New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 105259	45 (0.760)	5 (0.090)	5/240	NT	10.5%	coding (53/720 nt)	cynT	carbonic anhydrase
	?	NC_002947	= 105295	43 (0.780)					coding (89/720 nt)	cynT	carbonic anhydrase

TGATCTATGGCCCGTGCGTGTCATCTAAAACCCTGCATAGCCTGAATCTTTCACCGGTAAAATGGATTTACCTACACACCGTCAAGAGGATGAATCATGCCCGTCAAGGACCCATCCAAGGTCGTACCGCAGGTCCCCGCGGAAAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/105111‑105259 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaagcgcAGGAAGCCGTCGACGATGTGCTTGAGGGCAGCATCGGCGCTTTCCGCGGGGACCTGCGGTACGACCTTGGATGGGTCCTTGACGGGCATGATTCATCCTCTTGACGGTGTGTAGGTAAATCCATTTTACCGGTGAAAGATT  <  NC_002947/105295‑105155                                                                                                                                                                                                                                                                                                    TGATCTATGGCCCGTGCGTGTCATCTAAAACCCTGCATAGCCTGAATCTTTCACCGGTAAAATGGATTTACCTACACACCGTCAAGAGGATGAATCATGCCCGTCAAGGACCCATCCAAGGTCGTACCGCAGGTCCCCGCGGAAAGCG                                                                                                                                                <  8:76165/148‑1                                   GCATAGCCTGAATCTTTCACCGGTAAAATGGATTTACCTACACACCGTCAAGAGGATGAATCATGCCCGTCAAGGACCCATCCAAGGTCGTACCGCAGGTCCCCGCGGAAAGCGCAGGAAGCCGTCGACGATGTGCTTGAGGGCAGCAT                                                                                                             >  2:67109/1‑149                                                   TCACCGGTAAAATGGATTTACCTACACACCGTCAAGAGGATGAATCATGCCCGTCAAGGACCCATCCAAGGTCGTACCGCAGGTCCCCGCGGAAAGCGCAGGAAGCCGTCGACGATGTGCTTGAGGGCAGCATCGGCGCTTTCCGCGG                                                                                              <  1:67109/148‑1                                                      CCGGTAAAATGGATTTACCTACACACCGTCAAGAGGATGAATCATGCCCGTCAAGGACCCATCCAAGGTCGTACCGCAGGTCCCCGCGGAAAGCGCAGGAAGCCGTCGACGATGTGCTTGAGGGCAGCATCGGCGCTTTCCGCGGGGAC                                                                                          <  6:221432/149‑1                                                            AAATGGATTTACCTACACACCGTCAAGAGGATGAATCATGCCCGTCAAGGACCCATCCAAGGTCGTACCGCAGGTCCCCGCGGAAAGCGCAGGAAGCCGTCGACGATGTGCTTGAGGGCAGCATCGGCGCTTTCCG                                                                                                 <  5:225862/136‑1                                                            AAATGGATTTACCTACACACCGTCAAGAGGATGAATCATGCCCGTCAAGGACCCATCCAAGGTCGTACCGCAGGTCCCCGCGGAAAGCGCAGGAAGCCGTCGACGATGTGCTTGAGGGCAGCATCGGCGCTTTCCG                                                                                                 >  6:225862/1‑136                                                                                                                                              GAAAGCGCAGGAAGCCGTCGACGATGTGCTTGAGGGCAGCATCGGCGCTTTCCGCGGGGACCTGCGGTACGACCTTGGATGGGTCCTTGACGGGCATGATTCATCCTCTTGACGGTGTGTAGGTAAATCCATTTTACCGGTGAAAGATT  >  2:19907/1‑149                                                                                                                                                                                                                                                                                                    TGATCTATGGCCCGTGCGTGTCATCTAAAACCCTGCATAGCCTGAATCTTTCACCGGTAAAATGGATTTACCTACACACCGTCAAGAGGATGAATCATGCCCGTCAAGGACCCATCCAAGGTCGTACCGCAGGTCCCCGCGGAAAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/105111‑105259 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaagcgcAGGAAGCCGTCGACGATGTGCTTGAGGGCAGCATCGGCGCTTTCCGCGGGGACCTGCGGTACGACCTTGGATGGGTCCTTGACGGGCATGATTCATCCTCTTGACGGTGTGTAGGTAAATCCATTTTACCGGTGAAAGATT  <  NC_002947/105295‑105155

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.