New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1267027 =	45 (0.760)	3 (0.050)	3/254	NT	6.4%	coding (961/2442 nt)	quiP	acyl‑homoserine lactone acylase QuiP
	?	NC_002947	1267092 =	44 (0.770)					coding (896/2442 nt)	quiP	acyl‑homoserine lactone acylase QuiP

TAGCTCAGCTGACTGCCTTGGCGGCGCAGCTGCTCGAGGAACAGGTCCTGATTGTCGGCCATGACCGCGCTGCTGCTCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCT  >  NC_002947/1266945‑1267239                                                                                                                                                    |                                                                                                                                                    gccgcagcggcaagagccggcgggcctgcgacagccgcgccgcctgggccttgcgcccggtacaaatcaataccagcaagtaCCAGCTCGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTa                                                                                                                                                    >  2:102008‑M1/83‑149 (MQ=255)   gCTCAGCTGACTGCCTTGGCGGCGCAGCTGCTCGAGGAACAGGTCCTGATTGTCGGCCATGACCGCGCTGCTGCTCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACt                                                                                                                                                  >  6:338146/1‑149 (MQ=255)        gCTGACTGCCTTGGCGGCGCAGCTGCTCGAGGAACAGGTCCTGATTGTCGGCCATGACCGCGCTGCTGCTCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTg                                                                                                                                             <  8:302633/149‑1 (MQ=255)            aCTGCCTTGGCGGCGCAGCTGCTCGAGGAACAGGTCCTGATTGTCGGCCATGACCGCGCTGCTGCTCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTAt                                                                                                                                         >  8:191555/1‑149 (MQ=255)              tGCCTTGGCGGCGCAGCTGCTCGAGGAACAGGTCCTGATTGTCGGCCATGACCGCGCTGCTGCTCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTAtt                                                                                                                                        >  5:380544/1‑148 (MQ=255)                ccTTGGCGGCGCAGCTGCTCGAGGAACAGGTCCTGATTGTCGGCCATGACCGCGCTGCTGCTCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGAt                                                                                                                                     >  4:304555/1‑149 (MQ=255)                  ttGGCGGCGCAGCTGCTCGAGGAACAGGTCCTGATTGTCGGCCATGACCGCGCTGCTGCTCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGAttt                                                                                                                                   >  1:322770/1‑149 (MQ=255)                  ttGCCGCCGCAGCTGCTAGAGGAACACGTCCTGATTGTCGGCCATGACCGCGCTGCTGCTCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGGAAGGACAGGCCGGCAACCTGGAACTTGCTGGGATTGAgtt                                                                                                                                   >  8:32063/1‑149 (MQ=255)                    ggcggcGCAGCTGCTCGAGGAACAGGTCCTGATTGTCGGCCATGACCGCGCTGCTGCTCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGAttt                                                                                                                                   <  4:113756/147‑1 (MQ=255)                          gcAGCTGCTCGAGGAACAGGTCCTGATTGTCGGCCATGACCGCGCTGCTGCTCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCggg                                                                                                                           <  8:270660/149‑1 (MQ=255)                            aGCTGCTCGAGGAACAGGTCCTGATTGTCGGCCATGACCGCGCTGCTGCTCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGc                                                                                                                          >  7:45140/1‑148 (MQ=255)                                  tCGAGGAACAGGTCCTGATTGTCGGCCATGACCGCGCTGCTGCTCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGc                                                                                                                   >  8:142233/1‑149 (MQ=255)                                   cGAGGAACAGGTCCTGATTGTCGGCCATGACCGCGCTGCTGCTCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGcc                                                                                                                  >  1:90197/1‑149 (MQ=255)                                       gAACAGGTCCTGATTGTCGGCCATGACCGCGCTGCTGCTCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAgg                                                                                                              >  3:206934/1‑149 (MQ=255)                                               ccTGATTGTCGGCCATGACCGCGCTGCTGCTCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGgcggcgcgg                                                                                                      <  8:45140/149‑1 (MQ=255)                                                cTGATTGTCGGCCATGACCGCGCTGCTGCTCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGgcggcgcggc                                                                                                     >  6:140041/1‑149 (MQ=255)                                                cTGATTGTCGGCCATGACCGCGCTGCTGCTCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGgcggcg                                                                                                         >  4:208127/1‑145 (MQ=255)                                                cTGATTGTCGGCCATGACCGCGCTGCTGCTCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGgcggcg                                                                                                         <  3:208127/145‑1 (MQ=255)                                                 agcatGTCGGCCATGACCGCGCTGCTGCTCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCt                                                                                                    <  7:18821/145‑1 (MQ=255)                                                    ttGTCGGCCATGACCGCGCTGCTGCTCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTc                                                                                                 <  5:338146/149‑1 (MQ=255)                                                    ttGTCGGCCATGACCGCGCTGCTGCTCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTc                                                                                                 <  7:191555/149‑1 (MQ=255)                                                         ggCCATGACCGCGCTGCTGCTCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTg                                                                                             <  6:380544/148‑1 (MQ=255)                                                          gCCATGACCGCGCTGCTGCTCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGc                                                                                           >  7:214457/1‑149 (MQ=255)                                                                  cgcgCTGCTGCTCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGc                                                                                   >  7:34570/1‑149 (MQ=255)                                                                       tgctgctCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAggcgg                                                                                                           <  1:135581/120‑1 (MQ=255)                                                                       tgctgctCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAggcgg                                                                                                           >  2:135581/1‑120 (MQ=255)                                                                               cAGGCCAGATTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCgctgcg                                                                      >  3:191457/1‑149 (MQ=255)                                                                                 taccaggttgccggcctgtccttgccgggcctgccaattgtgctggccggctacaatggcgagctggTACTTGCTGGTATTGATTTGTACCGGGCGCAAGGCCCAGGCGGCGCGGCTGTCGCAGGCCCGCCGGCTCTTGCCgctgcggc                                                                    >  2:102008‑M2/68‑149 (MQ=255)                                                                                  gCCAGGTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCgctgcggct                                                                   >  7:337430/1‑149 (MQ=255)                                                                                    caggttgccggcctgtccttgccgggcctgccaattgtgctggccggctacaatggcaagctggTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCgctgcggctgc                                                                 <  8:18826‑M2/85‑1 (MQ=255)                                                                                    caggttgccggcctgtccttgccgggcctgccaattgtgctggccggctacaatggcaagctggTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCgctgcggctgc                                                                 >  7:18826‑M2/65‑149 (MQ=255)                                                                                          gCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCCAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGctgcgctgcg                                                           <  2:322770/149‑1 (MQ=255)                                                                                          gCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGTCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGgctgcgctgc                                                            <  7:32063/148‑1 (MQ=255)                                                                                          gCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGgctgcgctg                                                             <  5:140041/147‑1 (MQ=255)                                                                                          gCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGctgcgctgcg                                                           >  3:259397/1‑149 (MQ=255)                                                                                             aTTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGAc                                                        >  2:200441/1‑149 (MQ=255)                                                                                              ttGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGAcc                                                       <  1:200441/149‑1 (MQ=255)                                                                                                 tAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAg                                                    >  1:357658/1‑149 (MQ=255)                                                                                                   gCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAgg                                                   <  2:69762/148‑1 (MQ=255)                                                                                                      ggCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCgg                                                          <  2:132441/138‑1 (MQ=255)                                                                                                          aGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGtt                                           <  2:103836/149‑1 (MQ=255)                                                                                                            cacaATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGccccagggtc                                         >  7:195437/1‑142 (MQ=255)                                                                                                               aaTTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGGTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGGTGCGGACCCAGGGCCAGGTTGGCCg                                      >  8:267923/1‑149 (MQ=255)                                                                                                                     cAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCg                                >  5:374703/1‑149 (MQ=255)                                                                                                                      aGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCgg                               >  2:348092/1‑149 (MQ=255)                                                                                                                                  gACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCag                   <  2:90197/149‑1 (MQ=255)                                                                                                                                     aGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCaggtc                >  5:279216/1‑149 (MQ=255)                                                                                                                                         cGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCaggtcgagg            >  5:92246/1‑149 (MQ=255)                                                                                                                                          ggCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCaggtcgaggt           >  5:273427/1‑149 (MQ=255)                                                                                                                                           gCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCaggtcgaggtc          <  2:357658/149‑1 (MQ=255)                                                                                                                                               ccTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGc       >  2:179642/1‑148 (MQ=255)                                                                                                                                                ctggTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCa     <  6:92246‑M2/145‑1 (MQ=255)                                                                                                                                                   gTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCGGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCTGGCCGACCTCGACCTGCt  <  8:337430‑M2/148‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                    TAGCTCAGCTGACTGCCTTGGCGGCGCAGCTGCTCGAGGAACAGGTCCTGATTGTCGGCCATGACCGCGCTGCTGCTCCAGGCCAGCTTGCCATTGTAGCCGGCCAGCACAATTGGCAGGCCCGGCAAGGACAGGCCGGCAACCTGGTACTTGCTGGTATTGATTTGTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCT  >  NC_002947/1266945‑1267239

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.