New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	707669 =	53 (0.900)	3 (0.050)	3/238	NT	5.3%	coding (71/1539 nt)	murJ	lipid II flippase
	?	NC_002947	707709 =	57 (1.040)					coding (111/1539 nt)	murJ	lipid II flippase

CCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCGAGTACAAGACC  >  NC_002947/707522‑707817                                                                                                                                                     |                                                                                                                                                      cccTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCCGCGTGCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTcgc                                                                                                                                                      <  3:10439/149‑1 (MQ=255) cccTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTcgc                                                                                                                                                      <  7:145233/149‑1 (MQ=255) ataggcaatgaaggtgcgcgtcgcctcctcgccctgctgggtcttgtactcggccagaatcggcacgaaggcctgggagaatgcgccttcggcgaagatgcgccgcaacaggttgggcagtttgaacgcgatgaagaaggcatcggtag                                                                                                                                                       <  4:69094‑M1/1‑1 (MQ=255) ataggcaatgaaggtgcgcgtcgcctcctcgccctgctgggtcttgtactcggccagaatcggcacgaaggcctgggagaatgcgccttcggcgaagatgcgccgcaacaggttgggcagtttgaacgcgatgaagaaggcatcggtag                                                                                                                                                       <  4:168537‑M1/1‑1 (MQ=255) ataggcaatgaaggtgcgcgtcgcctcctcgccctgctgggtcttgtactcggccagaatcggcacgaaggcctgggagaatgcgccttcggcgaagatgcgccgcaacaggttgggcagtttgaacgcgatgaagaaggcatcggtag                                                                                                                                                       <  6:341278‑M1/1‑1 (MQ=255) ataggcaatgaaggtgcgcgtcgcctcctcgccctgctgggtcttgtactcggccagaatcggcacgaaggcctgggagaatgcgccttcggcgaagatgcgccgcaacaggttgggcagtttgaacgcgatgaagaaggcatcggtag                                                                                                                                                       >  7:319811‑M1/149‑149 (MQ=255)     gcaatgaaggtgcgcgtcgcctcctcgccctgctgggtcttgtactcggccagaatcggcacgaaggcctgggagaatgcgccttcggcgaagatgcgccgcaacaggttgggcagtttgaacgcgatgaagaaggcatcggtaGCGa                                                                                                                                                    <  2:216130‑M1/4‑1 (MQ=255)      cGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGacac                                                                                                                                                 >  7:320555/1‑149 (MQ=255)       aatgaaggtgcgcgtcgcctcctcgccctgctgggtcttgtactcggccagaatcggcacgaaggcctgggagaatgcgccttcggcgaagatgcgccgcaacaggttgggcagtttgaacgcgatgaagaaggcatcggtaGCGacac                                                                                                                                                 >  7:26877‑M1/143‑149 (MQ=255)       aatgaaggtgcgcgtcgcctcctcgccctgctgggtcttgtactcggccagaatcggcacgaaggcctgggagaatgcgccttcggcgaagatgcgccgcaacaggttgggcagtttgaacgcgatgaagaaggcatcggtaGCGacac                                                                                                                                                 <  1:236025‑M1/7‑1 (MQ=255)       aatgaaggtgcgcgtcgcctcctcgccctgctgggtcttgtactcggccagaataggcacgaaggcctgggagaatgcgccttcggcgaagatgcgccgcaacaggttgggcagtttgaacgcgaggaagaaggcatcggtaGCGacac                                                                                                                                                 <  1:235363‑M1/7‑1 (MQ=255)        atgaaggtgcgcgtcgcctcctcgccctgctgggtcttgtactcggccagaatcggcacgaaggcctgggagaatgcgccttcggcgaagatgcgccgcaacaggttgggcagtttgaacgcgatgaagaaggcatcggtaGCGacac                                                                                                                                                 <  1:71758‑M1/7‑1 (MQ=255)             gcgGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGac                                                                                                                                                   >  1:275516/1‑140 (MQ=255)             gcgGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGac                                                                                                                                                   <  2:275516/140‑1 (MQ=255)             gcgGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTg                                                                                                                                          >  2:166689/1‑149 (MQ=255)             gcgGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTg                                                                                                                                          >  6:140129/1‑149 (MQ=255)                  gcgtcgcctcctcgccctgctgggtcttgtactcggccagaatcggcacgaaggcctgggagaatgcgccttcggcgaagatgcgccgcaacaggttgggcagtttgaacgcgatgaagaaggcatcggtaGc                                                                                                                                                      >  2:211603‑M1/132‑133 (MQ=255)                  gcgtcgcctcctcgccctgctgggtcttgtactcggccagaatcggcacgaaggcctgggagaatgcgccttcggcgaagatgcgccgcaacaggttgggcagtttgaacgcgatgaagaaggcatcggtaGc                                                                                                                                                      <  1:211603‑M1/2‑1 (MQ=255)                   gTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGc                                                                                                                                    <  5:65932/149‑1 (MQ=255)                            ctcgccctgctgggtcttgtactcggccagaatcggcacgaaggcctgggagaatgcgccttcggcgaagatgcgccgcaacaggttgggcagtttgaacgggatgaagaaggcatcggtaGCGac                                                                                                                                                   <  7:146052‑M1/5‑1 (MQ=255)                            ctcgccctgctgggtcttgtactcggccagaatcggcacgaaggcctgggagaatgcgccttcggcgaagatgcgccgcaacaggttgggcagtttgaacgcgatgaagaaggcatcggtaGCGac                                                                                                                                                   >  8:146052‑M1/122‑126 (MQ=255)                                ggACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTg                                                                                                                       <  2:54422/149‑1 (MQ=255)                                cgACGCTGTCTGGCTGCGGCCTCTGTCATTGGCGTGAATCTTTTCGATTAACCTGCTCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTCGGCTTTTTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTg                                                                                                                       <  2:168608/148‑1 (MQ=255)                                  aCGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGgt                                                                                                                     <  5:140129/149‑1 (MQ=255)                                        ggtcttgtactcggccagaatcggcacgaaggcctgggagaatgcgccttcggcgaagatgcgccgcaacaggttgggcagtttgaacgcgatgaagaaggcatcggtaGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGc                                                                                                                >  5:341278‑M1/110‑149 (MQ=255)                                          tGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCGTGGccc                                                                                                                                      <  4:91008/124‑1 (MQ=255)                                          tGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGccc                                                                                                                                      >  3:91008/1‑124 (MQ=255)                                          tGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTAc                                                                                                             >  2:236025/1‑149 (MQ=255)                                              aGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGAt                                                                                                         <  4:2566/149‑1 (MQ=255)                                              aGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGAt                                                                                                         >  3:301295/1‑149 (MQ=255)                                                              ggCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATcgcg                                                                                         <  1:358063/148‑1 (MQ=255)                                                               gCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGTCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGAAACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATAGCGt                                                                                        >  3:48159/1‑148 (MQ=255)                                                               gCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGc                                                                                                                <  6:27860/125‑1 (MQ=255)                                                               gCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGc                                                                                                                >  5:27860/1‑125 (MQ=255)                                                                 acgaaggcctgggagaatgcgccttcggcgaagatgcgccgcaacaggttgggcagtttgaacgcgatgaagaaggcatcggtag                                                                                                                                                       >  4:128547‑M1/85‑85 (MQ=255)                                                                 acgaaggcctgggagaatgcgccttcggcgaagatgcgccgcaacaggttgggcagtttgaacgcgatgaagaaggcatcggtag                                                                                                                                                       <  3:128547‑M1/1‑1 (MQ=255)                                                                         tttCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGAt                                                                                                         >  2:329965/1‑122 (MQ=255)                                                                         tttCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCaaa                                                                                   <  6:276212/143‑1 (MQ=255)                                                                         tttCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCaaa                                                                                   >  5:276212/1‑143 (MQ=255)                                                                          tgggagaatgcgccttcggcgaagatgcgccgcaacaggttgggcagtttgaacgcgatgaagaaggcatcggtaGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGAt                                                                                                         <  5:93771‑M1/47‑1 (MQ=255)                                                                          tgggagaatgcgccttcggcgaagatgcgccgcaacaggttgggcagtttgaacgcgatgaagaaggcatcggtaGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGAt                                                                                                         >  6:93771‑M1/76‑122 (MQ=255)                                                                             gATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAAcc                                                                         >  4:219481/1‑149 (MQ=255)                                                                                   ccTGCTCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTgc                                                                   >  8:78671/1‑149 (MQ=255)                                                                                     tGCTCAAATCCCTGGCTGCAGTAAGCTCTGATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTgcg                                                                  >  1:216130/1‑149 (MQ=255)                                                                                        tCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGt                                                                                                                           >  7:191481/1‑89 (MQ=255)                                                                                        tCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGt                                                                                                                           <  8:191481/89‑1 (MQ=255)                                                                                          aaaTCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCa                                                             >  4:142144/1‑148 (MQ=255)                                                                                          aaaTCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCAt                                                            >  8:31756/1‑149 (MQ=255)                                                                                            aTCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGc                                                                               <  5:140554/128‑1 (MQ=255)                                                                                            aTCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGc                                                                               >  6:140554/1‑128 (MQ=255)                                                                                                cTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGAt                                                                                                         <  7:35224/99‑1 (MQ=255)                                                                                                cTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGAt                                                                                                         >  8:35224/1‑99 (MQ=255)                                                                                                cTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGc                                                      >  2:57978/1‑149 (MQ=255)                                                                                                cTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGc                                                      >  4:21487/1‑149 (MQ=255)                                                                                                       cAGTAAGCTC‑GATCCCCATGATTTCGGGGGTGCTGGGCTTTGTTCGCGACAGCATCCTGGCCCGGATCTTTTGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCATACTGCCCAACGTGTTGCGGCTCATCTTCGCCGATGgc                                               <  4:48159/149‑1 (MQ=255)                                                                                                       cAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAg                                                 <  7:31756/147‑1 (MQ=255)                                                                                                       cAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAg                                                 <  1:76121/147‑1 (MQ=255)                                                                                                       cAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGgc                                               >  8:142979/1‑149 (MQ=255)                                                                                                        aGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGt                                                                                        <  3:230681/107‑1 (MQ=255)                                                                                                        aGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGt                                                                                        >  4:230681/1‑107 (MQ=255)                                                                                                          tAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATcgc                                                                                          >  8:132121/1‑103 (MQ=255)                                                                                                          tAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATcgc                                                                                          <  7:132121/103‑1 (MQ=255)                                                                                                            aGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCAt                                           <  4:301295/148‑1 (MQ=255)                                                                                                               tC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATtctc                                       >  4:136548/1‑149 (MQ=255)                                                                                                                c‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTcc                                      <  3:219481/149‑1 (MQ=255)                                                                                                                  gATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCGCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTcc                                      >  5:325770/1‑148 (MQ=255)                                                                                                                    tCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACATCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAg                                   >  3:69094/1‑149 (MQ=255)                                                                                                                       ccATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTg                                                                                <  8:143583/101‑1 (MQ=255)                                                                                                                          tGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTCTATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCtt                              <  1:303057/149‑1 (MQ=255)                                                                                                                               tCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGc                         <  1:57978/148‑1 (MQ=255)                                                                                                                               tCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGc                         <  1:166689/148‑1 (MQ=255)                                                                                                                                      tGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTg                 <  6:325770/149‑1 (MQ=255)                                                                                                                                         tGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTgg                                                                                                                      <  6:274668/46‑1 (MQ=255)                                                                                                                                           ggCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGcc              >  5:207321/1‑147 (MQ=255)                                                                                                                                           ggCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCGa            <  8:320555/149‑1 (MQ=255)                                                                                                                                                tGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCGAGTAc        <  7:78671/148‑1 (MQ=255)                                                                                                                                                   tCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCGAGTACAAGa    >  5:176135/1‑149 (MQ=255)                                                                                                                                                    cgcgACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCGAGTACAAGa    <  7:54650/148‑1 (MQ=255)                                                                                                                                                    cgcgACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCGAGTACAAGAc   >  4:4542/1‑149 (MQ=255)                                                                                                                                                    cgcgACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCAAGTACa       >  3:115166/1‑145 (MQ=255)                                                                                                                                                    cgcgACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCAAGTACa       <  4:115166/145‑1 (MQ=255)                                                                                                                                                     GCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCGAGt          <  3:313745‑M1/141‑1 (MQ=255)                                                                                                                                                     GCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCGAGt          >  4:313745‑M1/1‑141 (MQ=255)                                                                                                                                                     GCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCGAGTACAAGAcc  >  3:21487‑M1/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                      CCCTGCGAAGGCGCGGGAGTATCGCACATTCGGACGCTGTCTGGCAGCGTCCTCTGTCATTGGCGTGAATCTTTTCGATGAACCTGCTCAAATCCCTGGCTGCAGTAAGCTC‑GATCACCATGATTTCGCGGGTGCTGGGCTTTGTTCGCGACACCATCCTGGCCCGCATCTTTGGTGCTGGTGTCGCTACCGATGCCTTCTTC‑ATCGCGTTCAAACTGCCCAACCTGTTGCGGCGCATCTTCGCCGAAGGCGCATTCTCCCAGGCCTTCGTGCCGATTCTGGCCGAGTACAAGACC  >  NC_002947/707522‑707817

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.