New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 535620	68 (1.150)	4 (0.070)	4/240	NT	6.1%	coding (55/696 nt)	rplA	50S ribosomal protein L1
	?	NC_002947	= 535662	59 (1.060)					coding (97/696 nt)	rplA	50S ribosomal protein L1

CAGGCTGACCTGACTGCCGCTGACCTGGACGCTGCTGTACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTACCGTGCTGCCACACG  >  NC_002947/535474‑535767                                                                                                                                                   |                                                                                                                                                    cAGGCTGACCTGACTGCCGCTGACCTGGACGCTGCTGTACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAg                                                                                                                                                   <  6:355931/149‑1 (MQ=255)   ggCTGACCTGACTGCCGCTGACCTGGACGCTGCTGTACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGc                                                                                                                                                 >  8:25635/1‑149 (MQ=255)    gCTGACCTGACTGCCGCTGACCTGGACGCTGCTGTACGCACTATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGcc                                                                                                                                                <  6:95636/149‑1 (MQ=255)           tgacTGCCGCTGACCTGGACGCTGCTGTACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAACGAAATCGCCGAGAAAATCGAAGCAGGACAGGCCTACAACt                                                                                                                                         >  8:260592/1‑149 (MQ=255)             acTGCCGCTGACCTGGACGCTGCTGTACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTc                                                                                                                                       <  7:62528/149‑1 (MQ=255)               tGCCGCTGACCTGGACGCTGCTGTACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTc                                                                                                                                       >  1:192385/1‑147 (MQ=255)               tGCCGCTGACCTGGACGCTGCTGTACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTc                                                                                                                                       <  2:192385/147‑1 (MQ=255)                gCCGCTGACCTGGACGCTGCTGTACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCAAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCg                                                                                                                                      >  7:67834/1‑147 (MQ=255)                 ccGCTGACCTGGACGCTGCTGTACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCgaa                                                                                                                                    <  5:341105/148‑1 (MQ=255)                 ccGCTGACCTGGACGCTGCTGTACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCgaa                                                                                                                                    <  1:214365/148‑1 (MQ=255)                 ccGCTGACCTGGACGCTGCTGTACGCACCATCGCTGGCTCTCCCCGCACCATGGCCCTGACCGTGGAGGGTCTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCATTCGCCTAGAAAATCGAAGCAGGCAAGGCCTACAACTTCg                                                                                                                                      >  1:223649/1‑146 (MQ=255)                   gCTGACCTGGACGCTGCTGTACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACCTc                                                                                                                                       >  4:9725/1‑143 (MQ=255)                   gCTGACCTGGACGCTGCTGTACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACCTc                                                                                                                                       <  3:9725/143‑1 (MQ=255)                       aCCTGGACGCTGCTGTACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCAAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGc                                                                                                                               <  8:67834/147‑1 (MQ=255)                            gACGCTGCTGTACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCaa                                                                                                                          <  8:14932/147‑1 (MQ=255)                               gctgctGTACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTctg                                                                                                                     >  3:344234/1‑149 (MQ=255)                               gctgctGTACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTCAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTctg                                                                                                                     >  1:171263/1‑149 (MQ=255)                                   ctgTACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTctgctg                                                                                                                  <  3:363315/148‑1 (MQ=255)                                   ctgTACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTctgct                                                                                                                   <  4:192720/147‑1 (MQ=255)                                    tgTACGCACGATCGCTGGCTATGCCCGCAGCATTGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGc                                                                                                                <  8:147516/149‑1 (MQ=255)                                      tACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGc                                                                                                                >  7:147516/1‑147 (MQ=255)                                      tACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCt                                                                                                              >  2:169681/1‑149 (MQ=255)                                         gCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGc                                                                                                           <  5:40093/149‑1 (MQ=255)                                         gCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGc                                                                                                           >  8:308226/1‑149 (MQ=255)                                            ccATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTTGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCtgc                                                                                                        >  6:83412‑M2/1‑146 (MQ=255)                                             cATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCtgcc                                                                                                       >  1:169681‑M2/1‑145 (MQ=255)                                                 gCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTc                                                                                                                                       <  3:260038/113‑1 (MQ=255)                                                 gCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTc                                                                                                                                       >  4:260038/1‑113 (MQ=255)                                                   tGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCtgctgc                                                                                                 <  7:260592/149‑1 (MQ=255)                                                     gCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAgcgaggccagcagagttgccgcttcttcgaagttgtaggccttgcctgcttcg                                                                                                <  2:351204‑M1/148‑54 (MQ=255)                                                      ctctGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAgcgaggccagcagagttgccgcttcttcgaagttgtaggccttgcctgcttcgat                                                                                              <  3:57772‑M1/149‑56 (MQ=255)                                                       tctGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAg                                                                                             >  4:358645/1‑149 (MQ=255)                                                             cGCAGCATGGGCCTGAACGTGGAGGGTTTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTtcgtc                                                                                       <  5:277363/149‑1 (MQ=255)                                                             cGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTtcgtc                                                                                       <  7:172280/149‑1 (MQ=255)                                                             cGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTtcgtc                                                                                       >  6:373524/1‑149 (MQ=255)                                                               cagcaTGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGa                                                                                     <  4:344234/149‑1 (MQ=255)                                                                   aTGGGCCTCAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTcc                                                                                 <  2:171263/149‑1 (MQ=255)                                                                       gCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTAc                                                                              >  1:362900/1‑148 (MQ=255)                                                                         cTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGa                                                                            >  6:62438/1‑148 (MQ=255)                                                                                tGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCt                                                                                                          >  6:47647‑M2/1‑110 (MQ=255)                                                                                tGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCt                                                                                                          <  5:47647‑M2/111‑2 (MQ=255)                                                                                   aGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGtt                                                                  >  6:85081/1‑148 (MQ=255)                                                                                     ggTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAAc                                                               <  7:25635/149‑1 (MQ=255)                                                                                        gtgtAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTc                                                            >  8:103929/1‑149 (MQ=255)                                                                                         tgtAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAAct                                                                                                                        >  3:43743/1‑88 (MQ=255)                                                                                         tgtAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAAct                                                                                                                        <  4:43743/88‑1 (MQ=255)                                                                                              tGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGtt                                                      <  5:85081/149‑1 (MQ=255)                                                                                                gCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTg                                                     <  7:308226/148‑1 (MQ=255)                                                                                                 cTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGAc                                                   >  6:372473/1‑149 (MQ=255)                                                                                                 cTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGAc                                                   <  2:362900/149‑1 (MQ=255)                                                                                                  tAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGgt                                                         <  8:335452/142‑1 (MQ=255)                                                                                                  tAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGgt                                                         >  7:335452/1‑142 (MQ=255)                                                                                                    aGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCATTCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGAccc                                                 <  5:180102/148‑1 (MQ=255)                                                                                                      cTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATc                                                                        <  2:178389/123‑1 (MQ=255)                                                                                                      cTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATc                                                                        >  1:178389/1‑123 (MQ=255)                                                                                                      cTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCcgcg                                              <  5:62438/149‑1 (MQ=255)                                                                                                       tGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCcgcg                                              >  5:53270/1‑148 (MQ=255)                                                                                                         aCCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTa                                            >  7:258569/1‑148 (MQ=255)                                                                                                           cAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAgcgaggccagcagagttgccgcttcttcgaagttgtaggccttgcctgctt                                                                                                  >  2:181256‑M1/1‑41 (MQ=255)                                                                                                           cAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAgcgaggccagcagagttgccgcttcttcgaagttgtaggccttgcctgctt                                                                                                  <  1:181256‑M1/92‑52 (MQ=255)                                                                                                           cAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAAt                                         >  2:124891/1‑149 (MQ=255)                                                                                                                   aaaaGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCcgc                                               <  7:317926/135‑1 (MQ=255)                                                                                                                   aaaaGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCcgc                                               >  8:317926/1‑135 (MQ=255)                                                                                                                   aaaaGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAg                                 >  1:19603/1‑149 (MQ=255)                                                                                                                   aaaaGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAg                                 >  3:227397/1‑149 (MQ=255)                                                                                                                   aaaaGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAg                                 >  3:124935/1‑149 (MQ=255)                                                                                                                    aaaGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAgg                                >  7:157314/1‑149 (MQ=255)                                                                                                                          aaTCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCcgc                                               >  1:355778/1‑128 (MQ=255)                                                                                                                          aaTCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCcgc                                               <  2:355778/128‑1 (MQ=255)                                                                                                                            tCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTcgtacgt                        <  7:103929/149‑1 (MQ=255)                                                                                                                                 gagaAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGAc                                                                           <  5:246548/93‑1 (MQ=255)                                                                                                                                 gagaAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGAc                                                                           >  6:246548/1‑93 (MQ=255)                                                                                                                                 gagaAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAgcgc                   >  3:8629/1‑149 (MQ=255)                                                                                                                                       aTCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCtgcctgcttcgattttctcggcgattgccttttggcgtttggtcagcttagccattacacaccctccacgttcaggcccatgctgcgggcagag             <  3:57772‑M2/149‑95 (MQ=255)                                                                                                                                        tCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTACCGtg            <  4:124935/149‑1 (MQ=255)                                                                                                                                         cGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCtgcctgcttcgattttctcggcgattgccttttggcgtttggtcagcttagccattacacaccctccacgttcaggcccatgctgcgggcagagc            <  2:351204‑M2/148‑96 (MQ=255)                                                                                                                                          gAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTACCGtgct          <  5:373524/149‑1 (MQ=255)                                                                                                                                           aaGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCtgcctgcttcgattttctcggcgattgccttttggcgtttg                                                                  <  1:181256‑M2/92‑42 (MQ=255)                                                                                                                                           aaGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCtgcctgcttcgattttctcggcgattgccttttggcgtttg                                                                  >  2:181256‑M2/1‑51 (MQ=255)                                                                                                                                           aaGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAgcgc                   >  2:205831/1‑139 (MQ=255)                                                                                                                                           aaGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAgcgc                   <  1:205831/139‑1 (MQ=255)                                                                                                                                            aGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTACCGtgctgc        >  4:122418/1‑149 (MQ=255)                                                                                                                                             gCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTACCGtgctgc        >  3:161102/1‑148 (MQ=255)                                                                                                                                                ggcagcgaggccagcagagttgccgcttcttcgaagttgtaggccttgcctgcttcgattttctcggcgattgccttttggcgtttggtcagcttagccattacacaccctccacgttcaggcccatgctgcgggcagagccagcgatg    >  1:169681‑M1/1‑4 (MQ=255)                                                                                                                                                ggCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTACCGTGCTGCcaca    <  5:372473/149‑1 (MQ=255)                                                                                                                                                ggCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTACCGTGCTGCcaca    >  3:293112/1‑149 (MQ=255)                                                                                                                                                 gcagcgaggccagcagagttgccgcttcttcgaagttgtaggccttgcctgcttcgattttctcggcgattgccttttggcgtttggtcagcttagccattacacaccctcaacgttcaggcccatgctgcgggcagagccagcgatgg   >  6:83412‑M1/1‑3 (MQ=255)                                                                                                                                                 gCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTACCGTGCTGCCacac   >  8:152424/1‑149 (MQ=255)                                                                                                                                                 gCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTACCGTGCTGCCacac   <  3:358645/149‑1 (MQ=255)                                                                                                                                                  cAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTACCGTGCTGCCACACg  <  1:124891/149‑1 (MQ=255)                                                                                                                                                   agcgaggccagcagagttgccgcttcttcgaagttgtaggccttgcctgcttcgattttctcggcgattgccttttggcgtttggtcagcttagccattacacaccctcca                                       >  6:47647‑M1/1‑1 (MQ=255)                                                                                                                                                   agcgaggccagcagagttgccgcttcttcgaagttgtaggccttgcctgcttcgattttctcggcgattgccttttggcgtttggtcagcttagccattacacaccctcca                                       <  5:47647‑M1/111‑111 (MQ=255)                                                                                                                                                   |                                                                                                                                                    CAGGCTGACCTGACTGCCGCTGACCTGGACGCTGCTGTACGCACCATCGCTGGCTCTGCCCGCAGCATGGGCCTGAACGTGGAGGGTGTGTAATGGCTAAGCTGACCAAACGCCAAAAGGCAATCGCCGAGAAAATCGAAGCAGGCAAGGCCTACAACTTCGAAGAAGCGGCAACTCTGCTGGCCTCGCTGCCTGCTGCCAAGTTCGTCGAGTCCTACGACATCGCCGTTAACCTCGGTGTTGACCCGCGTAAATCCGACCAGGTCGTACGTAGCGCTACCGTGCTGCCACACG  >  NC_002947/535474‑535767

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.