgaaccgcccaaccatcccccgcaattgctgccccaactgctcca                 <  5:345760‑M2/136‑88 (MQ=255)                                                                                                                                              gCTCctgcatgtccaccactgccttgatgggggtgatgtacctgtgtgagcgggcttgcccgcgaagagggcgaggcgaagtcagatgctgaaccgcccaaccatcccccgcaattgctgccccaactgctccagctctccactcgagg  >  7:222517‑M1/1‑4 (MQ=255)                                                                                                                                                 |                                                                                                                                                  GATGTTTCGGATCAGACCAGCGCGGCCAGTGAGCAGACGGCAGCCTCGAGTGGAGAGCTGGAGCAGTTGGGGCAGCAATTGCGGGGGATGGTTGGGCGGTTCAGCATCTGACTTCGCCTCGCCCTCTTCGCGGGCAAGCCCGCTCACACAGGTACATCACCCCCATCAAGGCAGTGGTGGACATGCAGGAGCGGGCTTGCCCGCGAAGAAGCCCGCGCGGTTACAGCACCTGGCGCAGGAATGCCTGCGCACGCGGGTCTTTCGGCGCAGCGAAGAATGCGGCCGGGGCC  >  NC_002947/5721309‑5721598

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.