| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 437159 | 45 (0.760) | 4 (0.070) | 4/248 | NT | 7.8% | coding (129/888 nt) | PP_0358 | membrane protein |
| ? | NC_002947 | = 437191 | 52 (0.930) | coding (97/888 nt) | PP_0358 | membrane protein | |||||
TGCCCCGCTCAGTGCCAGGATGCCCAGCCGGCGCGGGTTGTTGCGCAGTTCACGCCACCAGCCGGGGTGTTTCCACACCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGTGCATGCAGAATCCTTGCTTAGGTTGCTAAATAAAGCGACGCCTATTGTAGACAG > NC_002947/437045‑437337 | tGCCCCGCTCAGTGCCAGGATGCCCAGCCGGCGCGGGTTGTTGCGGAGTTCACGCCACCAGCCGGGGTGTTTCCACACCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACgc < 1:258420‑M2/149‑3 (MQ=255) ccccGCTCAGTGCCAGGATGCCCAGCCGGCGCGGGTTGTTGCGCAGTTCACGCCACCAGCCGGGGTGTTTCCACACCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACgctc < 7:50237‑M2/149‑5 (MQ=255) aGTGCCAGGATGCCCAGCCGGCGCGGGTTGTTGCGCAGTTCACGCCACCAGCCGGGGTGTTTCCACACCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGc < 1:335125/149‑1 (MQ=255) aGTGCCAGGATGCCCAGCCGGCGCGGGTTGTTGCGCAGTTCACGCCACCAGCCGGGGTGTTTCCACACCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGc > 7:114778/1‑149 (MQ=255) ccAGGATGCCCAGCCGGCGCGGGTTGTTGCGCAGTTCACGCCACCAGCCGGGGTGTTTCCACACCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCtt > 6:322167/1‑148 (MQ=255) aGGATGCCCAGCCGGCGCGGGTTGTTGCGCAGTTCACGCCACCAGCCGGGGTGTTTCCACACCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGaa < 5:301579/149‑1 (MQ=255) ggATGCCCAGCCGGCGCGGGTTGTTGCGCAGTTCACGCCACCAGCCGGGGTGTTTCCACACCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAg > 7:1303/1‑149 (MQ=255) cgcgGGTTGTTGCGCAGTTCACGCCACCAGCCGGGGTGTTTCCACACCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAg < 8:50237/149‑1 (MQ=255) ggTTGTTGCGCAGTTCACGCCACCAGCCGGGGTGTTTCCACACCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGccc < 8:319832/149‑1 (MQ=255) gcgcAGTTCACGCCACCAGCCGGGGTGTTTCCACACCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAgatga > 2:319736/1‑149 (MQ=255) gcgcAGTTCACGCCACCAGCCGGGGTGTTTCCACACCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAgatg < 6:255355/148‑1 (MQ=255) gcAGTTCACGCCACCAGCCGGGGTGTTTCCACACCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAgatgatc > 8:197130/1‑148 (MQ=255) gcAGTTCACGCCACCAGCCGGGGTGTTTCCACACCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGatgatg < 2:258420/149‑1 (MQ=255) ttCACGCCACCAGCCGGGGTGTTTCCACACCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGatgatg > 4:6170/1‑145 (MQ=255) ttCACGCCACCAGCCGGGGTGTTTCCACACCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTa < 3:6170/147‑1 (MQ=255) ccaccaGCCGGGGTGTTTCCACACCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGG‑CCCAGATGATGTAGGCGCTCaa < 4:352751/149‑1 (MQ=255) accaGCCGGGGTGTTTCCACACCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAg > 3:190959/1‑149 (MQ=255) ccGGGGTGTTTCCACACCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGATAAGGCCCCAGATGATGTAGGCGCTCAAGCCAAg > 8:302571/1‑149 (MQ=255) gggTGTTTCCACACCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTAt < 4:190959/149‑1 (MQ=255) ggTGTTTCCACACCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATg < 8:1303/149‑1 (MQ=255) ggTGTTTCCACACCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATg > 4:168656/1‑149 (MQ=255) tttCCACACCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCaa < 4:199878/135‑1 (MQ=255) tttCCACACCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCaa > 3:199878/1‑135 (MQ=255) ccACACCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATCGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCcgc > 6:107726/1‑149 (MQ=255) cacaCCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCAACGCCGTGACGCTCTGGATTGCCTTGAAGTAGAGGGGG‑AAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGa < 6:75728/149‑1 (MQ=255) acCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGAcg > 5:17429/1‑149 (MQ=255) cAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGAcgcg > 6:12724/1‑149 (MQ=255) gcagcagcGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGTCGCGGGtac < 1:319736/149‑3 (MQ=255) gcagcGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTgcg > 7:336322/1‑149 (MQ=255) cGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGt < 8:114778/149‑1 (MQ=255) cGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGt < 8:336322/149‑1 (MQ=255) cGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCACTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGt > 3:318962/1‑149 (MQ=255) gAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGtgcatgc < 7:197130/149‑1 (MQ=255) tGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACgctctggtcagcactgttcggctcgctgctgctactggtgtggaaacaccccggctggtggcgtgaactgcgcaacaacccgcgccgg < 2:362916‑M2/130‑89 (MQ=255) tGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACgctctggtcagcactgttcggctcgctgctgctactggtgtggaaacaccccggctggtggcgtgaactgcgcaacaacccgcgccgg > 1:362916‑M2/1‑42 (MQ=255) tGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCGCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGTGCATGCAGAATCCtt > 7:237194/1‑149 (MQ=255) aCCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGTGCATGCAGAATCCTTGc < 3:168656/149‑1 (MQ=255) cAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACgctctggtcagcactgttcggctcgctgctgctactggtgtggaaacaccccggctggtggcgtgaactgcgcaacaacccgcgccggctgggcatcctggcactgagcgg < 4:149123‑M2/149‑112 (MQ=255) cAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGTGCATGCAGAATCCTTGCt > 2:47766/1‑148 (MQ=255) cAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGTGCATGCAGAATCCTTGCt > 5:73721/1‑148 (MQ=255) cAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCACTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGTGCATGCAGAATCCTTGCtt < 4:318962/149‑1 (MQ=255) agCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGTGCATGCAGAATCCTTGCTTAgg < 5:322167/149‑1 (MQ=255) aCCCGGTGGACAATGATCTCCACCGCCGGGACgctctggtcagcactgttcggctcgctgctgctactggtgtggaaacaccccggctggtggcgtgaactgcgcaacaacccgcgccggctgggcatcctggcactgagcggggcact > 3:149123‑M2/1‑32 (MQ=255) ccGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGTGCATGCAGAATCCTTGCTTAGGTTGc > 2:104071/1‑148 (MQ=255) tGGAAAATTATTTCCACCGCCTGGACGCTCTGGATTTCCTTGAATTATAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGTGCATGCTGAATCCTTGCTTAGGTTGCtaaat < 7:52263/149‑1 (MQ=255) gACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGTGCATGCAGAATCCTTGCTTAGGTTGCtaaata < 3:281035/148‑1 (MQ=255) cAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGTGCATGCAGAATCCTTGc < 5:306066/131‑1 (MQ=255) cAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGTGCATGCAGAATCCTTGc > 6:306066/1‑131 (MQ=255) cAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGTGCATGCAGAATCCTTGCTTAGGTTGCTAAATAAAg > 8:252540/1‑149 (MQ=255) aaTGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGTGCATGCAGAATCCTTGCTTAGGTTGCt < 6:319555/140‑1 (MQ=255) aaTGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGTGCATGCAGAATCCTTGCTTAGGTTGCt > 5:319555/1‑140 (MQ=255) aaTGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCACCAGATGATGTAGGAGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGTGCATGCATAATCCTTGCTTAGGTTGCTAAATAAAGc > 5:148941/1‑149 (MQ=255) tGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGTGCATGCAGAATCCTTGCTTa > 8:15801/1‑131 (MQ=255) tGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGTGCATGCAGAATCCTTGCTTa < 7:15801/131‑1 (MQ=255) aTCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGTGCATGCAGAATCCTTGCTTAGGTTGCTAAATAAAGCGAc < 1:47766/148‑1 (MQ=255) tctcCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGTGCATGCAGAATCCTTGCTTAGGTTGCTAAATAAAGCGACGc > 5:52176/1‑149 (MQ=255) ctcCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGTGCATGCAGAATCCTTGCTTAGGTTGCTAAATAAAGCGACGcc > 7:152692/1‑149 (MQ=255) cACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGTGCATGCAGAATCCTTGCTTAGGTTGCTAAATAAAGCGACGc < 1:104071/145‑1 (MQ=255) aCCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGTGCATGCAGAATCCTTGCTTAGGTTGCTAAATAAAGCGACGCCTAtt > 8:160080/1‑149 (MQ=255) cgccgGGACGCTCTGGATCGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGTGCATGCGGAATCCTTGCTTAGGTTGCTAAATAAAGCGACGCCTATTGt < 5:107726/149‑1 (MQ=255) gACGCTCTTGATTGCCTTGAAGTAGAGGTGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGTGCATGCAGTATCCTTGCTTAGGTTGCTAAATAAAGCGACGCCTATTGTAGACag < 8:237194/149‑1 (MQ=255) | TGCCCCGCTCAGTGCCAGGATGCCCAGCCGGCGCGGGTTGTTGCGCAGTTCACGCCACCAGCCGGGGTGTTTCCACACCAGTAGCAGCAGCGAGCCGAACAGTGCTGACCAGAGCACCCGGTGGACAATGATCTCCACCGCCGGGACGCTCTGGATTGCCTTGAAGTAGAGGGGGAAAAGGCCCCAGATGATGTAGGCGCTCAAGCCCAGTATGTACCCGCGACGCGGGTTTGCGGCGTGCATGCAGAATCCTTGCTTAGGTTGCTAAATAAAGCGACGCCTATTGTAGACAG > NC_002947/437045‑437337 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |