New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 305262852 (0.880)4 (0.070) 4/254 NT 7.4% coding (1328/1899 nt) PP_2664 two‑component system sensor histidine kinase/response regulator
?NC_002947 = 3052652 50 (0.880)coding (1352/1899 nt) PP_2664 two‑component system sensor histidine kinase/response regulator

CTGGGGTGTCGGCGCCTGCGCGGTGGCGTGCGGATTGAAGTATGGGACAGCGGCATCGGCATTGCCGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAAGGCTCGGTGTTCGCTGTCGAGGTGCCGCTGAGCACCACTGCTCCCAAAGCCCAGCCGAGCCAGGTTATCTGCGA  >  NC_002947/3052507‑3052799
                                                                                                                                                 |                                                                                                                                                    
cTGGGGTGTCGGCGCCTGCGCGGTGGCGTGCGGATTGAAGTATGGGACAGCGGCATCGGCATTGCCGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTgg                                                                                                                                                    >  7:184674‑M2/1‑146 (MQ=255)
    ggTGTCGGCGCCTGCGCGGTGGCGTGCGGATTGAAGTATGGGACAGCGGCATCGGCATTGCCGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTg                                                                                                                                               <  3:337032/149‑1 (MQ=255)
     gtgtCGGCGCCTGCGCGGTGGCGTGCGGATTGAAGTATGGGACAGCGGCATCGGCATTGCCGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTgg                                                                                                                                              <  4:164140/149‑1 (MQ=255)
     gtgtCGGCGCCTGCGCGGTGGCGTGCGGATTGAAGTATGGGACAGCGGCATCGGCATTGCCGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTgg                                                                                                                                              <  3:150964/149‑1 (MQ=255)
          ggggcCTGCGCGGTGGCGTGCGGATTGATGTAGGGGCCCGCGGCTCCGGCATTGCCGAAGAACCCCTGCACCACATGTTCCTGTCGTTCAACCGGGGGCTTGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATc                                                                                                                                         <  1:272003/146‑1 (MQ=255)
          ggCGCCTGCGCGGTGGCGTGCGGATTGAAGTATGGGACAGCGGCATCGGCATTGCCGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATc                                                                                                                                         >  8:220903/1‑149 (MQ=255)
           gcgcCTGCGCGGTGGCGTGCGGATTGAAGTATGGGACAGCGGCATCGGCATTGCCGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCg                                                                                                                                        >  8:114021/1‑149 (MQ=255)
              ccTGCGCGGTGGCGTGCGGATTGAAGTATGGGACAGCGGCATCGGCATTGCCGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTgg                                                                                                                                    <  6:369878/149‑1 (MQ=255)
               cTGCGCGGTGGCGTGCGGATTGAAGTATGGGACAGCGGCATCGGCATTGCCGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGga                                                                                                                                   <  8:301091/149‑1 (MQ=255)
                  cgcgGTGGCGTGCGGATTGAAGTATGGGACAGCGGCATCGGCATTGCCGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGgaga                                                                                                                                 <  6:33228/148‑1 (MQ=255)
                           gTGCGGATTGAAGTATGGGACAGCGGCATCGGCATTGCCGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCgg                                                                                                                       >  1:166918/1‑149 (MQ=255)
                                 aTTGAAGTATGGGACAGCGGCATCGGCATTGCCGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCt                                                                                                                 >  4:42962/1‑149 (MQ=255)
                                    gAAGTATGGGACAGCGGCATCGGCATTGCCGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCg                                                                                                               <  3:102038/148‑1 (MQ=255)
                                          tGGGACAGCGGCATCGGCATTGCCGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTg                                                                                                                                     <  2:233296/120‑1 (MQ=255)
                                          tGGGACAGCGGCATCGGCATTGCCGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTg                                                                                                                                     >  1:233296/1‑120 (MQ=255)
                                          tGGGACAGCGGCATCGGCATTGCCGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCGTCGGCCAcc                                                                                                         <  4:192911/148‑1 (MQ=255)
                                          tGGGACAGCGGCATCGGCATTGCCGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCg                                                                                                        >  5:84255/1‑149 (MQ=255)
                                                    gcatcggcatTGCCGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGc                                                                                                                          <  3:173689/121‑1 (MQ=255)
                                                    gcatcggcatTGCCGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGc                                                                                                                          >  4:173689/1‑121 (MQ=255)
                                                    gcatcggcatTGCCGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCgcgtg                                                                                              <  6:234831/149‑1 (MQ=255)
                                                      atcggcatTGCCGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCgcgtgcg                                                                                            >  7:165801/1‑149 (MQ=255)
                                                               gCCGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCt                                                                                   >  5:343124/1‑149 (MQ=255)
                                                                 cGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTgg                                                                                 >  7:313049/1‑149 (MQ=255)
                                                                 cGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTgg                                                                                 <  5:165990/149‑1 (MQ=255)
                                                                 cGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTgg                                                                                 <  8:165801/149‑1 (MQ=255)
                                                                 cGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTgg                                                                                 >  7:339918/1‑149 (MQ=255)
                                                                  gaagaaCACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTggg                                                                                >  1:358004/1‑149 (MQ=255)
                                                                         acCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAAGGc                                                                         <  3:42962/149‑1 (MQ=255)
                                                                              cAAGACATGTTCCTGGAGTTGAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAAGGCTCg                                                                      <  3:54875/147‑1 (MQ=255)
                                                                                  tcATTTTCGTGGAGTGCACGCGTGGTCATGGGGAGCGGCGGGTGCAGGACCGTGGGCTGGGGCTGGGCCTGGCAAACGTGGAGAAGATCGCCGGGATCCTCGGGCAACGGATCCGCGTGCGTTCATGGCTGGGCTAACGCTCGGTGTTc                                                                <  1:315021/148‑1 (MQ=255)
                                                                                         ccTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAAGGCTCGGTGTTCGCTGTc                                                          <  2:358004/148‑1 (MQ=255)
                                                                                            ggAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAAGGCTCGGTGTTCGCTGTCGAgg                                                      >  5:334628/1‑149 (MQ=255)
                                                                                             gAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAAGGCTCGGTGTTCGCTGTCGAGGt                                                     >  1:121451/1‑149 (MQ=255)
                                                                                                     gCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAAGGCTCGGTGTTCGCTGTCGAGGTGCCGCTGa                                             >  4:244969/1‑149 (MQ=255)
                                                                                                     gCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAAGGCTCGGTGTTCGCTGTCGAGGTGCCGCTGa                                             <  6:247953/149‑1 (MQ=255)
                                                                                                     gCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCCGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAACGCTCGGTGTTCGCTGTCGAGGTGCCGCTGa                                             <  1:34246/149‑1 (MQ=255)
                                                                                                      cGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGATGGAGAAGATCGCCGGCATCCTCGGCCAc                                                                                                          <  1:215661/88‑1 (MQ=255)
                                                                                                      cGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCAc                                                                                                          >  2:215661/1‑87 (MQ=255)
                                                                                                         ggTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAAGGCTCGGTGTTCGCTGTCGAGGTGCCGCTGAGcac                                         <  7:220903/149‑1 (MQ=255)
                                                                                                           tGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAAGGCTCGGTGTTCGCTGTCGAGGTGCCGCTGAGcacca                                       <  2:166918/149‑1 (MQ=255)
                                                                                                             aTGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAAGGCTCGGTGTTCGCTGTCGAGGTGCCGCTGAGcaccac                                      <  6:334628/148‑1 (MQ=255)
                                                                                                                  cAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAAGGCTCGGTGTTCGCTGTCGAGGTGCCGCTGAGCACCACTGCTcc                                >  6:215837/1‑149 (MQ=255)
                                                                                                                  cAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAAGGCTCGGTGTTCGCTGTCGAGGTGCCGCTGAGCACCACTGCTcc                                >  6:278790/1‑149 (MQ=255)
                                                                                                                  cAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAAGGCTCGGTGTTCGCTGTCGAGGTGCCGCTGAGCACCACTGCTcc                                <  6:343124/149‑1 (MQ=255)
                                                                                                                   aGCGCCCGGACCAGGACCGTGGGCTGGGTCTgggcgctgcacatcaccccgcttgaactccaggaacatgtcttgcaggtgttcttcggcaatgccgatgccgct                                                                            >  5:273915‑M2/1‑31 (MQ=255)
                                                                                                                   aGCGCCCGGACCAGGACCGTGGGCTGGGTCTgggcgctgcacatcaccccgcttgaactccaggaacatgtcttgcaggtgttcttcggcaatgccgatgccgct                                                                            <  6:273915‑M2/105‑75 (MQ=255)
                                                                                                                   aGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAAGGCTCGGTGTTCGCTGTCGAGGTGCCGCTGAGCACCACTGCTccc                               <  5:215837/149‑1 (MQ=255)
                                                                                                                    gcgcCCGGACCAGGACCGTGGGCTGGGTCTgggcgctgcacatcaccccgcttgaactccaggaacatgtcttgcaggtgttcttcggcaatgccgatgccgctgtcccata                                                                    >  1:301322‑M2/1‑30 (MQ=255)
                                                                                                                    gcgcCCGGACCAGGACCGTGGGCTGGGTCTgggcgctgcacatcaccccgcttgaactccaggaacatgtcttgcaggtgttcttcggcaatgccgatgccgctgtcccata                                                                    <  2:301322‑M2/112‑83 (MQ=255)
                                                                                                                    gcgcCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAAGGCTCGGTGTTCGCTGTCGAGGTGCCGCTGAGCTCCCCTGATccc                               >  4:85464/1‑148 (MQ=255)
                                                                                                                      gcCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAAGGCTCGGTGTTCGCTGTCGAGGTGCCGCTGAGCACCACTGCTCCCaaa                            <  3:244969/149‑1 (MQ=255)
                                                                                                                           gACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAAGGCTCGGTGTTCGCTGTCGAGGTGCCGCTGAGCACCACTGCTCCCAAAGCCCa                       <  2:121451/149‑1 (MQ=255)
                                                                                                                                ggACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAAGGCTCGGTGTTCGCTGTCGAGGTGCCGCTGAGCACCACTGCTCCCAAAGCCCAGCCGa                  <  7:114021/149‑1 (MQ=255)
                                                                                                                                 gACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAAGGCTCGGTGTTCGCTGTCGAGGTGCCGCTGAGcacca                                       <  6:127669/127‑1 (MQ=255)
                                                                                                                                 gACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAAGGCTCGGTGTTCGCTGTCGAGGTGCCGCTGAGcacca                                       >  5:127669/1‑127 (MQ=255)
                                                                                                                                 gACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAAGGCTCGGTGTTCGCTGTCGAGGTGCCGCTGAGCACCACTGCTCCCAAAGCCCAGCCGAg                 >  3:192853/1‑149 (MQ=255)
                                                                                                                                  aCCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAAGGCTCGGTGTTCGCTGTCGAGGTGCCGCTGAGCACCACTGCTCCCAAAGCCCAGCCGAGc                <  4:192853/149‑1 (MQ=255)
                                                                                                                                     gTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAAGGCTCGGTGTTCGCTGTCGAGGTGCCGCTGAGCACCACTGCTCCCAAAGCCCAGCCGAGCCAg             <  6:84255/149‑1 (MQ=255)
                                                                                                                                                cTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAAGGCTCGGTGTTCGCTGTCGAGGTGCCGCTGAGCACCACTGCTCCCAAAGCCCAGCCGAGCCAGGTTATCTGCGa  <  8:313049/149‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
CTGGGGTGTCGGCGCCTGCGCGGTGGCGTGCGGATTGAAGTATGGGACAGCGGCATCGGCATTGCCGAAGAACACCTGCAAGACATGTTCCTGGAGTTCAAGCGGGGTGATGTGCAGCGCCCGGACCAGGACCGTGGGCTGGGTCTGGGCCTGGCAATCGTGGAGAAGATCGCCGGCATCCTCGGCCACCGGATCCGCGTGCGTTCATGGCTGGGCAAAGGCTCGGTGTTCGCTGTCGAGGTGCCGCTGAGCACCACTGCTCCCAAAGCCCAGCCGAGCCAGGTTATCTGCGA  >  NC_002947/3052507‑3052799

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.