| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 531496 = | 74 (1.250) | 5 (0.090) | 3/246 | NT | 7.0% | coding (461/750 nt) | coaX | type III pantothenate kinase |
| ? | NC_002947 | 531549 = | 61 (1.070) | coding (514/750 nt) | coaX | type III pantothenate kinase | |||||
GAGCCTGCTCAAGCTGGGTGTAGGCAAAGCCCTGGAGCATCAATACGCAACCGCGCTCTACCGCTTCGACAGTCGAGCGACCTGGTGACAAGCTGCTCAATGCGCGCTCCGCGGAGGCATCGTCATAGCGGATCCGACGGGTGTGAGTGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/531648‑531496‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcaTTGAGCAGCTTGTCACCAGGTCGCTCGACTGTCGAAGCGGTAGAGCGCGGTTGCGTATTGATGCTCCAGGGCTTTGCCTACACCCAGCTTGAGCAGGCTCGTGTGCTATGGGGTGAGGAGTTCACCGTGTTCCTCACTGGCGGTGATG > NC_002947/531549‑531696 GAGCCTGCTCAAGCTGGGTGTAGGCAAAGCCCTGGAGCATCAATACGCAACCGCGCTCTACCGCTTCGACAGTCGAGCGACCTGGTGACAAGCTGCTCAATGCGCGCTCCGCGGAGGCATCGTCATAGCGGATCCGACGGGTGTGAGTG > 5:179698/1‑149 ATGCGCGCTCCGCGGAGGCATCGTCATAGCGGATCCGACGGGTGTGAGTGCGCATTGAGCAGCTTGTCACCAGGTCGCTCGACTGTCGAAGCGGTAGAGCGCGGTTGCGTATTGATGCTCCAGGGCTTTGCCTACACCCAGCTTGAG > 2:265079/1‑147 ATGCGCGCTCCGCGGAGGCATCGTCATAGCGGATCCGACGGGTGTGAGTGCGCATTGAGCAGCTTGTCACCAGGTCGCTCGACTGTCGAAGCGGTAGAGCGCGGTTGCGTATTGATGCTCCAGGGCTTTGCCTACACCCAGCTTGAG > 3:321935/1‑147 ATGCGCGCTCCGCGGAGGCATCGTCATAGCGGATCCGACGGGTGTGAGTGCGCATTGAGCAGCTTGTCACCAGGTCGCTCGACTGTCGAAGCGGTAGAGCGCGGTTGCGTATTGATGCTCCAGGGCTTTGC > 1:258430/1‑131 ATGCGCGCTCCGCGGAGGCATCGTCATAGCGGATCCGACGGGTGTGAGTGCGCATTGAGCAGCTTGTCACCAGGTCGCTCGACTGTCGAAGCGGTAGAGCGCGGTTGCGTATTGATGCTCCAGGGCTTTGC < 2:258430/131‑1 CGCGCTCCGCGGAGGCATCGTCATAGCGGATCCGACGGGTGTGAGTGCGCATTGAGCAGCTTGTCACCAGGTCGCTCGACTGTCGAAGCGGTAGAGCGCGGTTGCGTATTGATGCTCCAGGGCTTTGCCTACACCCAGCTTGAGCAGG < 1:265079/148‑1 GCATTGAGCAGCTTGTCACCAGGTCGCTCGACTGTCGAAGCGGTAGAGCGCGGTTGCGTATTGATGCTCCAGGGCTTTGCCTACACCCAGCTTGAGCAGGCTCGTGTGCTATGGGGTGAGGAGTTCACCGTGTTCCTCACTGGCGGTGA > 3:217540/1‑149 GCATTGAGCAGCTTGTCACCAGGTCGCTCGACTGTCGAAGCGGTAGAGCGCGGTTGCGTATTGATGCTCCAGGGCTTTGCCTACACCCAGCTTGAGCAGGCTCGTGTGCTATGGGGTGAGGAGTTCACCGTGTTCCTCACTGGCGGTGA > 4:141320/1‑149 GCATTGAGCAGCTTGTCACCAGGTCGCTCGACTGTCGAAGCGGTAGAGCGCGGTTGCGTATTGATGCTCCAGGGCTTTGCCTACACCCAGCTTGAGCAGGCTCGTGTGCTATGGGGTGAGGAGTTCACCGTGTTCCTCACTGGCGGTGA < 8:122394/149‑1 CATTGAGCAGCTTGTCACCAGGTCGCTCGACTGTCGAAGCGGTAGAGCGCGGTTGCGTATAGATGCTCCAGGGCTTTGCCTACACCCAGCTTGAGCAGGCTCGTGTGCTATGGGGTGAGGAGTTCACCGTGTTCCTCACTGGCGGTGAT < 4:161907/149‑1 ATTGAGCAGCTTGTCACCAGGTCGCTCGACTGTCGAAGCGGTAGAGCGCGGTTGCGTATTGATGCTCCAGGGCTTTGCCTACACCCAGCTTGAGCAGGCTCGTGTGCTATGGGGTGAGGAGTTCACCGTGTTCCTCACTGGCGGTGATG > 2:126285/1‑149 GAGCCTGCTCAAGCTGGGTGTAGGCAAAGCCCTGGAGCATCAATACGCAACCGCGCTCTACCGCTTCGACAGTCGAGCGACCTGGTGACAAGCTGCTCAATGCGCGCTCCGCGGAGGCATCGTCATAGCGGATCCGACGGGTGTGAGTGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/531648‑531496‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcaTTGAGCAGCTTGTCACCAGGTCGCTCGACTGTCGAAGCGGTAGAGCGCGGTTGCGTATTGATGCTCCAGGGCTTTGCCTACACCCAGCTTGAGCAGGCTCGTGTGCTATGGGGTGAGGAGTTCACCGTGTTCCTCACTGGCGGTGATG > NC_002947/531549‑531696 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |