New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3301817 =68 (1.150)7 (0.120) 6/252 NT 9.7% coding (166/1704 nt) glnS glutamine‑‑tRNA ligase
?NC_002947 3301856 = 65 (1.150)coding (205/1704 nt) glnS glutamine‑‑tRNA ligase

TGTCCCTGCGAACTTCCTGCGGCCGATCATCCAGGCCGACCTGGACTCGGGCAAGCACAGCAGCATCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCTGGGCTTCGAGTGGGGCGGCGACGTGCGTTACGCCTCCGACTACTTCGA  >  NC_002947/3301708‑3302004
                                                                                                                                                    |                                                                                                                                                     
cgaagcccagccatttgacatcgctctggatggcgtcgatgtactcctggtcttccttggccgggttggtatcgtcgaaacgcaggtggcagacgccgccgaattccttGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCa                                                                                                                                                       >  6:51153‑M1/110‑149 (MQ=255)
 gaagcccagccatttgacatcgctctggatggcgtcgatgtactcctggtcttccttggccgggttggtatcgtcgaaacgcaggtggcagacgccgccgaattccttGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCaa                                                                                                                                                      >  3:96457‑M1/109‑149 (MQ=255)
  tCCCTGCGAACTTCCTGCGGCCGATCATCCAGGCCGACCTGGACTCGGGCAAGCACAGCAGCATCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAg                                                                                                                                                     >  3:362247/1‑149 (MQ=255)
  aagcccagccatttgacatcgctctggatggcgtcgatgtactcctggtcttccttggccgggttggtatcgtcgaaacgcaggtggcagacgccgccgaattccttGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAg                                                                                                                                                     >  6:140512‑M1/108‑149 (MQ=255)
      tGCGAACTTCCTGCGGCCGATCATCCAGGCCGACCTGGACTCGGGCAAGCACAGCAGCATCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAAt                                                                                                                                                >  4:198920/1‑149 (MQ=255)
        cGAACTTCCTGCGGCCGATCATCCAGGCCGACCTGGACTCTGGCAAGCACAGCAGCATCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGGCAACTTCGGCCTGGCCAAGGAATTc                                                                                                                                              <  5:94376/149‑1 (MQ=255)
        cGAACTTCCTGCGGCCGATCATCCAGGCCGACCTGGACTCGGGCAAGCACAGCAGCATCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTc                                                                                                                                              <  3:198920/149‑1 (MQ=255)
           aCTTCCTGCGGCCGATCATCCAGGCCGACCTGGACTCGGGCAAGCACAGCAGCATCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTcggc                                                                                                                                           <  8:272042/149‑1 (MQ=255)
             ttCCTGCGGCCGATCATCCAGGCCGACCTGGACTCGGGCAAGCACAGCAGCATCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTcggcgg                                                                                                                                         >  2:135307/1‑149 (MQ=255)
                       cGATCATCCAGGCCGACCTGGACTCGGGCAAGCACAGCAGCATCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCAc                                                                                                                               <  3:363035/149‑1 (MQ=255)
                        gATCATCCAGGCCGACCTGGACTCGGGCAAGCACAGCAGCATCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCAcc                                                                                                                              >  5:216567/1‑149 (MQ=255)
                            atcCAGGCCGACCTGGACTCGGGCAAGCACAGCAGCATCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGc                                                                                                                           <  2:136994/148‑1 (MQ=255)
                             tcCAGGCCGACCTGGACTCGGGCAAGCACAGCAGCATCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGt                                                                                                                         >  6:69141/1‑149 (MQ=255)
                                          tgACTCGGGCAAGCACAGCAGCATCGTCAGCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATAcc                                                                                                             >  3:141489/2‑148 (MQ=255)
                                          ggACTCGGGCAAGCACAGCAGCATCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATAcc                                                                                                             >  8:321788/1‑148 (MQ=255)
                                            aCTCGGGCAAGCACAGCAGCATCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGAt                                                                                                                >  7:247392/1‑143 (MQ=255)
                                            aCTCGGGCAAGCACAGCAGCATCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGAt                                                                                                                <  8:247392/143‑1 (MQ=255)
                                                gggCAAGCACAGCAGCATCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATTGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCgg                                                                                                      >  2:233628/1‑149 (MQ=255)
                                                    aaGCACAGCAGCATCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGcc                                                                                                    >  3:152954/1‑147 (MQ=255)
                                                    aaGCACAGCAGCATCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCaa                                                                                                  <  4:51723/149‑1 (MQ=255)
                                                      gCACAGCAGCATCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGCAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCTACCCGGCCAAg                                                                                                 <  1:91964/149‑1 (MQ=255)
                                                        acaGCAGCATCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAgg                                                                                                >  1:366973/1‑147 (MQ=255)
                                                           gcagcaTCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGAc                                                                                           <  5:133542/149‑1 (MQ=255)
                                                            cagcaTCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGAc                                                                                           >  2:189466/1‑148 (MQ=255)
                                                              gcaTCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAg                                                                                        <  2:183550/149‑1 (MQ=255)
                                                              gcaTCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAg                                                                                        >  1:183550/1‑149 (MQ=255)
                                                               caTCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCa                                                                                         >  5:112799/1‑147 (MQ=255)
                                                               caTCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCa                                                                                         <  6:112799/147‑1 (MQ=255)
                                                               caTCGTCACCCGTTTCCCGCCGGAGCCCAAGGGTTACCTGCACATCGGCCACGCCAACTCGATCTCCCTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAg                                                                                        >  1:11840/1‑148 (MQ=255)
                                                                aTCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAAc                                                                                                          <  3:274902/129‑1 (MQ=255)
                                                                aTCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAAc                                                                                                          >  4:274902/1‑129 (MQ=255)
                                                                aTCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGa                                                                                      >  4:290266/1‑149 (MQ=255)
                                                                  cGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAg                                                                                     >  1:202745/1‑148 (MQ=255)
                                                                   gTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGt                                                                                    <  2:366973/148‑1 (MQ=255)
                                                                      atccGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACAt                                                                                <  4:141489/147‑1 (MQ=255)
                                                                          gTTTCCCGCCGTAGCCCAATGGTTACCTCCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGTAATTCGGCGGCGTCTGCCACCTGCGTTTCGACTATACCTACCCGGCCAAGGAAGACCAGGAGTACATCGAc                                                                            <  1:226946/149‑1 (MQ=255)
                                                                              cccGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGcc                                                                         <  5:69141/148‑1 (MQ=255)
                                                                               ccgccgGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCAt                                                                       <  1:135307/149‑1 (MQ=255)
                                                                                cgccgGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATc                                                                      <  3:290266/149‑1 (MQ=255)
                                                                                 gccgGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATc                                                                      >  1:109406/1‑148 (MQ=255)
                                                                                  ccgGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCa                                                                    <  8:258724/149‑1 (MQ=255)
                                                                                      aGCCCAATCGTTACCTGCACATCGGCCACGCCAAGGCGATCTGCGTCAACTGCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGc                                                                <  6:178011/149‑1 (MQ=255)
                                                                                         ccAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCCGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGCCGTACATCGACGCCATCCCGAGGGAt                                                             >  6:315606/1‑149 (MQ=255)
                                                                                          cAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTcga                                                                                                                    <  2:247687/93‑1 (MQ=255)
                                                                                          cAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTcga                                                                                                                    >  1:247687/1‑93 (MQ=255)
                                                                                          cAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAg                                                                                        <  2:135938/121‑1 (MQ=255)
                                                                                          cAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAg                                                                                        >  1:135938/1‑121 (MQ=255)
                                                                                          cAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATg                                                            >  5:176950/1‑149 (MQ=255)
                                                                                            aTGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTc                                                          <  4:152954/149‑1 (MQ=255)
                                                                                                ttACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAAt                                                      <  7:321788/149‑1 (MQ=255)
                                                                                                   ccTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATgg                                                    <  2:202745/148‑1 (MQ=255)
                                                                                                     tGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAgg                                                                                                >  8:262364/1‑102 (MQ=255)
                                                                                                     tGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAgg                                                                                                <  7:262364/102‑1 (MQ=255)
                                                                                                     tGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGAc                                                                            <  4:37704/122‑1 (MQ=255)
                                                                                                     tGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGAc                                                                            >  3:37704/1‑122 (MQ=255)
                                                                                                      gCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCTgg                                                >  6:222379/1‑149 (MQ=255)
                                                                                                       cacaTCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCaaa                                                       <  5:51/141‑1 (MQ=255)
                                                                                                       cacaTCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCaaa                                                       >  6:51/1‑141 (MQ=255)
                                                                                                          cttggccaggccgaagttgacgcagatcgacttggcgtggccAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCTGGGCtt                                            >  6:140512‑M2/43‑149 (MQ=255)
                                                                                                           ttggccaggccgaagttgacgcagatcgacttggcgtggccAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCTGGGCTTc                                           >  3:96457‑M2/42‑149 (MQ=255)
                                                                                                            tggccaggccgaagttgacgcagatcgacttggcgtggccAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCTGGGCTTCg                                          >  6:51153‑M2/41‑149 (MQ=255)
                                                                                                             GGCCACGCGAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGTCGATACCAACCCGTCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCTGGGCTTCGa                                         >  6:216567‑M1/1‑149 (MQ=255)
                                                                                                             GGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCTGGGCTTCGa                                         >  8:167915‑M1/1‑149 (MQ=255)
                                                                                                             GGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCTGGGCTTCGa                                         >  4:362247‑M1/1‑149 (MQ=255)
                                                                                                              GCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCTGGGCTTCGAg                                        >  6:176950‑M1/1‑149 (MQ=255)
                                                                                                               ccaggccgaagttgccgcagatcgacttggcgtggccAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCTGGGCTTCGAGt                                       >  5:375452‑M2/38‑149 (MQ=255)
                                                                                                               ccaggccgaagttgacgcagatcgacttggcgtggccAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCt                                                  >  5:99202‑M2/38‑138 (MQ=255)
                                                                                                               ccaggccgaagttgacgcagatcgacttggcgtggccAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCt                                                  <  6:99202‑M2/101‑1 (MQ=255)
                                                                                                                CACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCTGGGCTTCGAGTg                                      >  1:189466‑M1/1‑149 (MQ=255)
                                                                                                                     cAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCTGGGCTTCGAGTGGggcg                                 >  2:228536/1‑149 (MQ=255)
                                                                                                                      aaGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCTGGGCTTCGAGTGGggcgg                                >  3:328800/1‑149 (MQ=255)
                                                                                                                        gTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCTGGGCTTCGAGTGGggcggc                               >  3:114129/1‑148 (MQ=255)
                                                                                                                             tCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAg                                                                                     <  6:221651/89‑1 (MQ=255)
                                                                                                                             tCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAg                                                                                     >  5:221651/1‑89 (MQ=255)
                                                                                                                                gCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCTGGGCTTCGAGTGGGGCGGCGACGTGCGt                      >  5:357162/1‑149 (MQ=255)
                                                                                                                                cagatcgacttggcgtggccAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCTGGGCTTCGAGTGGGGCGGTGACGTGCGt                      <  5:51153‑M2/129‑1 (MQ=255)
                                                                                                                                 cGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCTGGGCTTCGAGTGGGGCGGCGACGTg                         <  1:228536/145‑1 (MQ=255)
                                                                                                                                     aaCTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACAt                                                                                >  6:219870/1‑86 (MQ=255)
                                                                                                                                     aaCTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACAt                                                                                <  5:219870/86‑1 (MQ=255)
                                                                                                                                     aaCTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCTGGGCTTCGAGTGGGGCGGCGACGTGCGTTACGc                 <  1:233628/149‑1 (MQ=255)
                                                                                                                                       cTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCTGGGCTTCGAGTGGGGCGGCGACGTGCGTTACGCCt               <  6:357162/149‑1 (MQ=255)
                                                                                                                                                 gccAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCTGGGCTTCGAGTGGGGCGGCGACGTGCGTTACGCCTCCGACTACtt     <  5:222379‑M2/146‑1 (MQ=255)
                                                                                                                                                  ccAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCTGGGCTTCGAGTGGGGCGGCGACGTGCGTTACGCCTCCGACTACTTc    <  5:152427‑M2/147‑1 (MQ=255)
                                                                                                                                                   cAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAg                                                                                        >  1:37561‑M2/2‑64 (MQ=255)
                                                                                                                                                   cAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAg                                                                                        <  2:37561‑M2/63‑1 (MQ=255)
                                                                                                                                                   cAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCTGGGCTTCGAGTGGGGCGGCGACGTGCGTTACGCCTCCGACTACTTc    >  5:95106‑M2/2‑148 (MQ=255)
                                                                                                                                                    aaGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCTGGGCTTCGAGTGGGGCGGCGACGTGCGTTACGCCTCCGACTACTTCGa  >  2:258175/1‑149 (MQ=255)
                                                                                                                                                    aaGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCTGGGCTTCGAGTGGGGCGGCGACGTGCGTTACGCCTCCGACTACTTCGa  >  3:26347/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
TGTCCCTGCGAACTTCCTGCGGCCGATCATCCAGGCCGACCTGGACTCGGGCAAGCACAGCAGCATCGTCACCCGTTTCCCGCCGGAGCCCAATGGTTACCTGCACATCGGCCACGCCAAGTCGATCTGCGTCAACTTCGGCCTGGCCAAGGAATTCGGCGGCGTCTGCCACCTGCGTTTCGACGATACCAACCCGGCCAAGGAAGACCAGGAGTACATCGACGCCATCCAGAGCGATGTCAAATGGCTGGGCTTCGAGTGGGGCGGCGACGTGCGTTACGCCTCCGACTACTTCGA  >  NC_002947/3301708‑3302004

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.