| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 785785 = | 52 (0.880) | 4 (0.070) | 4/244 | NT | 7.3% | coding (141/3831 nt) | PP_0672 | sensory box protein |
| ? | NC_002947 | 785818 = | 52 (0.920) | coding (108/3831 nt) | PP_0672 | sensory box protein | |||||
GCAGGATCAACGCTTGACCAACCTTACTCATCCGTCGTCATTGCGTTCCGCCCCACAAGCACCCGCGACTCTCCTGCGCGGGTCGATCAAGGGTGCGCTGGCGCTGCTGGCCCTGATCCTGCTGGGCCTGCTGCTGTGGCAGCTGTTCGCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/785938‑785785‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccagCAGGATCAGGGCCAGCAGCGCCAGCGCACCCTTGATCGACCCGCGCAGGAGAGTCGCGGGTGCTTGTGGGGCGGAACGCAATGACGACGGATGAGTAAGGTTGGTCAAGCGTTGATCCTGCGATTGGGCTGGCGATGGCAGGGAATGA > NC_002947/785818‑785965 atctgcaCAACGGTTGACCAACGTTACTCCTCCGTCGTCATTGCGTTCCGCCGCACAAGCACCCGCGACTCTCCTGCGCGGGTCGATCAAGGGTGCGCTGGCGCTGCTGGCCCTGATCCTGCTGGGCCTGCTGCTGTGGCAGCTGTTCG < 1:283205/142‑1 CAGGATCAACGCTTGACCAACCTTACTCATCCGTCGTCATTGCGTTCCGCCCCACAAGCACCCGCGACTCTCCTGCGCGGGTCGATCAAGGGTGCGCTGGCGCTGCTGGCCCTGATCCTGCTGGGCCTGCTGCTGTGGCAGCTGTTCGC > 6:212556/1‑149 AGGATCAACGCTTGACCAACCTTACTCATCCGTCGTCATTGCGTTCCGCCCCACAAGCACCCGCGACTCTCCTGCGCGGGTCGATCAAGGGTGCGCTGGCGCTGCTGGCCCTGATCCTGCTGGGCCTGCTGCTGTGGCAGCTGTTCGCC > 2:258898/1‑149 TGCTGGGCCTGCTGCTGTGGCAGCTGTTCGCCCAGCAGGATCAGGGCCAGCAGCGCCAGCGCACCCTTGATCGACCCGCGCAGGAGAGTCGCGGGTGCTTGTGGGGCGG < 3:187068/109‑1 TGCTGGGCCTGCTGCTGTGGCAGCTGTTCGCCCAGCAGGATCAGGGCCAGCAGCGCCAGCGCACCCTTGATCGACCCGCGCAGGAGAGTCGCGGGTGCTTGTGGGGCGG > 4:187068/1‑109 GGCCTGCTGCTGTGGCAGCTGTTCGCCCAGCAGGATCAGGGCCAGCAGCGCCAGCGCACCCTTGATCGACCCGCGCAGGAGAGTCGCGGGTGCTTGTGGGGCGGAACGCAAT > 7:306360/1‑112 GGCCTGCTGCTGTGGCAGCTGTTCGCCCAGCAGGATCAGGGCCAGCAGCGCCAGCGCACCCTTGATCGACCCGCGCAGGAGAGTCGCGGGTGCTTGTGGGGCGGAACGCAAT < 8:306360/112‑1 CCAGCAGGATCAGGGCCAGCAGCGCCAGCGCACCCTTGATCGACCCGCGCAGGAGAGTCGCGGGTGCTTGTGGGGCGGAACGCAATGACGACGGATGAGTAAGGTTGGTCAAGCGTTGATCCTGCGATTGGGCTGGCGATGGCAGGGAA > 6:32140/1‑149 GCAGGATCAGGGCCAGCAGCGCCAGCGCACCCTTGATCGACCCGCGCAGGAGAGTCGCGGGTGCTTGTGGGGCGGAACGCAATGACGACGGATGAGTAAGGTTGGTCAAGCGTTGATCCTGCGATTGGGCTGGCGATGGCAGGGAATGA < 3:159916/149‑1 GCAGGATCAACGCTTGACCAACCTTACTCATCCGTCGTCATTGCGTTCCGCCCCACAAGCACCCGCGACTCTCCTGCGCGGGTCGATCAAGGGTGCGCTGGCGCTGCTGGCCCTGATCCTGCTGGGCCTGCTGCTGTGGCAGCTGTTCGCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/785938‑785785‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccagCAGGATCAGGGCCAGCAGCGCCAGCGCACCCTTGATCGACCCGCGCAGGAGAGTCGCGGGTGCTTGTGGGGCGGAACGCAATGACGACGGATGAGTAAGGTTGGTCAAGCGTTGATCCTGCGATTGGGCTGGCGATGGCAGGGAATGA > NC_002947/785818‑785965 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |