New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	594420 =	62 (1.050)	6 (0.110)	5/252	NT	8.7%	coding (342/513 nt)	PP_0505	hypothetical protein
	?	NC_002947	594448 =	66 (1.170)					coding (314/513 nt)	PP_0505	hypothetical protein

GCCAGCTCGCTGCTGGAAGCTTTGACCTGCATCTTTCCCTCTATCCAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGTCGAGGCTTTTTACCACTGGCGCGTCGGGCGCCTGCTGGCGCGCGGGAGGTGC  >  NC_002947/594304‑594590                                                                                                                                                  |                                                                                                                                               gCCAGCTCGCTGCTGGAAGCTTTGACCTGCATCTTTCCCTCTATCCAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGt                                                                                                                                             >  3:31197/1‑148 (MQ=255)    aGCTCGCTGCTGGAAGCTTTGACCTGCATCTTTCCCTCTATCCAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAgg                                                                                                                                         <  6:116144/149‑1 (MQ=255)         gctgctGGAAGCTTTGACCTGCATCTTTCCCTCTATCCAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGAc                                                                                                                                      <  4:31197/147‑1 (MQ=255)         gctgctGGAAGCTTTGACCTGCATCTTTCCCTCTATCCAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGAc                                                                                                                                      <  2:344554/147‑1 (MQ=255)           tgctgGAAGCTTTGACCTGCATCTTTCCCTCTATCCAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAgg                                                                                                                                         <  1:148155/142‑1 (MQ=255)             ctgGAAGCTTTGACCTGCATCTTTCCCTCTATCCAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACcagcag                                                                                                                                <  8:128634/149‑1 (MQ=255)             ctgGAAGCTTTGACCTGCATCTTTCCCTCTATCCAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACcagc                                                                                                                                  <  2:356714/147‑1 (MQ=255)                gAAGCTTTGACCTGCATCTTTCCCTCTATCCAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGAc                                                                                                                                      <  7:101424/140‑1 (MQ=255)                gAAGCTTTGACCTGCATCTTTCCCTCTATCCAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGAc                                                                                                                                      >  8:101424/1‑140 (MQ=255)                 aaaagcctcgacggccaacaggtcaaacttcccggctacatcgtgccactggaggtcagcgaagaaggccgcaccaccgaattcctgcttgtcccttactaTGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGa                                                                                                                              >  6:321345‑M1/102‑148 (MQ=255)                  aGCTTTGACCTGCATCTTTCCCTCTATCCAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAAtt                                                                                                                           <  4:158513/149‑1 (MQ=255)                    cTTTGACCTGCATCTTTCCCTCTATCCAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCg                                                                                                                         <  4:36354/149‑1 (MQ=255)                        gACCTGCATCTTTCCCTCTATCCAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCggtg                                                                                                                      <  8:114017/148‑1 (MQ=255)                          ccTGCATCTTTCCCTCTATCCAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATACACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGgtggtg                                                                                                                   <  8:337885/149‑1 (MQ=255)                           cTGCATCTTTCCCTCTATCCAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGc                                                                                                                  >  8:219245/1‑149 (MQ=255)                           cTGCATCTTTCCCTCTATCCAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTCGTGc                                                                                                                  >  3:236753/1‑149 (MQ=255)                            tGCATCTTTCCCTCTATCCAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCg                                                                                                                 >  5:32532/1‑149 (MQ=255)                               aTCTTTCCCTCTATCCAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCACCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGcc                                                                                                              <  6:369361/149‑1 (MQ=255)                                tCTTTCCCTCTATCCAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGGAAAGGAGCAGCAGGAATTCGGTGGTGCGGCct                                                                                                             >  4:9685/1‑149 (MQ=255)                                 cTTTCCCTCTATCCAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCg                                                                                                                         >  2:12713/1‑136 (MQ=255)                                 cTTTCCCTCTATCCAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCg                                                                                                                         <  1:12713/136‑1 (MQ=255)                                  tttCCCTCTATCCAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCcttc                                                                                                           >  2:262613/1‑149 (MQ=255)                                          tATCCAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCt                                                                                                     <  3:274795/147‑1 (MQ=255)                                          tATCCAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCt                                                                                                     <  1:262613/147‑1 (MQ=255)                                            tCCAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTCGTGCGGCCTTCTTCGCTGAc                                                                                                  <  4:236753/148‑1 (MQ=255)                                             ccAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCt                                                                                                >  1:263863/1‑149 (MQ=255)                                              cAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTc                                                                                               >  5:161013/1‑149 (MQ=255)                                                       tGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCTGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCAc                                                                                      >  5:173789/1‑149 (MQ=255)                                                           agagGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATg                                                                                  >  1:188674/1‑149 (MQ=255)                                                                     gACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTg                                                                                          <  3:210359/131‑1 (MQ=255)                                                                     gACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTg                                                                                          >  4:210359/1‑131 (MQ=255)                                                                       cgcgCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGt                                                                      <  6:161013/149‑1 (MQ=255)                                                                        gcgcACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGGATGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGt                                                                      >  1:76779/1‑149 (MQ=255)                                                                        gcgcACGCCCATCTCGATGAAAATATGCACGATCTGGTTAGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGATGtt                                                                     >  8:345525/1‑149 (MQ=255)                                                                         cgcACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGttt                                                                    <  7:219245/149‑1 (MQ=255)                                                                            aCGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGTTGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTTGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGAc                                                                 <  6:252938/149‑1 (MQ=255)                                                                            aCGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGAc                                                                 <  2:65474/149‑1 (MQ=255)                                                                            aCGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGAc                                                                 >  5:275373/1‑149 (MQ=255)                                                                              gCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCt                                                               <  6:275373/149‑1 (MQ=255)                                                                                ccATCTCGCTGAAACTATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGt                                                             <  8:317595/149‑1 (MQ=255)                                                                                ccATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGt                                                             >  3:320876/1‑149 (MQ=255)                                                                                 cATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGtt                                                            <  4:320876/149‑1 (MQ=255)                                                                                     tcGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGcc                                                        >  8:22757/1‑149 (MQ=255)                                                                                       gCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGt                                                      <  2:76779/149‑1 (MQ=255)                                                                                       gCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGt                                                      >  3:341067/1‑149 (MQ=255)                                                                                        cTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGTc                                                     >  2:35140/1‑149 (MQ=255)                                                                                         tGAAAATATGCACGATCTGGTTCGTCGT‑TGGCGGCGGCACTTGGATGCACGCGGCATAGTAAGGGACCAGCAGGAATTCGGTTTTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGa                                                                                    <  4:303533/117‑1 (MQ=255)                                                                                         tGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGTc                                                     >  7:342093/1‑148 (MQ=255)                                                                                         tGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGAACGAGACATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGAGGCACGa                                                                                    >  3:303533/1‑117 (MQ=255)                                                                                           aaaaTATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGTCg                                                    <  6:32532/147‑1 (MQ=255)                                                                                                   tcctgctggtcccttactatggcgcgtgcatccacgtgccgccgccaTAGTAAGGGACAAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGTCGAGGCtttt                                            >  6:321345‑M2/48‑148 (MQ=255)                                                                                                    aCGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGTCGAGGCTTTTTAc                                         >  6:331730/1‑149 (MQ=255)                                                                                                       aTCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGCCCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGTCGAGGCTTTTTACCAc                                      >  2:162669/1‑149 (MQ=255)                                                                                                           ggTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGTCGAGGCTTTTTACCACTGgc                                  >  7:174109/1‑149 (MQ=255)                                                                                                            gTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGAc                                                                 <  7:228317/117‑1 (MQ=255)                                                                                                            gTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGAc                                                                 >  8:228317/1‑117 (MQ=255)                                                                                                                ggcgg‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGTCGAGGCTTTTTACCACTGGCGCGt                              <  4:341067/148‑1 (MQ=255)                                                                                                                 gcgg‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGTCGAGGCTTTTTACCACTGGCGCGTCg                            >  2:285561/1‑149 (MQ=255)                                                                                                                  cgg‑TGGCTGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGTCGAGGCTTTTTACCACTGGCGCGTCgg                           <  6:173789/149‑1 (MQ=255)                                                                                                                  cgg‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGTCGa                                                   <  6:46426/125‑1 (MQ=255)                                                                                                                  cgg‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGTCGa                                                   >  5:46426/1‑125 (MQ=255)                                                                                                                      tggcgcgtgcatccacgtgccgccgccaTAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTa                                                                                <  1:175577‑M2/65‑1 (MQ=255)                                                                                                                      tggcgcgtgcatccacgtgccgccgccaTAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTa                                                                                >  2:175577‑M2/29‑93 (MQ=255)                                                                                                                      tggcgcgtgcatccacgtgccgccgccaTAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCgg                                                                           <  5:118264‑M2/70‑1 (MQ=255)                                                                                                                      tggcgcgtgcatccacgtgccgccgccaTAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCgg                                                                           >  6:118264‑M2/29‑98 (MQ=255)                                                                                                                               cACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTAGCTGACCTCCAGTGGCACTATGTAGCCGGGTAGTTTGACCTGTTGGACGTCGAGGCTTTTTACCACTGGCGCGTCGGGCGCCTGCTGgc               >  5:262326/1‑149 (MQ=255)                                                                                                                                aCGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTTGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGTCGAGGCTTTTTACCACTGGCGCGTCGGGCGCCTGCTGgc               <  6:223371/148‑1 (MQ=255)                                                                                                                                aCGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGTCGAGGCTTTTTACCACTGGCGCGTCGGGCGCCTGCTGgc               >  5:223371/1‑148 (MQ=255)                                                                                                                                 tccacgtgccgccgccaTAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGTCGAGGCTTTTTACCACTGGCGCGTCGGGCGCCTGCTGgcgc             <  5:321345‑M2/132‑1 (MQ=255)                                                                                                                                   tGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGTCGAGGCTTTTTACCACTGGCGCGTCGGGCGCCTGCTGgcgcgc           <  5:331730/149‑1 (MQ=255)                                                                                                                                      aTGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGTCGAGGCTTTTTACCACTGGCGCGTCGGGCGCCTGCTGGCGCGCggg        <  8:342093/149‑1 (MQ=255)                                                                                                                                       tGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGTCGAGGCTTTTTACCACTGGCGCGTCGGGCGCCTGCTGGCGCGCgg         >  6:275379/1‑147 (MQ=255)                                                                                                                                       tGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGTCGAGGCTTTTTACCACTGGCGCGTCGGGCGCCTGCTGGCGCGCGGGa       <  8:174109/149‑1 (MQ=255)                                                                                                                                       tGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGTCGAGGCTTTTTACCACTGGCGCGGCGGGCGCCTGCTGGCGCGCGGGa       <  5:48575/149‑1 (MQ=255)                                                                                                                                           cgcgCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGTCGAgg                                                 >  5:49816/1‑103 (MQ=255)                                                                                                                                           cgcgCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGTCGAgg                                                 <  6:49816/103‑1 (MQ=255)                                                                                                                                            gcgcCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGTCGAGGCTTTTTACCACTGGCGCGTCGGGCGCCTGCTGGCGCGCGGGAGGTGc  <  1:35140/149‑1 (MQ=255)                                                                                                                                            gcgcCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGATGGCCGTCGAGGCTTTTTACCACTGGCGCGTCGGGCGCCTGCTGGCGCGCGGGAGGTGc  <  6:180040/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                               GCCAGCTCGCTGCTGGAAGCTTTGACCTGCATCTTTCCCTCTATCCAATAGGGCTGGTAGAGGTCTTCGACGCGCACGCCCATCTCGCTGAAAATATGCACGATCTGGTTCGGCGG‑TGGCGGCGGCACGTGGATGCACGCGCCATAGTAAGGGACCAGCAGGAATTCGGTGGTGCGGCCTTCTTCGCTGACCTCCAGTGGCACGATGTAGCCGGGAAGTTTGACCTGTTGGCCGTCGAGGCTTTTTACCACTGGCGCGTCGGGCGCCTGCTGGCGCGCGGGAGGTGC  >  NC_002947/594304‑594590

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.