New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 746961NA (NA)13 (0.220) 12/256 NT 23.2% intergenic (‑88/‑706) PP_0638/PP_5448 transposase/hypothetical protein
?NC_002947 = 2217636 43 (0.730)coding (539/828 nt) PP_1958 hypothetical protein

GTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/746820‑746961
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTTCATCACCCCAGCCAAGTCTTTCCAGCGACGCATCGACACCATGACCACAAGCCCTGCGGACCTCAAGAAGGACGGAGATTTCTTCTTCGATCCCAACATGCAGCTCACTGACCATCTGGAGCTGAAGGTCGCACAGA  <  NC_002947/2217636‑2217496
                                                                                                                                                                                                                                                                                           
GTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACACTTCAT                                                                                                                                        <  4:257907/149‑1
                                  ACTTTGCTGTCGGGGCGCATCATGGACGGCTGGCTACAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGTATGATGCATCCCTTAAACATCATCACCCCAGCCAAGTCTTTCAAGAGACGAATCGA                                                                                                       >  2:15629/1‑148
                                    TTTGCTGTCGGGGCGCATCATGGCGCGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACACTTCATCCCCACAGCCAAGTCTTTCCAGCGACTCATCGAAAC                                                                                                    >  6:222026/1‑149
                                           TCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACACTTCATCACCCCAGCCAAGTCTTTCCAGCGACGCATCGACACCATGAC                                                                                              >  7:191914/1‑148
                                           TCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACACTTCATCACCCCAGCCAAGTCTTTCCAGCGACGCATCGACACCATGAC                                                                                              >  8:26962/1‑148
                                                GCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACACTTCATCACCCCAGCCAAGTCTTTCCAGCGACGCATCGACACCATGACCACAAG                                                                                        <  7:26962/149‑1
                                                    ATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACACTTCATCACCCCAGCCAAGTCTTTCCAGCGACGCCTCGACACCATGACCACAAGCCCT                                                                                    >  6:172550/1‑149
                                                                  GCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACACTTCATCACCCCAGCCAAGTCTTTCCAGCGACGCATCGACACCATGACCACAAGCCCTGCGGACCTCAAGAA                                                                      <  5:172550/149‑1
                                                                    TCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACACTTCATCACCCCAGCCAAGTCTTTCCAGCGACGCATCGACACCATGACCACAAGCCCTGCGGACCTCAAGAAG                                                                     >  2:343700/1‑148
                                                                           AGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACACTTCATCACCCCAGCCAAGTCTTTCCAGCGACGCATCGACACCATGACCACAAGCCCTGCGGACATCAAGAAGGACG                                                                 >  6:209941/1‑145
                                                                                  GGGAGCACAGCATCGGTAATCAGGTGTACGGTTGGAAGTTGGGGATGATGGATCCCTTACACTTCATCACCCCAGCCAAGTCTTTGCAGCGACGCATCGACACCATGACGACAAGCCCTGCGGACCTCAAGAAGGACGGAGATTTCTTC                                                      <  5:222026/149‑1
                                                                                    GAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACACTTCATCACCCCAGCCAAGTCTTTCCAGCGACGCATCGACACCATGACCACAAGCCCTGCGGACCTCAAGAAGGACGGAGATTTCTTCTT                                                    <  8:191914/149‑1
                                                                                          AGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAC                                                                                                                                             >  7:219297/1‑54
                                                                                          AGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTACAC                                                                                                                                             <  8:219297/54‑1
                                                                                                                                      TCCCTTACACTTCATCACCCCAGCCAAGTCTTTCCAGCGACGCATCGACACCATGACCACAAGCCCTGCGGACCTCAAGAAGGACGGAGATTTCTTCTTCGATCCCAACATGCAGCTCACTGACCATCTGGAGCTGAAGGTCGCACAGA  <  5:209941/149‑1
                                                                                                                                                                                                                                                                                           
GTCCACGGGCTTGGGGTAGAGGTAGACTTTTTCGACTTTGCTGTCGGGGCGCATCATGGCGGGCTGGCTCCAGAAAGAAATCGGGAGCACAGCATCGGGAATCAGGTGGACGGTTGGAATGTGGGGATGATGGATCCCTTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/746820‑746961
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTTCATCACCCCAGCCAAGTCTTTCCAGCGACGCATCGACACCATGACCACAAGCCCTGCGGACCTCAAGAAGGACGGAGATTTCTTCTTCGATCCCAACATGCAGCTCACTGACCATCTGGAGCTGAAGGTCGCACAGA  <  NC_002947/2217636‑2217496

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.