| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_002947 | 3,788,210 | Δ115 bp | coding (311‑425/1392 nt) | PP_3350 ← | hypothetical protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_002947 | 3788210 | 3788324 | 115 | 27 [0] | [0] 26 | PP_3350 | hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3788209 | 0 (0.000) | 25 (0.760) | 23/284 | 0.5 | 100% | coding (426/1392 nt) | PP_3350 | hypothetical protein |
| ? | NC_002947 | 3788325 = | 0 (0.000) | coding (310/1392 nt) | PP_3350 | hypothetical protein | |||||
GAAATCGACGAAGGCCTGTCGCACTTCATTGCGGCTTTCATCATTGGGCGAGTACAAGTCCTTGCCAAAGGCACGGGTATTCTCGACCTGGACGAAGGTACGCACGGCATCGTCGAACAGGTGCAGGTCGGCATGGGCCTGCAGCCGTTGCTGCAGATAGGAATCGTCGTTCAGCCCGCGCAGGCCAAAGAAGGGTTTGTCCGAAGCATCGGCCCGGTAGCGGGCCTCAGCCCCGAGTTGCAGCCAGGCCGACTCTGACAGCCGATGGTAGCGCAGGCCATCGAAAGG > NC_002947/3788182‑3788469 | cgaagctcaggcggatgttcggcgcgtcgcggtaggtgaccaacacctggtcgccgaagcccatctcctggcgacctacgcgtgtggtatagcgcccggcggcgaaatcgtggttgaaatcgacgaaggcctgtcgcacttcaGCCGt < 4:56428‑M2/5‑1 (MQ=255) tcaggcggatgttcggcgcgtcgcggtaggtgaccaacacctggtcgccgaagcccatctcctggcgacctacgcgtgtggtatagcgcccggcggcgaaatcgtggttgaaatcgacgacggcctgtcgcacttcaGCCGTtgct > 7:24230‑M2/138‑146 (MQ=255) tcaggcggatgttcggcgcgtcgcggtaggtgaccaacacctggtcgccgaagcccatctcctggcgacctacgcgtgtggtatagcgcccggcggcgaaatcgtggttgaaatcgacaaaggcctgtctcacttaaGCCGTtgctgc < 6:173080‑M2/11‑1 (MQ=255) gcgtcgcggtaggtgaccaacacctggtcgccgaagcccatctcctggcgacctacgcgtgtggtatagcgcccggcggcgaaatcgtggttgaaatcgacgaaggcctgtcgcacttcaGCCGTTGCTGCAGATAGGAATCGTCGtt < 6:10427‑M2/28‑1 (MQ=255) caacacctggtcgccgaagcccatctcctggcgacctacgcgtgtggtatagcgcccggcggcgaaatcgtggttgaaatcgacgaaggcctgtcgcacttcaGCCGTTGCTGCAGATAGGAATCGTCGTTCAGCCCGCGCAGGcc > 6:164303‑M2/104‑146 (MQ=255) ctggtcgccgaagcccatctcctggcgccctacgcgtgtggtatagcgcccggcggcgaaatcgtggttgaaatcgacgaaggcctgtcgcacttcaGCCGTTGCTGCAGATAGGAATCGTCGTTCAGCCCGCGCAGGCCAAAGAAgg > 4:130237‑M2/98‑148 (MQ=255) tggtcgccgaagcccatctcctggcgacctacgcgtgtggtatagcgcccggcggcgaaatcgtggttgaaatcgacgaaggcctgtcgcacttcaGCCGTTGCTGCAGATAGGAATCGTCGTTCAGCCCGCGCAGGCCAAAGAAggg > 7:78189‑M2/97‑148 (MQ=255) tggtcgccgaagcccatctcctggcgacctacgcgtgtggtatagcgcccggcggcgaaatcgtggttgaaatcgacgaaggcctgtcgcacttcaGCCGTTGCTGCAGATAGGAATCGTCGTTCAGCCCGCGCAGGCCAAAGAAggg > 7:80492‑M2/97‑148 (MQ=255) cgaagcccatctcctggcgacctacgcgtgtggtatagcgcccggcggctaaatcgtggttgaaatcgacgaaggcctgtcgcacttcaGCCGTTGCTGCAGATAGGACTCGTCGTTCAGCCCGCGCAGGCCAAAGAAGGGTTTGTcc < 6:162560‑M2/59‑1 (MQ=255) atctcctggcgacctacgcgtgtggtatagcgcccggcggcgaaatcgtggttgaaatcgacgaaggcctgtcgcacttcaGCCGTTGCTGCAGATAGGAATCGTCGTTCAGCCCGCGCAGGCCAAAGAAGGGTTTGTCCGAAGCATc > 3:179407‑M2/82‑148 (MQ=255) gcgacctacgcgtgtggtatagcgcccggcggcgaaatcgtggttgaaatcgacgaaggcctgtcgcacttcaGCCGTTGCTGCAGATAGGAATCGTCGTTCAGCCCGCGCAGGCCAAAGAAGGGTTTGTCCGAAGCATCGGCCCg > 6:66885‑M2/74‑146 (MQ=255) tacgcgtgtggtatagcgcccggcggcgaaatcgtggttgaaatcgacgaaggcctgtcgcacttcaGCCGTTGCTGCAGATAGGAATCGTCGTTCAGCCCGCGCAGGCCAAAGAAGGGGTTGTCCGAAGCATCGGCCCGGTAGCggg > 1:191987‑M2/68‑148 (MQ=255) gtgtggtatagcgcccggcggcgaaatcgtggttgaaatcgacgaaggcctgtcgcacttcaGCCGTTGCTGCAGATAGGAATCGTCGTTCAGCCCGCGCAGGCCAAAGAAGGGTTTGTCCGAAGCATCGGCCCGGTAGCGGGCCTCa > 3:171017‑M2/63‑148 (MQ=255) gtgtggtatagcgcccggcggcgaaatcgtggttgaaatcgacgaaggcctgtcgcacttcaGCCGTTGCTGCAGATAGGAATCGTCGTTCAGCCCGCGCAGGCCAAAGAAGGGTTTGTCCGAAGCATCGGCCCGGTAGCGGGCCTCa < 2:191987‑M2/86‑1 (MQ=255) atagcgcccggcggcgaaatcgtggttgaaatcgacgaaggcctgtcgcacttcaGCCGTTGCTGCAGATAGGAATCGTCGTTCAGCCCGCGCAGGCCAAAGAAGGGTTTGTCCGAAGCATCGGCCCGGTAGCGGGCCTCAGCCCCGa < 6:159143‑M2/93‑1 (MQ=255) cgcccggcggcgaaatcggggttgaaatcgacgaaggcctgtcgcacttcaGCCGTTGCTGCAGATAGGAATCGTCGTTCAGCCCGCGCAGGCCAAAGAAGGGGTTGTCCGAAGCATCGGCCCGGTAGCGGGCCTCAGCCCCGAGtt < 4:130310‑M2/96‑1 (MQ=255) gcccggcggcgaaatcgtggttgaaatcgacgaaggcctgtcgcacttcaGCCGTTGCTGCAGATAGGAATCGTCGTTCAGCCCGCGCAGGCCAAAGAAGGGTTTGTCCGAAGCATCGGCCCGGTAGCGGGCCTCAGCCCCGAGtt > 5:102364‑M2/51‑146 (MQ=255) gaaatcgtggttgaaatcgacgaaggcctgtcgcacttcaGCCGTTGCTGCAGATAGGAATCGTCGTTCAGCCCGCGCAGGCCAAAGAAGGGTTTGTCCGAAGCATCGGc > 6:160090‑M2/41‑110 (MQ=255) aaatcgtggttgaaatcgacgaaggcctgtcgcacttcaGCCGTTGCTGCAGATAGGAATCGTCGTTCAGCCCGCGCAGGCCAAAGAAGGGTTTGTCCGAAGCATCGGcc < 5:160090‑M2/71‑1 (MQ=255) ttgaaatcgacgaaggcctgtcgcacttcaGCCGTTGCTGCAGATAGGAATCGTCGTTCAGCCCGCGCAGGCCAAAGAAGGGTTTGTCCGAAGCATCGGCCCGGTAGCGGGCCTCAGCCCCGAGTTGCAGCCAGGCCGACTCTGACa < 4:179407‑M2/117‑1 (MQ=255) aatcgacgaaggcctgtcgcacttcaGCCGTTGCTGCAGATAGGAATCGTCGTTCAGCCCGCGCAGGCCAAAGAAGGGTTTGTCCGAAGCATCGGCCCGGTAGCGGGCCTCAGCCCCGAGTTGCAGCCAGGCCGACTCTGACAGCCGa > 1:39336‑M2/27‑148 (MQ=255) acgaaggcctgtcgcacttcaGCCGTTGCTGCAGATAGGAATCGTCGTTCAGCCCGCGCAGGCCAAAGAAGGGTTTGTCCGAAGCATCGGCCCGGTAGCGGGCCTCAGCCCCGAGTTGCAGCCAGGCCGACTCTGACAGCCGATGGTa < 6:102364‑M2/127‑1 (MQ=255) acgaaggcctgtcgcacttcaGCCGTTGCTGCAGATAGGAATCGTCGTTCAGCCCGCGCAGGCCAAAGAAGGGTTTGTCCGAAGCATCGGCCCGGTAGCGGGCCTCAGCCCCGAGTTGCAGCCAGGCCGACTCTGACAGCCGATGGTa < 5:66885‑M2/127‑1 (MQ=255) gcctgtcgcacttcaGCCGTTGCTGCAGATAGGAATCGTCGTTCAGCCCGCGCAGGCCAAAGAAGGGTGTGTCCGAAGCATCGGCCCGGTGGCGGGCCTCAGCCCCGAGTTGCAGCCAGGCCGACTCTGACAGCCGATGGTAGCGCAg < 8:51863‑M2/133‑1 (MQ=255) tcaGCCGTTGCTGCAGATAGGAATCGTCGTTCAGCCCGCGCAGGCCAAAGAAGGGTTTGTCCGAAGCATCGGCCCGGTAGCGGGCCTCAGCCCCGAGTTGCAGCCAGGCCGACTCTGACAGCCGATGGTAGCGCAGGCCATCGAAAgg < 8:80492‑M2/145‑1 (MQ=255) aGCCTTTGCTGCAGATAGGAATCGTCGTTCAGCCCGCGCAGGCCAAAGAAGGGTTTGTCCGAAGCATCGGCCCGGTAGCGGGCCTCAGCCCCGAGTTGCAGCCAGGCCGACTCTGACAGCCGATGGTAGCGCAGGCCATCGAAAgg < 8:78189‑M2/145‑1 (MQ=255) | GAAATCGACGAAGGCCTGTCGCACTTCATTGCGGCTTTCATCATTGGGCGAGTACAAGTCCTTGCCAAAGGCACGGGTATTCTCGACCTGGACGAAGGTACGCACGGCATCGTCGAACAGGTGCAGGTCGGCATGGGCCTGCAGCCGTTGCTGCAGATAGGAATCGTCGTTCAGCCCGCGCAGGCCAAAGAAGGGTTTGTCCGAAGCATCGGCCCGGTAGCGGGCCTCAGCCCCGAGTTGCAGCCAGGCCGACTCTGACAGCCGATGGTAGCGCAGGCCATCGAAAGG > NC_002947/3788182‑3788469 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |