| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 224928 | 60 (1.020) | 5 (0.090) | 5/238 | NT | 8.6% | intergenic (+15/+103) | PP_0172/PP_0173 | ABC transporter permease/transcriptional factor‑like protein |
| ? | NC_002947 | = 225023 | 51 (0.930) | intergenic (+110/+8) | PP_0172/PP_0173 | ABC transporter permease/transcriptional factor‑like protein | |||||
CAGAACCGCAACGAACTGTATACCGACAAGGTCTTTGCCGGGTTGGCGGTGGTGATCCTGATCGGTCTGCTGGTGGAAGGACTGGTGTTCAATACGCTGGAGCGGTTGACTGTGCGGCGATGGGGGATGCAGCGCTAGCAGGTAAGCCAGTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/224776‑224928‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccagtacAGGGTCTTTCGCGGCGGTTCGGCGCCTCGCGCCTCTTTCAAGGACGAAGATCCCGCAGATGCGGACTCTAGCGTCAATCTGCCGCGAAAAGGCCGGTACTGGCTTACCTGCTAGCGCTGCATCCCCCATCGCCGCACAGTCAAC < NC_002947/225023‑224880 CAGAACCGCAACGAACTGTATACCGACAAGGTCTTTGCCGGGTTGGCGGTGGTGATCCTGATCGGTCTGCTGGTGGAAGGACTGGTGTTCAATACGCTGGAGCGGTTGACTGTGCGGCGATGGGGGATGCAGCGCTAGCAGGTAAGCC < 5:391066/148‑1 ACCGCAACGAACTGTATACCGACAAGGTCTTTGCCGGGTTGGCGGTGGTGATCCTGATCGGTCTGCTGGTGGAAGGACTGGTGTTCAATACGCTGGAGCGGTTGACTGTGCGGCGATGGGGGATGCAGCGCTAGCAGGTAAGCCAGTAC > 2:371955/1‑149 TATACCGACAAGGTCTTTGCCGGGTTGGCGGTGGTGATCCTGATCGGTCTGCTGGTGGAAGGACTGGTGTTCAATACGCTGGAGCGGTTGACTGTGCGGCGATGGGGGATGCAGCGCTAGCAGGTAAGCCAGTACAGGGTCTTTCGCGG > 6:256888/1‑149 GTTGACTGTGCGGCGATGGGGGATGCAGCGCTAGCAGGTAAGCCAGTACAGGGTCTTTCGCGGCGGTTCGGCGCCTCGCGCCTCTTTCAAGGACGAAGATCCCGCAGATGCGGACTCTAGCGTCAATCTGCCGCGAAAAGGCCG < 7:190158/144‑1 GTTGACTGTGCGGCGATGGGGGATGCAGCGCTAGCAGGTAAGCCAGTACAGGGTCTTTCGCGGCGGTTCGGCGCCTCGCGCCTCTTTCAAGGACGAAGATCCCGCAGATGCGGACTCTAGCGTCAATCTGCCGCGAAAAGGCCG > 8:190158/1‑144 ACTGTGCGGCGATGGGGGATGCAGCGCTAGCAGGTAAGCCAGTACAGGGTCTTTCGCGGCGGTTCGGCGCCTCGCGCCTCTTTCAAGGACGAAGATCCCGCAGATGCGGACTCTAGCGTCAATCTGCCGCGAAAAGGCCGGTACTGGCT < 6:92680/149‑1 TGCGGCGATGGGGGATGCAGCGCTAGCAGGTAAGCCAGTACAGGGTCTTTCGCGGCGGTTCGGCGCCTCGCGCCTCTTTCAAGCACGAAGATCCCGCAGATGCGGACTCTAGCGTCAATCTGCCGCGAAAAGGCCGGTACTGGCTTA < 5:256888/147‑1 GCCAGTACAGGGTCTTTCGCGGCGGTTCGGCGCCTCGCGCCTCTTTCAAGGACGAAGATCCCGCAGATGCGGACTCTAGCGTCAATCTGCCGCGAAAAGGCCGGTACTGGCTTACCTGCTAGCGCTGCATCCCCCATCGCCGCACAGT > 1:371955/1‑148 CCAGTACAGGGTCTTTCGCGGCGGTTCGGCGCCTCGCGCCTCT > 7:336548/1‑43 CCAGTACAGGGTCTTTCGCGGCGGTTCGGCGCCTCGCGCCTCT < 8:336548/43‑1 CAGTACAGGGTCTTTCGCGGCGGTTCGGCGCCTCGCGCCTCTTTCAAGGACGAAGATCCCGCAGATGCGGACTCTAGCGTCAATCTGCCGCGAAAAGGCCGGTACTGGCTTACCTGCTAGCGCTGCATCCCCCATCGCCGCACAGTCAA < 4:264833/149‑1 AGTACAGGGTCTTTCGCGGCGGTTCGGCGCCTCGCGCCTCTCTCAAGGACGAAGATCCCGCAGATGCGGACTCTAGCGTCAATCTGCCGCGAAAAGGCCGGTACTGGCTTACCTGCTAGCGCTGCATCCCCCATCGCCGCACAGTCAAC < 7:111151/149‑1 CAGAACCGCAACGAACTGTATACCGACAAGGTCTTTGCCGGGTTGGCGGTGGTGATCCTGATCGGTCTGCTGGTGGAAGGACTGGTGTTCAATACGCTGGAGCGGTTGACTGTGCGGCGATGGGGGATGCAGCGCTAGCAGGTAAGCCAGTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/224776‑224928‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccagtacAGGGTCTTTCGCGGCGGTTCGGCGCCTCGCGCCTCTTTCAAGGACGAAGATCCCGCAGATGCGGACTCTAGCGTCAATCTGCCGCGAAAAGGCCGGTACTGGCTTACCTGCTAGCGCTGCATCCCCCATCGCCGCACAGTCAAC < NC_002947/225023‑224880 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |