| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 707669 = | 53 (0.900) | 3 (0.050) | 3/238 | NT | 5.3% | coding (71/1539 nt) | murJ | lipid II flippase |
| ? | NC_002947 | 707709 = | 57 (1.040) | coding (111/1539 nt) | murJ | lipid II flippase | |||||
CTGGGTCTTGTACTCGGCCAGAATCGGCACGAAGGCCTGGGAGAATGCGCCTTCGGCGAAGATGCGCCGCAACAGGTTGGGCAGTTTGAACGCGATGAAGAAGGCATCGGTAGCGACACCAGCACCAAAGATGCGGGCCAGGATGGTGTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/707820‑707669‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtgtcgcTACCGATGCCTTCTTCATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCGAGTACAAGACCCAGCAGGGCGAGGAGGCGACGCGCACCTTCATTGCCTAT > NC_002947/707709‑707856 CTGGGTCTTGTACTCGGCCAGAATCGGCACGAAGGCCTGGGAGAATGCGCCTTCGGCGAAGATGCGCCGCAACAGGTTGGGCAGTTTGAACGCGATGAAGAAGGCATCGGTAGCGACACCAGCCCCAAAGATGCGGGCCAGGATGGTGT > 7:142979/1‑149CTGGGTCTTGTACTCGGCCAGAATCGGCACGAAGGCCTGGGAGAATGCGCCTTCGGCGAAGATGCGCCGCAACAGGTTGGGCAGTTTGAACGCGATGAAGAAGGCATCGGTAGCGACACCAGCACCAAATATGCGGGCCAGGATGGT < 2:372672/147‑1CTGGGTCTTGTACTCGGCCAGAATCGGCACGAAGGCCTGGGAGAATGCGCCTTCGGCGAAGATGCGCCGCAACAGGTTGGGCAGTTTGAACGCGATGAAGAAGGCATCGGTAGCGACACCAGCACCAAAGATGCGGGCCAGGATGGTG < 2:71758/148‑1 GGTCTTGTACTCGGCCAGAATCGGCACGAAGGCCTGGGAGAATGCGCCTTCGGCGAAGATGCGCCGCAACAGGTTGGGCAGTTTGAACGCGATGAAGAAGGCATCGGTAGCGACACCAGCACCAAAGATGCGGGCCAGGATGGTGTCGC > 3:21487/1‑149 ACTCGGCCAGAATCGGCACGAAGGCCTGGGAGAATGCGCCTTCGGCGAAGATGCGCCGCAACAGGTTGGGCAGTTTGAACGCGATGAAGAAGGCATCGGTAGCGACACCAGCACCAAAGATGCGGGCCAGGATGGTGTCGC < 3:313745/141‑1 ACTCGGCCAGAATCGGCACGAAGGCCTGGGAGAATGCGCCTTCGGCGAAGATGCGCCGCAACAGGTTGGGCAGTTTGAACGCGATGAAGAAGGCATCGGTAGCGACACCAGCACCAAAGATGCGGGCCAGGATGGTGTCGC > 4:313745/1‑141 ATCGGTAGCGACACCAGCACCAAAGATGCGGGCCAGGATGGTGTCGCTACCGATGCCTTCTTCATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCA > 6:93771/1‑122 ATCGGTAGCGACACCAGCACCAAAGATGCGGGCCAGGATGGTGTCGCTACCGATGCCTTCTTCATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCA < 5:93771/122‑1 GCGACACCAGCACCAAAGATGCGGGCCAGGATGGTGTCGCTACCGATGCCTTCTTCATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCGAGTACAAGACC > 5:341278/1‑149 GTGTCGCTACCGATGCCTTCTTCCTCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCTATTCTGGCCGAGTACAAGACCCAGCAGGGCGAGGAGGCGACGCGCACCTTCATT < 1:235363/149‑1 GTGTCGCTACCGATGCCTTCTTCATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCGAGTACAAGACCCAGCAGGGCGAGGAGGCGACGCGCACCTTCATT < 1:236025/149‑1 GTGTCGCTACCGATGCCTTCTTCATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCGAGTACAAGACCCAGCAGGGCGAGGAGGCGACGCGCACCTTCATT > 7:26877/1‑149 GTGTCGCTACCGATGCCTTCTTCATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCGAGTACAAGACCCAGCAGGGCGAGGAGGCGACGCGCACCTTCAT < 1:71758/148‑1 GTCGCTACCGATGCCTTCTTCATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCGAGTACAAGACCCAGCAGGGCGAG > 8:146052/1‑126 GTCGCTACCGATGCCTTCTTCATCCCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCGAGTACAAGACCCAGCAGGGCGAG < 7:146052/126‑1 TCGCTACCGATGCCTTCTTCATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCGAGTACAAGACCCAGCAGGGCGAGGAGGCGACGCGCACCTTCATTGC < 2:216130/148‑1 GCTACCGATGCCTTCTTCATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCGAGTACAAGACCCAGCAGGGCGAGGAGGCGACGC > 2:211603/1‑133 GCTACCGATGCCTTCTTCATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCGAGTACAAGACCCAGCAGGGCGAGGAGGCGACGC < 1:211603/133‑1 CTACCGATGCCTTCTTCATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCGAGTACAAGACCCAGCAGGGCGAGGAGGCGACGCGCACCTTCATTGCCTAT < 4:69094/149‑1 CTACCGATGCCTTCTTCATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCGAGTACAAGACCCAGCAGGGCGAGGAGGCGACGCGCACCTTCATTGCCTAT < 4:168537/149‑1 CTACCGATGCCTTCTTCATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCGAGTACAAGACCCAGCAGGGCGAGGAGGCGACGCGCACCTTCATTGCCTAT < 6:341278/149‑1 CTACCGATGCCTTCTTCATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCGAGTACAAGACCCAGCAGGGCGAGGAGGCGACGCGCACCTTCATTGCCTAT > 7:319811/1‑149 CTACCGATGCCTTCTTCATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGT > 4:128547/1‑85 CTACCGATGCCTTCTTCATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGT < 3:128547/85‑1 CTGGGTCTTGTACTCGGCCAGAATCGGCACGAAGGCCTGGGAGAATGCGCCTTCGGCGAAGATGCGCCGCAACAGGTTGGGCAGTTTGAACGCGATGAAGAAGGCATCGGTAGCGACACCAGCACCAAAGATGCGGGCCAGGATGGTGTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/707820‑707669‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtgtcgcTACCGATGCCTTCTTCATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCGAGTACAAGACCCAGCAGGGCGAGGAGGCGACGCGCACCTTCATTGCCTAT > NC_002947/707709‑707856 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |