New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5978244 =	63 (1.070)	3 (0.060)	3/242	NT	5.2%	coding (873/993 nt)	PP_5241	LuxR family transcriptional regulator
	?	NC_002947	5978305 =	52 (0.960)					coding (812/993 nt)	PP_5241	LuxR family transcriptional regulator

GTCGTCGACGATGCACACCCCTCTGCTCATGCGCCGCCCAGGCTCGCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGC  >  NC_002947/5978098‑5978390                                                                                                                                                   |                                                                                                                                                   gtcgtcgACGATGCACACCCCTCTGCTCATGCGCCGCCCAGGCTCGCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTc                                                                                                                                                  >  2:64757/1‑149 (MQ=255)    gtcgACGATGCACACCCCTCTGCTCATGCGCCGCCCAGGCTCGCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCt                                                                                                                                               >  5:134542/1‑149 (MQ=255)    gtcgACGATGCACACCCCTCTGCTCATGCGCCGCCCAGGCTCGCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCt                                                                                                                                               <  7:237874/149‑1 (MQ=255)    accaagccgttcgatgaagaccagttgctgaccctgttgcagacagtgcgcgcccgggccgtggccgaaggccacaagtggctgcaggcgcggcaggtcgaggaaaagtaccagcgcctgactcagcgtgagcgccaggtcttCTCGc                                                                                                                                                >  2:295872‑M1/144‑148 (MQ=255)      caagccgttcgatgaagaccagttgctgaccctgttgcagacagtgcgcgcccgggccgtggccgaaggccacaagtggctgcaggcgcggcaggtcgaggaaaagtaccagcgcctgactcagcgtgagcgccaggtcttCTCGCTgg                                                                                                                                             >  7:29226‑M1/142‑149 (MQ=255)       aagccgttcgatgaagaccagttgctgaccctgttgcagacagtgcgcgcccgggccgtggccgaaggccacaagtggctgcaggcgcggcaggtcgaggaaaagtaccagcgcctgactcagcgtgagcgccaggtcttCTCGCTGGt                                                                                                                                            >  6:94382‑M1/141‑149 (MQ=255)        agccgttcgatgaagaccagttgctgaccctgttgcagacagtgcgcgcccgggccgtggccgaaggccacaagtggctgcaggcgcggcaggtcgaggaaaagtaccagcgcctgactcagcgtgagcgccaggtcttCTCGCTGGTg                                                                                                                                           >  8:243060‑M1/140‑149 (MQ=255)         gccgttcgatgaagaccagttgctgaccctgttgcagacagtgcgcgcccgggccgtggccgaaggccacaagtggctgcaggcgcggcaggtcgaggaaaagtaccagcgcctgactcagcgtgagcgccaggtcttCTCGCTGGTGc                                                                                                                                          <  8:184650‑M1/11‑1 (MQ=255)              cacaCCCCTCTGCTCATGCGCCGCCCAGGCTCGCAGACCGCGCTCCGAGGAGGTTGTGCAGGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGGCACCTCGCTGGTGCCGAt                                                                                                                                      <  6:104681/148‑1 (MQ=255)               acacCCCTCTGCTCATGCGCCGCCCAGGCTCGCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCt                                                                                                                                    >  8:212241/1‑149 (MQ=255)                 acCCCTCTGCTCATGCGCCGCCCAGGCTCGCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTg                                                                                                                                           >  8:261698/1‑140 (MQ=255)                 acCCCTCTGCTCATGCGCCGCCCAGGCTCGCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTg                                                                                                                                           <  7:261698/140‑1 (MQ=255)                 acCCCTCTGCTCATGCGCCGCCCAGGCTCGCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGc                                                                                                                                  <  2:32371/149‑1 (MQ=255)                   cccTCTGCTCATGCGCCGCCCAGGCTCGCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCt                                                                                                                                >  6:46939/1‑149 (MQ=255)                   cccTCTGCTCATGCGCCGCCCAGGCTCGCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCt                                                                                                                                >  7:348432/1‑149 (MQ=255)                     ctctGCTCATGCGCCGCCCAGGCTCGCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTgg                                                                                                                              <  4:255976/149‑1 (MQ=255)                          cTCATGCGCCGCCCAGGCTCGCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGAt                                                                                                                          <  4:225318/148‑1 (MQ=255)                           tCATGCGCCGCCCAGGCTCGCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCt                                                                                                                                >  2:45533/1‑141 (MQ=255)                           tCATGCGCCGCCCAGGCTCGCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCt                                                                                                                                <  1:45533/141‑1 (MQ=255)                                cgccgcCCAGGCTCGCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTtg                                                                                                                   >  1:310243/1‑149 (MQ=255)                                 gccgccCCGACTCGCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTtgt                                                                                                                  <  7:225182/149‑1 (MQ=255)                                 gccgccCAGGCTCGCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCCCCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTtgt                                                                                                                  >  5:117933/1‑149 (MQ=255)                                   cgccCAGGCTCGCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGc                                                                                                                <  1:64757/149‑1 (MQ=255)                                      ccAGGCTCGCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGAc                                                                                                             <  5:35162/149‑1 (MQ=255)                                       cAGGCTCGCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCgcc                                                                                                             >  4:259868/1‑146 (MQ=255)                                          gCTCGCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAgc                                                                                                         >  5:160382/1‑149 (MQ=255)                                            tCGCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGAt                                                                                                                          >  8:288099/1‑130 (MQ=255)                                             cGCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAgccgc                                                                                                      >  1:63166/1‑149 (MQ=255)                                              gCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAgccgcc                                                                                                     >  2:90752/1‑149 (MQ=255)                                              gCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAgccgcc                                                                                                     <  5:46939/149‑1 (MQ=255)                                              gCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCACTGGTGCCGATCTGCCTGGCGATCTGCTTGTCGCACAAgcagat                                                                                                     <  8:153604/149‑5 (MQ=255)                                                aGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCt                                                                                                                                               <  6:319953/105‑1 (MQ=255)                                                aGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCt                                                                                                                                               >  5:319953/1‑105 (MQ=255)                                                aGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTa                                                                                                   <  6:117933/149‑1 (MQ=255)                                                  aCCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTac                                                                                                  >  3:108949/1‑148 (MQ=255)                                                    cgcgCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTaccac                                                                                               >  3:286402/1‑149 (MQ=255)                                                      cgcTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTaccac                                                                                               >  2:77496/1‑147 (MQ=255)                                                       gcacgggcagtcgcctaaggccacaactggctgcaggcgcggcaggtcgaggaaaactaccagcgcctcaatcagcgtgagcgccaggtcttCTCGCTGgtgctag                                                                                                                                       <  2:107557‑M1/14‑4 (MQ=255)                                                            ggccgtggccgaaggccacaagtggctgcaggcgcggcaggtcgaggaaaagtaccagcgcctgactcagcgtgagcgccaggtcttCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCgaga                                                                                       >  7:184650‑M1/88‑149 (MQ=255)                                                               gaggTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGagaaga                                                                                    <  6:134542/149‑1 (MQ=255)                                                                   ttGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTg                                                                                <  8:348432/149‑1 (MQ=255)                                                                       gCATGGCCGCGAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCATAGAGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGgcgc                                                                            >  1:119084/1‑149 (MQ=255)                                                                       gCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGgcgc                                                                            >  1:69608/1‑149 (MQ=255)                                                                          tGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCa                                                                         <  4:108949/149‑1 (MQ=255)                                                                            cacaagtggctgcaggcgcggcaggtcgaggaaaagtaccagcgcctgactcagcgtgagcgccaggtcttCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCga                                                                                         >  7:42132‑M1/72‑131 (MQ=255)                                                                            cacaagtggctgcaggcgcggcaggtcgaggaaaagtaccagcgcctgactcagcgtgagcgccaggtcttCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCga                                                                                         <  8:42132‑M1/60‑1 (MQ=255)                                                                                   gCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTc                                                                <  7:212241/149‑1 (MQ=255)                                                                                    cTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCa                                                               <  6:160382/149‑1 (MQ=255)                                                                                      ccAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCt                                                                     >  8:25272/1‑141 (MQ=255)                                                                                      ccAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCt                                                                     <  7:25272/141‑1 (MQ=255)                                                                                            gcgagcgGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTgg                                                       <  4:188965/149‑1 (MQ=255)                                                                                                      cTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCt                                             >  7:334610/1‑149 (MQ=255)                                                                                                      cTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCt                                             <  4:286402/149‑1 (MQ=255)                                                                                                          aTCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGAc                                         >  6:117205/1‑149 (MQ=255)                                                                                                          aTCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGAc                                         >  4:12511/1‑149 (MQ=255)                                                                                                             ttGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTg                                      >  1:332826/1‑149 (MQ=255)                                                                                                              tGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGc                                     >  7:25700/1‑149 (MQ=255)                                                                                                               gTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGc                                     <  8:334610/148‑1 (MQ=255)                                                                                                                 tCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTAccacca                                                                                             >  6:47070/1‑90 (MQ=255)                                                                                                                 tCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTAccacca                                                                                             <  5:47070/90‑1 (MQ=255)                                                                                                                  caagatgTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCg                                           <  4:229896/136‑1 (MQ=255)                                                                                                                  caagatgTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCg                                           >  3:229896/4‑139 (MQ=255)                                                                                                                   atgatgTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCgcgc                                >  3:333537/1‑149 (MQ=255)                                                                                                                     gatgTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCt                              >  1:340313/1‑149 (MQ=255)                                                                                                                      atgTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCt                              <  2:340313/148‑1 (MQ=255)                                                                                                                      atgTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCt                              <  1:90752/148‑1 (MQ=255)                                                                                                                        gTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTg                             >  4:263233/1‑147 (MQ=255)                                                                                                                         ttcttcTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCa                           <  3:259868/148‑1 (MQ=255)                                                                                                                              cttGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCa                       <  5:117205/147‑1 (MQ=255)                                                                                                                                  tgCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTtgtg                 <  2:332826/149‑1 (MQ=255)                                                                                                                                    cACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTgg                <  4:333537/148‑1 (MQ=255)                                                                                                                                     aCCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGcc              >  1:258179/1‑149 (MQ=255)                                                                                                                                             cgtcACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCa      >  5:51119/1‑149 (MQ=255)                                                                                                                                              gtcACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCAc     <  8:25700/149‑1 (MQ=255)                                                                                                                                                 aCCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGc  >  3:62492/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                   GTCGTCGACGATGCACACCCCTCTGCTCATGCGCCGCCCAGGCTCGCAGACCGCGCTCCGAGGAGGTTGTGCATGGCCGCAAGCTCCAGCAGCGAGCGGGACTGCATCTTGTTCATGATGTTCTTCTTGTGCACCTTGGTCGTCACCTCGCTGGTGCCGATCTGCCTGGCGATCTGCTTGTGCGACAAGCCGCCTACCACCAGCGAGAAGACCTGGCGCTCACGCTGAGTCAGGCGCTGGTACTTTTCCTCGACCTGCCGCGCCTGCAGCCACTTGTGGCCTTCGGCCACGGC  >  NC_002947/5978098‑5978390

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.