New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 8676546 (0.780)6 (0.120) 6/224 NT 13.2% intergenic (‑48/+97) PP_0075/PP_0076 choline sulfate transporter/choline betaine‑binding protein
?NC_002947 = 86824 39 (0.750)intergenic (‑107/+38) PP_0075/PP_0076 choline sulfate transporter/choline betaine‑binding protein

GGGCGAGGATGGCGCCGCTCAGGCCTACCAGCAGGTCCTGGCGCAGGCTGCGGCCCGATTGGCGGGGAAGCCAGGTGAGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/86609‑86765
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctgtgggagcgggcGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGCTTGGCGACCCCTTAAGGATTGTGGATAACCCATGCATCGCCTCTCTTTACTGCTGCCCTTCCTCACCTG  <  NC_002947/86824‑86680
                                                                                                                                                                                                                                                                                                              
GGGCGAGGATGGCGCCGCTCAGGCCTACCAGCAGGTCCTGGCGCAGGCTGCGGCCCGATTGGCGGGGAAGCCAGGTGAGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGG                                                                                                                                                           <  7:104816/149‑1
 GGCGAGGATGGCGCCGCTCAGGCCTACCAGCAGGTCCTGGCGCAGGCTGCGGCCCGATTGGCGGGGAAGCCAGGTGAGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGG                                                                                                                                                          <  7:5869/149‑1
    GAGGATGGCGCCGCTCAGGCCTACCAGCAGGTCCTGGCGCAGGCTGCGGCCCGATTGGCGGGGAAGCCAGGTGAGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGC                                                                                                                                                       <  4:126721/149‑1
                              GCAGGTCCTGGCGCAGGCTGCGGCCCGATTGGCGGGGAAGCCAGGTGAGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGT                                                                                                                                                             <  2:251710/117‑1
                              GCAGGTCCTGGCGCAGGCTGCGGCCCGATTGGCGGGGAAGCCAGGTGAGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGT                                                                                                                                                             >  1:251710/1‑117
                                                      CCGATTGGCGGGGAAGCCAGGTGAGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGG                                                                                                                                                     >  3:340319/1‑101
                                                      CCGATTGGCGGGGAAGCCAGGTGAGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGG                                                                                                                                                     <  4:340319/101‑1
                                                                               GAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCA                                                                             >  8:350148/1‑148
                                                                               GAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCA                                                                             <  7:350148/148‑1
                                                                                           TAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAA‑CCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGCTTGGCGAC                                                               >  5:196924/1‑149
                                                                                                  AGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGC                                                                                              >  5:300338/1‑112
                                                                                                  AGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGC                                                                                              <  6:300338/112‑1
                                                                                                            TGGGTTATCCACAATCCTTAAGGGGTCGCCAA‑CCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGCTTGGCGACCCCTTAAGGATTGTGGA                                              <  6:196924/149‑1
                                                                                                                                              CCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGCTTGGCGACCCCTTAAGGATTGTGGATAACCCATGCATCGCCTCTC                          <  4:71239/136‑1
                                                                                                                                              CCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGCTTGGCGACCCCTTAAGGATTGTGGATAACCCATGCATCGCCTCTC                          >  3:71239/1‑136
                                                                                                                                                    GGACCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCCTGCCCGATCCCACAGGGCTTGGCGCCCCATGAAGGATTGTGTGTAACCCAGGCATCGCCTCGCTTTCATGCAGCCCgtgcg        >  6:145/1‑143
                                                                                                                                                         GGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGCTTGGCGACCCCTTAAGGATTGTGGATAACCCATGCATCGCCTCTCTTTACTGCTGCCCTTCCTCACCTG  <  2:122993/149‑1
                                                                                                                                                            CGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGCTTGGCGACCCCTTAAGGATTGTGGATAACCCATGC                                    >  4:226762/1‑112
                                                                                                                                                            CGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGCTTGGCGACCCCTTAAGGATTGTGGATAACCCATGC                                    <  3:226762/112‑1
                                                                                                                                                                                                                                                                                                              
GGGCGAGGATGGCGCCGCTCAGGCCTACCAGCAGGTCCTGGCGCAGGCTGCGGCCCGATTGGCGGGGAAGCCAGGTGAGGAAGGGCAGCAGTAAAGAGAGGCGATGCATGGGTTATCCACAATCCTTAAGGGGTCGCCAAGCCCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/86609‑86765
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctgtgggagcgggcGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGCTTGGCGACCCCTTAAGGATTGTGGATAACCCATGCATCGCCTCTCTTTACTGCTGCCCTTCCTCACCTG  <  NC_002947/86824‑86680

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.