New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1243942 =	54 (0.910)	3 (0.050)	3/246	NT	5.5%	coding (543/675 nt)	rnt	ribonuclease T
	?	NC_002947	1243990 =	52 (0.920)					coding (495/675 nt)	rnt	ribonuclease T

GCCACAACAGCAGCTTCGACCTGGGTTTCCTCAATGCAGCAGTGGCGCGCAATGACCTGAAGCGCAACCCGTTCCACCCGTTCTCCAGCTTCGACACCGCCACCCTGGCGGGCCTGGCGTATGGCCAGACCGTGCTGGCGCGGGCCTGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1244093‑1243942 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagGGTGGCGGTGTCGAAGCTGGAGAACGGGTGGAACGGGTTGCGCTTCAGGTCATTGCGCGCCACTGCTGCATTGAGGAAACCCAGGTCGAAGCTGCTGTTGTGGCCGACCAGAATCGCCCGCTTGCAGCCGTTGGCCTTGAGTGCC  >  NC_002947/1243990‑1244134                                                                                                                                                                                                                                                                                                           GCCACAACAGCAGCTTCGACCTGGGTTTCCTCAATGCAGCAGTGGCGCGCAATGACCTGAAGCGCAACCCGTTCCACCCGTTCTCCAGCTTCGACACCGCCACCCTGGCGGGCCTGGCGTATGGCCAGACCGTGCTGGCGCGGGCCTGC                                                                                                                                                      <  5:78446/149‑1   CACAACAGCAGCTTCGACCTGGGTTTCCTCAATGCAGCAGTGGCGCGCAATGACCTGAAGCGCAACCCGTTCCACCCGTTCTCCAGCTTCGACCCCGCCACCCTGGCGGGCCTGGCGTATGGCCAGACCGTGCTGGCGCGGGCCTGC                                                                                                                                                      >  7:79300/1‑147    ACAACAGCAGCTTCGACCTGGGTTTCCTCAATGCAGCAGTGGCGCGCAATGACCTGAAGCGCAACCCGTTCCACCCGTTCTCCAGCTTCGACACCGCCACCCTGGCGGGCCTGGCGTATGGCCAGACCGTGCTGGCGCGGGCCTGC                                                                                                                                                      >  6:79887/1‑146    ACAACAGCAGCTTCGACCTGGGTTTCCTCAATGCAGCAGTGGCGCGCAATGACCTGAAGCGCAACCCGTTCCACCCGTTCTCCAGCTTCGACACCGCCACCCTGGCGGGCCTGGCGTATGGCCAGACCGTGCTGGCCCGGGCCTGC                                                                                                                                                      >  3:1896/1‑146                                                                                                        CCTGGCGGGCCTGGCGTATGGCCAGACCGTGCTGGCGCGGGCCTGCCAGGGTGGCGGTGTCGAAGCTGGAGAACGGGTGGAACGGGTTGCGCTTCAGGTCATTGCGCGCCACTGCTGCATTGAGGAAACCCAGGTCGAAGCTGCTGTTG                                               >  6:335094/1‑149                                                                                                          TGGCGGGCCTGGCGTATGGCCAGACCGTGCTGGCGCGGGCCTGCCAGGGTGGCGGTGTCGAAGCTGGAGAACGGGTGGAACGGGTTGCGCTTCAGGTCATTGCGCGCCACTGCTG                                                                               <  3:352905/115‑1                                                                                                          TGGCGGGCCTGGCGTATGGCCAGACCGTGCTGGCGCGGGCCTGCCAGGGTGGCGGTGTCGAAGCTGGAGAACGGGTGGAACGGGTTGCGCTTCAGGTCATTGCGCGCCACTGCTG                                                                               >  4:352905/1‑115                                                                                                                                                     CCAGGGTGGCGGTGTCGAAGCTGGAGAACGGGTGGAACGGGTTGCGCTTCAGGTCATTGCGCGCCACTGCTGCATTGAGGAAACCCAGGTCGAAGCTGCTGTTGTGGCCGACCAGAATCGCCCGCTTGCAGCCGTTGGCCTTGAGTGCC  <  5:335094/149‑1                                                                                                                                                                                                                                                                                                           GCCACAACAGCAGCTTCGACCTGGGTTTCCTCAATGCAGCAGTGGCGCGCAATGACCTGAAGCGCAACCCGTTCCACCCGTTCTCCAGCTTCGACACCGCCACCCTGGCGGGCCTGGCGTATGGCCAGACCGTGCTGGCGCGGGCCTGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1244093‑1243942 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagGGTGGCGGTGTCGAAGCTGGAGAACGGGTGGAACGGGTTGCGCTTCAGGTCATTGCGCGCCACTGCTGCATTGAGGAAACCCAGGTCGAAGCTGCTGTTGTGGCCGACCAGAATCGCCCGCTTGCAGCCGTTGGCCTTGAGTGCC  >  NC_002947/1243990‑1244134

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.