New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1016619	54 (0.920)	3 (0.050)	3/248	NT	5.4%	coding (487/825 nt)	PP_0876	AraC family transcriptional regulator
	?	NC_002947	= 1016646	54 (0.970)					coding (460/825 nt)	PP_0876	AraC family transcriptional regulator

GTTGAGCAGGTAGGAAATCTGGTTGCGGCTGTAGCCGCTGGCGTCGGCGACCTGTTGCAGGTCGAGCTCCGGGTCGAGGTAGGGGCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGACCCGCCAGATCAGCCCGTCCCTGACGGTGATCGCCTCGCTGGACTGGAACGCAACCAGGCC  >  NC_002947/1016500‑1016790                                                                                                                                                   |                                                                                                                                                 gTTGAGCAGGTAGGAAATCTGGTTGCGGCTGTAGCCGCTGGCGTCGGCGACCTGTTGCAGGTCGAGCTCCGGGTCGAGGTAGGGGCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAgc                                                                                                                                                <  7:49699‑M2/149‑3 (MQ=255)     aGCAGGTAGGAAATCTGGTTGCGGCTGTAGCCGCTGGCGTCGGCGACCTGTTGCAGGTCGAGCTCCGGGTCGAGGTAGGGGCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAgccca                                                                                                                                             >  2:2923‑M2/1‑143 (MQ=255)         ggTAGGAAATCTGGTTGCGGCTGTAGCCGCTGGCGTCGGCGACCTGTTGCAGGTCGAGCTCCGGGTCGAGGTAGGGGCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAggcgg                                                                                                                                        >  7:3856/1‑149 (MQ=255)             ggAAATCTGGTNNCGNCTGTAGCCGCTGGCGTCGGCGACCTGTTGCAGGTCGAGCTCCGGGTCGAGGTAGGGGCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCtg                                                                                                                                     <  8:49699/148‑1 (MQ=255)                      gTTGCGGCTGTAGCCGCTGGCGTCGGCGACCTGTTGCAGGTCGAGCTCCGGGTCGAGGTAGGGGCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCgg                                                                                                                              <  2:303869/146‑1 (MQ=255)                         gCGGCTGTAGCCGCTGGCGTCGGCGACCTGTTGCAGGTCGAGCTCCGGGTCGAGGTAGGGGCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGgcgc                                                                                                                         <  3:130176/148‑1 (MQ=255)                              tGTAGCCGCTGGCGTCGGCGACCTGTTGCAGGTCGAGCTCCGGGTCGAGGTAGGGGCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCg                                                                                                                   >  1:12296/1‑149 (MQ=255)                                         tcGTCGGCGACGTGTTGCAGGTGGAGCTGCGTGTCGAGGTAGGGGCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGt                                                                                                         <  8:257419/147‑1 (MQ=255)                                         gCGTCGGCGACCTGTTGCAGGTCGAGCTCCGGGTCGAGGTAGGGGCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTg                                                                                                        <  6:4541/149‑1 (MQ=255)                                         gCGTCGGCGACCTGTTGCAGGTCGAGCTCCGGGTCGAGGTAGGGGCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTg                                                                                                        >  5:4541/1‑149 (MQ=255)                                                  aCCTGTTGCAGGTCGAGCTCCGGGTCGAGGTAGGGGCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGcc                                                                                               >  1:237816/1‑149 (MQ=255)                                                      gTTGCAGGTCGAGCTCCGGGTCGAGGTAGGGGCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGTtggt                                                                                                                                   >  4:154897/1‑109 (MQ=255)                                                      gTTGCAGGTCGAGCTCCGGGTCGAGGTAGGGGCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGTtggt                                                                                                                                   <  3:154897/109‑1 (MQ=255)                                                          cAGGTCGAGCTCCGGGTCGAGGTAGGGGCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGAGCGCTGTTGGCGTGGCCTGTGCCGTTCTGGc                                                                                       <  5:226644/149‑1 (MQ=255)                                                             gTCGAGCTCCGGGTCGAGGTAGGGGCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGa                                                                                    >  5:105699/1‑149 (MQ=255)                                                             gTCGAGCTCCGGGTCGAGGTAGGGGCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAACCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGa                                                                                    >  4:153579/1‑149 (MQ=255)                                                                gAGCTCCGGGTCGAGGTAGGGGCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGAc                                                                                   >  2:126330/1‑147 (MQ=255)                                                                   cTCCGGGTCGAGGTAGGGGCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCg                                                                                                                   >  6:7400/1‑112 (MQ=255)                                                                   cTCCGGGTCGAGGTAGGGGCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCg                                                                                                                   <  5:7400/112‑1 (MQ=255)                                                                     ccGGGTCGAGGTAGGGGCGGTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGGCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTg                                                                            <  7:293007/149‑1 (MQ=255)                                                                         gTCGAGGTAGGGGCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCg                                                                         >  8:323388/1‑148 (MQ=255)                                                                          tCGAGGTAGGGGCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTa                                                                       >  3:63907/1‑149 (MQ=255)                                                                            gAGGTAGGGGCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTAt                                                                      <  4:49490/148‑1 (MQ=255)                                                                               ggaGGGGCGTTGACGCCGGAAGTAATGCCCCAGGTCCTGGGCCATGGGCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGt                                                                  <  4:197510/147‑1 (MQ=255)                                                                               gTAGGGGCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGt                                                                  <  7:323388/149‑1 (MQ=255)                                                                                tAGGGGCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGtt                                                                 <  1:126330/149‑1 (MQ=255)                                                                                  ggggCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGtt                                                                                            <  7:225725/120‑1 (MQ=255)                                                                                  ggggCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGtt                                                                                            >  8:225725/1‑120 (MQ=255)                                                                                  ggggCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGc                                                                          <  7:196059/138‑1 (MQ=255)                                                                                  ggggCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGc                                                                          >  8:196059/1‑138 (MQ=255)                                                                                  ggggCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGa                                                               <  2:237816/149‑1 (MQ=255)                                                                                   gggCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGAc                                                              >  4:143862/1‑149 (MQ=255)                                                                                     gCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGAccc                                                            >  4:125006/1‑149 (MQ=255)                                                                                     gCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGAccc                                                            <  3:153579/149‑1 (MQ=255)                                                                                       gTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGACCCGc                                                          <  2:12296/149‑1 (MQ=255)                                                                                        ttGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGACCCGcc                                                         <  4:63907/149‑1 (MQ=255)                                                                                            cGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGACCCGCCAGAt                                                     <  3:125006/149‑1 (MQ=255)                                                                                              ccGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGACCCGCCAGATCa                                                   <  3:263670/149‑1 (MQ=255)                                                                                                 gAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGAcc                                                                                                                    >  5:30022/1‑81 (MQ=255)                                                                                                 gAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGAcc                                                                                                                    <  6:30022/81‑1 (MQ=255)                                                                                                 gAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGACCCGCCAGATCAGcc                                                >  2:201236/1‑149 (MQ=255)                                                                                                     tAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGACCCGCCAGATCAGCCCGTc                                            <  8:3856/149‑1 (MQ=255)                                                                                                      aaTGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGACCCGCCAGATCAGCCCGTcc                                           >  5:76780/1‑149 (MQ=255)                                                                                                       aTGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGACCCGCCAGATCAGCCCGTccc                                          >  3:297428/1‑149 (MQ=255)                                                                                                       aTGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGACCCGCCAGATCAGCCCGTccc                                          >  6:47910/1‑149 (MQ=255)                                                                                                         gCTCCAGGTCCTCGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGACCCGCCAGATCAGCCCGTCCCt                                         >  7:156914/1‑148 (MQ=255)                                                                                                            ccAGGTCCTGGGCCATGGTCGACAACTGCAGAGGAGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGACCCGCCAGATCAGCACGTCCATGACg                                     >  6:38123/1‑149 (MQ=255)                                                                                                               ggTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAgcccaggacctggagcattacttccggcgtcaacgcccctacctcgacccggagctcgacctgcaacaggtcgccgacgccagcggctacagccgcaaccagatttcctacc                                  <  7:121127‑M2/149‑113 (MQ=255)                                                                                                                  ccTGGGCCATGGTCGACAACTGCCGAGGCGACAAgcccaggacctggagcattacttccggcgtcaacgcccctacctcgacccggagctcgacctgcaacaggtcgccgacgccagcggctacagccgcacccagatttcctacctgc                               <  2:308997‑M2/149‑116 (MQ=255)                                                                                                                     gggCCATGGTCGACAACTGCCGAGGCGACAAgcccaggacctggagcattacttccggcgtcaacgcccctacctcgccccggagctcgacctgcaacaggtcgccgacgccagcggctacagccgcaaccagatttcctacctgctc                             <  2:17869‑M2/148‑118 (MQ=255)                                                                                                                           tGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGACCCGCCAGATCAGCCCGTCCCTGACGGTGATCGCCTCGttg                      <  4:297428/149‑1 (MQ=255)                                                                                                                                   aaCTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGACCCGCCAGATCAGCCCGTcc                                           <  7:879/120‑1 (MQ=255)                                                                                                                                   aaCTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGACCCGCCAGATCAGCCCGTcc                                           >  8:879/1‑120 (MQ=255)                                                                                                                                   aaCTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGACCCGCCAGATCAGCCCGTCCCTGACGGTGATCGCCTCGCTGGACTGGaa              >  4:188123/1‑149 (MQ=255)                                                                                                                                     cTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGACCCGCCAGATCAGCCCGTCCCTGACGGTGATCGCCTCGCTGGACTGGAACg            >  6:210386/1‑149 (MQ=255)                                                                                                                                         cGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGACCCGCCAGATCAGCCCGTCCCTGACGGTGATCGCCTCGCTGGACTGGAACGCAAc        <  2:214875/149‑1 (MQ=255)                                                                                                                                         cGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGACCCGCCAGATCAGCCCGTCCCTGACGGTGATCGCCTCGCTGGACTGGAACGCAAc        <  6:105699/149‑1 (MQ=255)                                                                                                                                         cGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGACCCGCCAGATCAGCCCGTCCCTGACGGTGATCGCCTCGCTGGACTGGAACGCAAc        >  4:208866/1‑149 (MQ=255)                                                                                                                                          gAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGACCCGCCAGATCAGCCCGTCCCTGACGGTGATCGCCTCGCTGGCCTGGAACGCCAc        >  6:111782/1‑148 (MQ=255)                                                                                                                                          gAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGACCCGCCAGATCAGCCCGTCCCTGACGGTGATCGCCTCGCTGGACTGGAACGCAAc        >  3:157554/1‑148 (MQ=255)                                                                                                                                               gACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCTCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGACCCGCCAGATCAGCCCGTCCCTGACGGTGATCGCCTCGCTGGACTGGAACGCAACCAGGcc  <  3:208866/149‑1 (MQ=255)                                                                                                                                               gACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGACCCGCCAGATCAGCCCGTCCCTGACGGTGATCGCCTCGCTGGACTGGAACGCAACCAGGcc  >  6:39380/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                 GTTGAGCAGGTAGGAAATCTGGTTGCGGCTGTAGCCGCTGGCGTCGGCGACCTGTTGCAGGTCGAGCTCCGGGTCGAGGTAGGGGCGTTGACGCCGGAAGTAATGCTCCAGGTCCTGGGCCATGGTCGACAACTGCCGAGGCGACAAGCCCAGGCGGCTGGTGGCGGGGCGCGGACCGCTGTTGGCGTGGCCTGTGCCGTTCTGGCGGACCAGCGTGGCGTATTCGTTGACCCGCCAGATCAGCCCGTCCCTGACGGTGATCGCCTCGCTGGACTGGAACGCAACCAGGCC  >  NC_002947/1016500‑1016790

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.