| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 535620 | 68 (1.150) | 4 (0.070) | 4/240 | NT | 6.1% | coding (55/696 nt) | rplA | 50S ribosomal protein L1 |
| ? | NC_002947 | = 535662 | 59 (1.060) | coding (97/696 nt) | rplA | 50S ribosomal protein L1 | |||||
AGCCAAACAGGCTGACCTGACTGCCGCTGACCTGGACGCTGCTGTACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/535467‑535620‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcaggcaGCGAGGCCAGCAGAGTTGCCGCTTCTTCGAAGTTGTAGGCCTTGCCTGCTTCGATTTTCTCGGCGATTGCCTTTTGGCGTTTGGTCAGCTTAGCCATTACACACCCTCCACGTTCAGGCCCATGCTGCGGGCAGAGCCAGCGATGG < NC_002947/535662‑535517 AGCCAAACAGGCTGACCTGACTGCCGCTGACCTGGACGCTGCTGTACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGC < 4:129803/149‑1 CCAAACAGGCTGACCTGACTGCCGCTGACCTGGACGCTGCTGTACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAG < 5:335327/149‑1 AAACAGGCTGACCTGACTGCCGCTGACCTGGACGCTGCTGTACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGG > 2:214365/1‑148 AAACAGGCTGACCTGACTGCCGCTGACCTGGACGCTGCTGTACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGG > 3:192720/1‑148 GCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAGCGAGGCCAGCAGAGTTGCCGCTTCTTCGAAGTTGTAGGCCTTGCCTGCTTCG < 2:351204/148‑1 CTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAGCGAGGCCAGCAGAGTTGCCGCTTCTTCGAAGTTGTAGGCCTTGCCTGCTTCGAT < 3:57772/149‑1 CAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAGCGAGGCCAGCAGAGTTGCCGCTTCTTCGAAGTTGTAGGCCTTGCCTGCTT < 1:181256/92‑1 CAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAGCGAGGCCAGCAGAGTTGCCGCTTCTTCGAAGTTGTAGGCCTTGCCTGCTT > 2:181256/1‑92 GGCAGCGAGGCCAGCAGAGTTGCCGCTTCTTCGAAGTTGTAGGCCTTGCCTGCTTCGATTTTCTCGGCGATTGCCTTTTGGCGTTTGGTCAGCTTAGCCATTACACACCCTCCACGTTCAGGCCCATGCTGCGGGCAGAGCCAGCGATG > 1:169681/1‑149 GCAGCGAGGCCAGCAGAGTTGCCGCTTCTTCGAAGTTGTAGGCCTTGCCTGCTTCGATTTTCTCGGCGATTGCCTTTTGGCGTTTGGTCAGCTTAGCCATTACACACCCTCAACGTTCAGGCCCATGCTGCGGGCAGAGCCAGCGATGG > 6:83412/1‑149 AGCGAGGCCAGCAGAGTTGCCGCTTCTTCGAAGTTGTAGGCCTTGCCTGCTTCGATTTTCTCGGCGATTGCCTTTTGGCGTTTGGTCAGCTTAGCCATTACACACCCTCCA < 5:47647/111‑1 AGCGAGGCCAGCAGAGTTGCCGCTTCTTCGAAGTTGTAGGCCTTGCCTGCTTCGATTTTCTCGGCGATTGCCTTTTGGCGTTTGGTCAGCTTAGCCATTACACACCCTCCA > 6:47647/1‑111 AGCCAAACAGGCTGACCTGACTGCCGCTGACCTGGACGCTGCTGTACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/535467‑535620‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcaggcaGCGAGGCCAGCAGAGTTGCCGCTTCTTCGAAGTTGTAGGCCTTGCCTGCTTCGATTTTCTCGGCGATTGCCTTTTGGCGTTTGGTCAGCTTAGCCATTACACACCCTCCACGTTCAGGCCCATGCTGCGGGCAGAGCCAGCGATGG < NC_002947/535662‑535517 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |